Contig 005514:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044D22Sequence641013374 (6)gb|EYU31798.1|3e-36hypothetical protein MIMGU_mgv1a005120mg [Erythranthe guttata]604005514 (4)ref|XP_010646607.1|9e-82PREDICTED: uncharacterized protein LOC100255620 isoform X2 [Vitis vinifera]
JMSF023F10Sequence667018915795005514 (4)ref|XP_010646607.1|2e-144PREDICTED: uncharacterized protein LOC100255620 isoform X2 [Vitis vinifera]
JMSF036P09Sequence594013374 (6)gb|EYU31798.1|3e-35hypothetical protein MIMGU_mgv1a005120mg [Erythranthe guttata]728005514 (4)ref|XP_010646607.1|2e-125PREDICTED: uncharacterized protein LOC100255620 isoform X2 [Vitis vinifera]
JMSF045M18Sequence687013374 (6)ref|XP_009589340.1|209PREDICTED: uncharacterized protein LOC104086723 [Nicotiana tomentosiformis] ref|729005514 (4)ref|XP_002280425.1|3e-113PREDICTED: uncharacterized protein LOC100255620 isoform X1 [Vitis vinifera] ref

Alignment

This contig is upended


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rJMSF023F10+                                                GCCTTATGATGAGCCTAGAAGG
                      ____________________________________________________________
consensus                                                   GCCTTATGATGAGCCTAGAAGG
 
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rJMSF045M18+                                                      AGCACAATACAGCATT
rJMSF023F10+          AATGGGAAAGTTCCTAAGATATTGACACACAGGTTATTCCNTCAAGCACAATACAGCATT
rJMSF036P09+                                                      AGCACNATACAGCATT
                      ____________________________________________________________
consensus             AATGGGAAAGTTCCTAAGATATTGACACACAGGTTATTCCNTCAAGCACAATACAGCATT
 
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rJMSF045M18+          TGGATTGATGGTAAAATGGAGTTAATAGTTGATCCCATTGCTTATGCCTGAAAAGATACT
rJMSF023F10+          TGGATTGATGGTAAAATGGAGTTAATAGTTGAT-CCATTGCTTATGCTTG-AAAGATACT
rJMSF036P09+          TGGATTGATGGTAAAATGGAGTTAATAGTTGAT-CCATNGCTTATGCCTG-AAAGATACT
                      ____________________________________________________________
consensus             TGGATTGATGGTAAAATGGAGTTAATAGTTGAT-CCATTGCTTATGCCTG-AAAGATACT
 
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rJMSF045M18+          TGTGGCGTGGCAAGCATACATTTGCAATAGCTCAGCACAAGCATCATCAGAGTATATATG
rJMSF023F10+          TGTGGCGTGGCAAGCATACATTTGCAATAGCTCAGCACAAGCATCATCAGAGTATATATG
rJMSF036P09+          TGTGGCGTGGCAAGCATACATTTGCAATAGCTCAGCACAAGCATCATCAGAGTATATATG
                      ____________________________________________________________
consensus             TGTGGCGTGGCAAGCATACATTTGCAATAGCTCAGCACAAGCATCATCAGAGTATATATG
 
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rJMSF045M18+          AGGAGGCTGATTCAAACAAACGGAGAAAACGTTATGCTCGACCACTTCTTGATCTTCAAA
rJMSF023F10+          AGGAGGCTGATTCAAACAAACGGAGAAAACGTTATGCTCGACCACTTCTTGATCTTCAAA
rJMSF036P09+          AGGAGGCTGATTCAAACAAACGGAGAAAACGTTATGCTCGACCACTTCTTGATCTTCAAA
rJMFF044D22+                                                                 TCAAA
                      ____________________________________________________________
consensus             AGGAGGCTGATTCAAACAAACGGAGAAAACGTTATGCTCGACCACTTCTTGATCTTCAAA
 
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rJMSF045M18+          TGAAAATATATCGTTATGAGGGACTGGAACCATGGAATCCAAATAAAGGCATAGTTAGTG
rJMSF023F10+          TGAAAATATATCGTTATGAGGGACTGGAACCATGGAATCCAAATAAAGGCATAGTTAGTG
rJMSF036P09+          TGAAAATATATCGTTATGAGGGACTGGAACCATGGAATCCAAATAAAGGCATAGTTAGTG
rJMFF044D22+          TGAAAATATATCGTTATGAGGGACTGGAACCATGGAATCCAAATAAAGGCATAGTTAGTG
                      ____________________________________________________________
consensus             TGAAAATATATCGTTATGAGGGACTGGAACCATGGAATCCAAATAAAGGCATAGTTAGTG
 
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rJMSF045M18+          ATGTTCCGGAAGGAGCAGTTATTGTACGGGAACACACTGCAATGAACAACTTGTTTAGTT
rJMSF023F10+          ATGTTCCGGAAGGAGCAGTTATTGTACGGGAACACACTGCAATGAACAACTTGTTTAGTT
rJMSF036P09+          ATGTTCCGGAAGGAGCAGTTATTGTACGGGAACACACTGCAATGAACAACTTGTTTAGTT
rJMFF044D22+          ATGTTCCGGAAGGAGCAGTTATTGTACGGGAACACACTGCAATGAACAACTTGTTTAGTT
                      ____________________________________________________________
consensus             ATGTTCCGGAAGGAGCAGTTATTGTACGGGAACACACTGCAATGAACAACTTGTTTAGTT
 
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rJMSF045M18+          GCTTATGGTTCAACGAAGTCAACTTGTTCACACCACGAGACCAGCTGAGCTTCGGGTATG
rJMSF023F10+          GCTTATGGTTCAACGAAGTCAACTTGTTCACACCACGAGACCAGCTGAGCTTCGGGTATG
rJMSF036P09+          GCTTATGGTTCAACGAAGTCAACTTGTTCACACCACGAGACCAGCTGAGCTTCGGGTATG
rJMFF044D22+          GCTTATGGTTCAACGAAGTCAACTTGTTCACACCACGAGACCAGCTGAGCTTCGGGTATG
                      ____________________________________________________________
consensus             GCTTATGGTTCAACGAAGTCAACTTGTTCACACCACGAGACCAGCTGAGCTTCGGGTATG
 
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rJMSF045M18+          TTGTTTACAGGCTGGGGGGCAAGTTCAAATTTTTAATGTTTCCAAACTGTGAATACAACT
rJMSF023F10+          TTGTTTACAGGCTGGGGGGCAAGTTCAAATTTTTAATGTTTCCAAACTGTGAATACAACT
rJMSF036P09+          TTGTTTACAGGCTGGGGGGCAAGTTCAAATTTTTAATGTTTCCAAACTGTGAATACAACT
rJMFF044D22+          TTGTTTACAGGCTGGGGGGCAAGTTCAAATTTTTAATGTTTCCAAACTGTGAATACAACT
                      ____________________________________________________________
consensus             TTGTTTACAGGCTGGGGGGCAAGTTCAAATTTTTAATGTTTCCAAACTGTGAATACAACT
 
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rJMSF045M18+          CCATCTTTATTTTACACCCTCATACGCGGGAGCATTCATCTAAAGTGGAGTGGGTGAAAT
rJMSF023F10+          CCATCTTTATTTTACACCCTCATACGCGGGAGCATTCATCTAAAGTGGAGTGGGTGAAAT
rJMSF036P09+          CCATCTTTATTTTACACCCTCATACGCGGGAGCATTCATCTAAAGTGGAGTGGGTGAAAT
rJMFF044D22+          CCATCTTTATTTTACACCCTCATACGCGGGAGCATTCATCTAAAGTGGAGTGGGTGAAAT
                      ____________________________________________________________
consensus             CCATCTTTATTTTACACCCTCATACGCGGGAGCATTCATCTAAAGTGGAGTGGGTGAAAT
 
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rJMSF045M18+          CTTTGGATGAATTTAAGAAGGATAGTAGTGGTTTGAAAGAGAGTAGAGGAGGGTTTGGAT
rJMSF023F10+          CTTTGGATGAATTTAAGAAGGATAGTAGTGGTTTGAAAGAGAGTAGAGGAGGGTTTGGAT
rJMSF036P09+          CTTTGGATGAATTTAAGAAGGATAGTAGTGGTTTGAAAGAGAGTAGAGGAGGGTTTGGAT
rJMFF044D22+          CTTTGGATGAATTTAAGAAGGATAGTAGTGGTTTGAAAGAGAGTAGAGGAGGGTTTGGAT
                      ____________________________________________________________
consensus             CTTTGGATGAATTTAAGAAGGATAGTAGTGGTTTGAAAGAGAGTAGAGGAGGGTTTGGAT
 
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rJMSF045M18+          TGTGGACCCCTTATCCGGGGAATCTGAAATCAGTTGTATTACCACATGTAACAAGAAAAT
rJMSF023F10+          TGTGGACCCCTTATCCGGGGAATCTGAAATCAGTTGTATTACCACATGTAACAAGAAAAT
rJMSF036P09+          TGTGGACCCCTTATCCGGGGAATCTGAAATCAGTTGTATTACCACATGTAACAAGAAAAT
rJMFF044D22+          TGTGGACCCCTTATCCGGGGAATCTGAAATCAGTTGTATTACCACATGTAACAAGAAAAT
                      ____________________________________________________________
consensus             TGTGGACCCCTTATCCGGGGAATCTGAAATCAGTTGTATTACCACATGTAACAAGAAAAT
 
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rJMSF045M18+          CAAAAGCTGGATGATGATGATGATGATGATGATGATGATGATGATGTTTGTAATGGTGTT
rJMSF023F10+          CAAAAGCTGGATGATGATGATGATGATGATGATGATGATGATGATGTTTGTAATGGTGTT
rJMSF036P09+          CAAAAGCTGGATGATGATGATGATGATGATGATGATGATGATGATGTTTGTAATGGTGTT
rJMFF044D22+          CAAAAGCTGGATGATGATGATGATGATGATGATGATGATGATGATGTTTGTAATGGTGTT
                      ____________________________________________________________
consensus             CAAAAGCTGGATGATGATGATGATGATGATGATGATGATGATGATGTTTGTAATGGTGTT
 
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rJMSF045M18+          ATTTTTGTAGCTCTTAGAGAAA-CGGTTGGGATTCCTCAGAAAGGAGAGGT         
rJMSF023F10+          ATTTTTGTAGCTCTTAGAGAAACCGGTTGGGATTCCTCAGAAAGGAGAGGT         
rJMSF036P09+          ATTTTTGTAGCTCTTAGAGAAA-CGGTTGGGATTCCTCAGAAAGGAGAGGT         
rJMFF044D22+          ATTTTTGTAGCTCTTAGAGAAA-CGGTTGGGATTCCTCAGAAAGGAGAGGTTGTTCCTTC
                      ____________________________________________________________
consensus             ATTTTTGTAGCTCTTAGAGAAA-CGGTTGGGATTCCTCAGAAAGGAGAGGTTGTTCCTTC
 
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rJMFF044D22+          AATTCTCCAAACAATTTGAATCATTTCTTCTGGAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             AATTCTCCAAACAATTTGAATCATTTCTTCTGGAAAAAAAAAAAAAAAACTCTCCAGGGT