| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023M01 | Sequence | 271 | 010544 (6) | 682 | 005511 (5) | ref|XP_009630634.1| | 1e-82 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment | |||
| JMFF044B09 | Sequence | 635 | 010544 (6) | ref|XP_009630634.1| | 5e-44 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment | 623 | 005511 (5) | ref|XP_006339841.1| | 2e-56 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Solanum tuberosum] |
| JMSF002B14 | Sequence | 239 | 010544 (6) | 699 | 005511 (5) | ref|XP_009630634.1| | 1e-89 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment | |||
| JMSF023D21 | Sequence | 606 | 010544 (6) | ref|XP_009630634.1| | 2e-36 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment | 697 | 005511 (5) | ref|XP_009630634.1| | 1e-89 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment |
| JMSF033I19 | Sequence | 650 | 010544 (6) | ref|XP_009630634.1| | 2e-41 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment | 720 | 005511 (5) | ref|XP_009630634.1| | 8e-102 | PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Nicotiana toment |
This contig is upended
. : . : . : . : . : . :
rJMSF033I19+ GCT
____________________________________________________________
consensus GCT
. : . : . : . : . : . :
rJMSF033I19+ CCGCCAGTGGCAGCGCTTCGTGCTCACACGCAACCGCACCAGCCTCTTCACCTTCATCGG
rJMSF023D21+ ATCGG
rJMSF002B14+ ATCGG
____________________________________________________________
consensus CCGCCAGTGGCAGCGCTTCGTGCTCACACGCAACCGCACCAGCCTCTTCACCTTCATCGG
. : . : . : . : . : . :
rJMSF033I19+ CGCCACACGCGCCGACATCGCCGGCGACTTCCGCACCCTCCTCATCCAATACTGCCGCAA
rJMSF023D21+ CGCCACACGCGCCGACATCGCCGGCGACTTCCGCACCCTCCTCATCCAATACTGCCGCAA
rJMSF002B14+ CGCCACACGCGCCGACATCGCCGGCGACTTCCGCACCCTCCTCATCCAATACTGCCGCAA
rJMFF023M01+ TCCTCATCCAATACTGCCGCAA
____________________________________________________________
consensus CGCCACACGCGCCGACATCGCCGGCGACTTCCGCACCCTCCTCATCCAATACTGCCGCAA
. : . : . : . : . : . :
rJMSF033I19+ CGAGTCCGACGCGTGCCGCGTCGTCGACTGCGCGGTGACTCAGTGCTCCAACGGCTCCTC
rJMSF023D21+ CGAGTCCGACGCGTGCCGCGTCGTCGACTGCGCGGTGACTCAGTGCTCCAACGGCTCCTC
rJMSF002B14+ CGAGTCCGACGCGTGCCGCGTCGTCGACTGCGCGGTGACTCAGTGCTCCAACGGCTCCTC
rJMFF023M01+ CGAGTCCGACGCGTGCCGCGTCGTCGACTGCGCGGTGACTCAGTGCTCCAACGGCTCCTC
____________________________________________________________
consensus CGAGTCCGACGCGTGCCGCGTCGTCGACTGCGCGGTGACTCAGTGCTCCAACGGCTCCTC
. : . : . : . : . : . :
rJMSF033I19+ CGCCATCCAAGCGTCGTTCCTCAGCTCCGACTTCTGCCTGCAGCCCAAAGGCGACAGCAT
rJMSF023D21+ CGCCATCCAAGCGTCGTTCCTCAGCTCCGACTTCTGCCTGCAGCCCAAAGGCGACAGCAT
rJMSF002B14+ CGCCATCCAAGCGTCGTTCCTCAGCTCCGACTTCTGCCTGCAGCCCAAAGGCGACAGCAT
rJMFF023M01+ CGCCATCCAAGCGTCGTTCCTCAGCTCCGACTTCTGCCTGCAGCCCAAAGGCGACAGCAT
rJMFF044B09+ CTGCAGCCCAAAGGCGACAGCAT
____________________________________________________________
consensus CGCCATCCAAGCGTCGTTCCTCAGCTCCGACTTCTGCCTGCAGCCCAAAGGCGACAGCAT
. : . : . : . : . : . :
rJMSF033I19+ GACCCGCCGGTCGGTCTTCGACTGCATGATCGCCGGTTCAGTCCCGGTCTTTTTCTGGCG
rJMSF023D21+ GACCCGCCGGTCGGTCTTCGACTGCATGATCGCCGGTTCAGTCCCGGTCTTTTTCTGGCG
rJMSF002B14+ GACCCGCCGGTCGGTCTTCGACTGCATGATCGCCGGTTCAGTCCCGGTCTTTTTCTGGCG
rJMFF023M01+ GACCCGCCGGTCGGTCTTCGACTGCATGATCGCCGGTTCAGTCCCGGTCTTTTTCTGGCG
rJMFF044B09+ GACCCGCCGGTCGGTCTTCGACTGCATGATCGCCGGTTCAGTCCCGGTCTTTTTCTGGCG
____________________________________________________________
consensus GACCCGCCGGTCGGTCTTCGACTGCATGATCGCCGGTTCAGTCCCGGTCTTTTTCTGGCG
. : . : . : . : . : . :
rJMSF033I19+ CAAAACGGCCTACGCTCAGTACCAGTGGTTCTTGCCGGAGGACCCGGCGAGCTACTCGGT
rJMSF023D21+ CAAAACGGCCTACGCTCAGTACCAGTGGTTCTTGCCGGAGGACCCGGCGAGCTACTCGGT
rJMSF002B14+ CAAAACGGCCTACGCTCAGTACCAGTGGTTCTTGCCGGAGGACCCGGCGAGCTACTCGGT
rJMFF023M01+ CAAAACGGCCTACGCTCAGTACCAGTGGTTCTTGCCGGAGGACCCGGCGAGCTACTCGGT
rJMFF044B09+ CAAAACGGCCTACGCTCAGTACCAGTGGTTCTTGCCGGAGGACCCGGCGAGCTACTCGGT
____________________________________________________________
consensus CAAAACGGCCTACGCTCAGTACCAGTGGTTCTTGCCGGAGGACCCGGCGAGCTACTCGGT
. : . : . : . : . : . :
rJMSF033I19+ GTTCATCGACCACGACGCCGTGAGGAACGGGACGTCCATCCGGGGAATCCTGGAACAGTA
rJMSF023D21+ GTTCATCGACCACGACGCCGTGAGGAACGGGACGTCCATCCGGGGAATCCTGGAACAGTA
rJMSF002B14+ GTTCATCGACCACGACGCCGTGAGGAACGGGACGTCCATCCGGGGAATCCTGGAACAGTA
rJMFF023M01+ GTTCATCGACCACGACGCCGTGAGGAACGGGACGTCCATCCGGGGAATCCTGGAACAGTA
rJMFF044B09+ GTTCATCGACCACGACGCCGTGAGGAACGGGACGTCCATCCGGGGAATCCTGGAACAGTA
____________________________________________________________
consensus GTTCATCGACCACGACGCCGTGAGGAACGGGACGTCCATCCGGGGAATCCTGGAACAGTA
. : . : . : . : . : . :
rJMSF033I19+ TAGCAAGGAAGATATCAGAAAAATGAGGGAAAAAGTGGTGGAAATTATACCCAAATTGAT
rJMSF023D21+ TAGCAAGGAAGATATCAGAAAAATGAGGGAAAAAGTGGTGGAAATTATACCCAAATTGAT
rJMSF002B14+ TAGCAAGGAAGATATCAGAAAAATGAGGGAAAAAGTGGTGGAAATTATACCCAAATTGAT
rJMFF023M01+ TAGCAAGGAAGATATCAGAAAAATGAGGGAAAAAGTGGTGGAAATTATACCCAAATTGAT
rJMFF044B09+ TAGCAAGGAAGATATCAGAAAAATGAGGGAAAAAGTGGTGGAAATTATACCCAAATTGAT
____________________________________________________________
consensus TAGCAAGGAAGATATCAGAAAAATGAGGGAAAAAGTGGTGGAAATTATACCCAAATTGAT
. : . : . : . : . : . :
rJMSF033I19+ CTATTCACGGCCGAAAGAGGGGCTCCCGACGGTGAAAGATGCGTTTGATATTGCGGTTGA
rJMSF023D21+ CTATTCACGGCCGAAAGAGGGGCTCCCGACGGTGAAAGATGCGTTTGATATTGCGGTTGA
rJMSF002B14+ CTATTCACGGCCGAAAGAGGGGCTCCCGACGGTGAAAGATGCGTTTGATATTGCGGTTGA
rJMFF023M01+ CTATTCACGGCCGAAAGAGGGGCTCCCGACGGTGAAAGATGCGTTTGATATTGCGGTTGA
rJMFF044B09+ CTATTCACGGCCGAAAGAGGGGCTCCCGACGGTGAAAGATGCGTTTGATATTGCGGTTGA
____________________________________________________________
consensus CTATTCACGGCCGAAAGAGGGGCTCCCGACGGTGAAAGATGCGTTTGATATTGCGGTTGA
. : . : . : . : . : . :
rJMSF033I19+ AACTCTAATGAAAAGAATCAAAGAGGAAAAGGATTGGAATGAGTTCGTGAATGACATTGA
rJMSF023D21+ AACTCTAATGAAAAGAATCAAAGAGGAAAAGGATTGGAATGAGTTCGTGAATGACATTGA
rJMSF002B14+ AACTCTAATGAAAAGAATCAAAGAGGAAAAGGATTGGAATGAGTTCGTGAATGACATTGA
rJMFF023M01+ AACTCTAATGAAAAGAATCAAAGAGGAAAAGGATTGGAATGAGTTCGTGAATGACATTGA
rJMFF044B09+ AACTCTAATGAAAAGAATCAAAGAGGAAAAGGATTGGAATGAGTTCGTGAATGACATTGA
____________________________________________________________
consensus AACTCTAATGAAAAGAATCAAAGAGGAAAAGGATTGGAATGAGTTCGTGAATGACATTGA
. : . : . : . : . : . :
rJMSF033I19+ AGAAAGAAGATGACCCGACCCGTTACCGTTCTGCAAATTTTCTTCAATTCAATGTGGAGA
rJMSF023D21+ AGAAAGAAGATGACCCGACCCGTTACCGTTCTGCAAATTTTCTTCAATTCAATGTGGAGA
rJMSF002B14+ AGAAAGAAGATGACCCGACCCGTTACCGTTCTGCAAATTTTCTTCAATTCAATGTGGAGA
rJMFF023M01+ AGAAAGAAGATGACCCGACCCGTTACCGTTCTGCAAATTTTCTTCAATTCAATGTGGAGA
rJMFF044B09+ AGAAAGAAGATGACCCGACCCGTTACCGTTCTGCAAATTTTCTTCAATTCAATGTGGAGA
____________________________________________________________
consensus AGAAAGAAGATGACCCGACCCGTTACCGTTCTGCAAATTTTCTTCAATTCAATGTGGAGA
. : . : . : . : . : . :
rJMSF033I19+ GTAATGTATATACTGCTACTCCACTCCTTGTTGTTTGTGCTTCTTACTTCTGCAATT
rJMSF023D21+ GTAATGTATATACTGCTACTCCACTCCTTGTTGTTTGTGCTTCTTACTTCTGCAATTTCC
rJMSF002B14+ GTAATGTATATACTGCTACTCCACTCCTTGTTGTTTGTGCTTCTTACTTCTGCAATTTCC
rJMFF023M01+ GTAATGTATATACTGCTACTCCACTCCTTGTTGTTTGTGCTTCTTACTTCTGCAATTTCC
rJMFF044B09+ GTAATGTATATACTGCTACTCCACTCCTTGTTGTTTGTGCTTCTTACTTCTGCAATTTCC
____________________________________________________________
consensus GTAATGTATATACTGCTACTCCACTCCTTGTTGTTTGTGCTTCTTACTTCTGCAATTTCC
. : . : . : . : . : . :
rJMSF023D21+ TTTTTTTCTTTTTTTATATATAAACTATACCC
rJMSF002B14+ TTTTTTTCTTTTTTTATATATAAACTATACCC
rJMFF023M01+ TTTTTTTCTTTTTTTATATATAAACTATACCCNTTACCCATAAC
rJMFF044B09+ TTTTTTTCTTTTTTTATATATAAACTATACCCATTACCCATAACTAGAGTATAAATGAGA
____________________________________________________________
consensus TTTTTTTCTTTTTTTATATATAAACTATACCCATTACCCATAACTAGAGTATAAATGAGA
. : . : . : . : . : . :
rJMFF044B09+ AGAAATTATTATTTTTTCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus AGAAATTATTATTTTTTCCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG