Contig 005510:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026J01Sequence496003184 (3)ref|XP_004238930.1|128PREDICTED: uncharacterized protein LOC101254996 [Solanum lycopersicum]246005510 (2)
JMFF044A22Sequence621003184 (3)ref|XP_004250038.1|8e-28PREDICTED: uncharacterized protein LOC101264582 isoform X2 [Solanum lycopersicu537005510 (2)ref|XP_007044341.1|6e-07Uncharacterized protein TCM_009867 [Theobroma cacao] gb|EOY00173.1| Uncharacteri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF044A22+ TTTTGGCAACAAACCGGCAGTGAGAATCGAGGGTTTTGATTTCCTGGACAGGGATCG
                      ____________________________________________________________
consensus TTTTGGCAACAAACCGGCAGTGAGAATCGAGGGTTTTGATTTCCTGGACAGGGATCG
 
. : . : . : . : . : . :
rJMFF044A22+ CAGGAAATGCAGCATCCCTGCACTGGCCTGAACCCAAAACCTTAAAATCCCCCAATTCCC
                      ____________________________________________________________
consensus CAGGAAATGCAGCATCCCTGCACTGGCCTGAACCCAAAACCTTAAAATCCCCCAATTCCC
 
. : . : . : . : . : . :
rJMFF026J01+ AAAAAAAAAAAAACAAGAGAACAAGGCAGATTAAGTAAATAGTGAGTCCATTAGCAGCA
rJMFF044A22+ CAAAAAAAAAAAAACAAGGGAACAAGGCCGGTTAAGTAAATAGTGAGTCCCTTAGCAGCA
                      ____________________________________________________________
consensus CAAAAAAAAAAAAACAAGGGAACAAGGCCGGTTAAGTAAATAGTGAGTCCCTTAGCAGCA
 
. : . : . : . : . : . :
rJMFF026J01+ GCAAAAAACAAGAAGAAGAATTTTTAGCAATTTCCAGATGAGATGATGAGTGAGTGAAAA
rJMFF044A22+ GCAAAAAACAAGAAGAAGGATTTTTAGCAATTTCCAGATGAGATGATGAGTGAGTGAAAA
                      ____________________________________________________________
consensus GCAAAAAACAAGAAGAAGGATTTTTAGCAATTTCCAGATGAGATGATGAGTGAGTGAAAA
 
. : . : . : . : . : . :
rJMFF026J01+ GCAGCATGATATATGATCCCTTTTGCACAGTGTAAATATGTTTAGAGGGCTGTGTTGTGC
rJMFF044A22+ ACAGCCTGATATATGATCCCTTTTGCCCAGGGTAAATATGTTTAGAGGGCTGTGTTGTGC
                      ____________________________________________________________
consensus GCAGCCTGATATATGATCCCTTTTGCCCAGTGTAAATATGTTTAGAGGGCTGTGTTGTGC
 
. : . : . : . : . : . :
rJMFF026J01+ CTGTAAGTATGATGATTATGAGAGGAGTTTAGGATTTTA
rJMFF044A22+ CCGTAAGTATGATGATTTTGAGAGGAGTTTAGGATTTTAATGATAATATTTAGTTGGGAG
                      ____________________________________________________________
consensus CTGTAAGTATGATGATTTTGAGAGGAGTTTAGGATTTTAATGATAATATTTAGTTGGGAG
 
. : . : . : . : . : . :
rJMFF044A22+ CAAAAATCCCTTTTTGTGATGTAAGTATGAATGAGGGGCGGAGGGTTTTTGAAGATTTGT
                      ____________________________________________________________
consensus CAAAAATCCCTTTTTGTGATGTAAGTATGAATGAGGGGCGGAGGGTTTTTGAAGATTTGT
 
. : . : . : . : . : . :
rJMFF044A22+ GTCCATTTTGTAGACTTTGTGTTGCAGAAATTTTGTGAAGAAAAAGTGTAGTTTGGTGTT
                      ____________________________________________________________
consensus GTCCATTTTGTAGACTTTGTGTTGCAGAAATTTTGTGAAGAAAAAGTGTAGTTTGGTGTT
 
. : . : . : . : . : . :
rJMFF044A22+ TTGAGTCCCCCGTACTCATTTCCCTTTTTAAATGGAATATAATACAGAGTTTTTTTTTGG
                      ____________________________________________________________
consensus TTGAGTCCCCCGTACTCATTTCCCTTTTTAAATGGAATATAATACAGAGTTTTTTTTTGG