Contig 005509:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043P04Sequence641004636 (16)ref|XP_008348224.1|3e-28PREDICTED: ABC transporter B family member 19-like [Malus domestica]591005509 (3)ref|NP_001234209.1|5e-34L04 [Solanum lycopersicum] gb|ABX82928.1| L04 [Solanum lycopersicum]
JMFS065G09Sequence642005509 (3)ref|XP_006338462.1|4e-77PREDICTED: ABC transporter B family member 19-like [Solanum tuberosum]
JMSF011F09Sequence399004636 (16)719005509 (3)dbj|BAF01897.1|3e-86putative P-glycoprotein [Arabidopsis thaliana]

Alignment

This contig is upended


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rJMSF011F09+                      TGAGGCTTAAAATCGGGCTAGTTCAGCAGGAGCCAGCGCTGTTCGCCG
                      ____________________________________________________________
consensus                         TGAGGCTTAAAATCGGGCTAGTTCAGCAGGAGCCAGCGCTGTTCGCCG
 
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rJMSF011F09+          CCACCATTTTCGACAACATAGCTTACGGTAAAGAGGATGCAACCGAAGCAGAAGTCACGG
JMFS065G09-                                                      CGAAGCAGAAGTCACGG
                      ____________________________________________________________
consensus             CCACCATTTTCGACAACATAGCTTACGGTAAAGAGGATGCAACCGAAGCAGAAGTCACGG
 
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rJMSF011F09+          AAGCAGCTCGCGCAGCCAACGTGCACGCCTTCGTCAGTGCATTGCCCGAAGGGTACAGAA
JMFS065G09-           AAGCAGCTCGCGCAGCCAACGTGCACGCCTTCGTCAGTGCATTGCCCGAAGGGTACAGAA
                      ____________________________________________________________
consensus             AAGCAGCTCGCGCAGCCAACGTGCACGCCTTCGTCAGTGCATTGCCCGAAGGGTACAGAA
 
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rJMSF011F09+          CGCAGGTCGGGGAGAGAGGAGTTCAGCTCTCAGGCGGCCAGAAGCAACGAATCGCCATCG
JMFS065G09-           CGCAGGTCGGGGAGAGAGGAGTTCAGCTCTCAGGCGGCCAGAAGCAACGAATCGCCATCG
                      ____________________________________________________________
consensus             CGCAGGTCGGGGAGAGAGGAGTTCAGCTCTCAGGCGGCCAGAAGCAACGAATCGCCATCG
 
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rJMSF011F09+          CCAGGGCGGTTCTCAAGAACCCCGCGATACTTCTACTAGACGAGGCCACGAGCGCACTGG
JMFS065G09-           CCAGGGCGGTTCTCAAGAACCCCGCGATACTTCTACTAGACGAGGCCACGAGCGCACTGG
                      ____________________________________________________________
consensus             CCAGGGCGGTTCTCAAGAACCCCGCGATACTTCTACTAGACGAGGCCACGAGCGCACTGG
 
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rJMSF011F09+          ACGCCGAATCAGAGTGCATGCTGCAAGAAGCGCTCGAAAGGTTGATGAGAGGCAGAACCA
JMFS065G09-           ACGCCGAATCAGAGTGCATGCTGCAAGAAGCGCTCGAAAGGTTGATGAGAGGCAGAACCA
rJMFF043P04+                  TCAGAGTGCATGCTGCAAGAAGCGCTCGAAAGGTTGATGAGAGGCAGAACCA
                      ____________________________________________________________
consensus             ACGCCGAATCAGAGTGCATGCTGCAAGAAGCGCTCGAAAGGTTGATGAGAGGCAGAACCA
 
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rJMSF011F09+          CCGTTCTGGTGGCGCACCGGTTGTCAACCGTCCGGAACGTGGACAGTATCGGCGTGGTGC
JMFS065G09-           CCGTTCTGGTGGCGCACCGGTTGTCAACCGTCCGGAACGTGGACAGTATCGGCGTGGTGC
rJMFF043P04+          CCGTTCTGGTGGCGCACCGGTTGTCAACCGTCCGGAACGTGGACAGTATCGGCGTGGTGC
                      ____________________________________________________________
consensus             CCGTTCTGGTGGCGCACCGGTTGTCAACCGTCCGGAACGTGGACAGTATCGGCGTGGTGC
 
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rJMSF011F09+          AAGACGGCCGCATTGTAGAGCACGGCAGCCATTCCGAGCTCATCAGCCGCCCAGAAGGAG
JMFS065G09-           AAGACGGCCGCATTGTAGAGCACGGCAGCCATTCCGAGCTCATCAGCCGCCCAGAAGGAG
rJMFF043P04+          AAGACGGCCGCATTGTAGAGCACGGCAGCCATTCCGAGCTCATCAGCCGCCCAGAAGGAG
                      ____________________________________________________________
consensus             AAGACGGCCGCATTGTAGAGCACGGCAGCCATTCCGAGCTCATCAGCCGCCCAGAAGGAG
 
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rJMSF011F09+          CATATTCAAGACTCTTGCAATTACAGCACCATCGCATATGATGCAGAAGGCCGCCCAATC
JMFS065G09-           CATATTCAAGACTCTTGCAATTACAGCACCATCGCATATGATGCAGAAGGCCGCCCAATC
rJMFF043P04+          CATATTCAAGACTCTTGCAATTACAGCACCATCGCATATGATGCAGAAGGCCGCCCAATC
                      ____________________________________________________________
consensus             CATATTCAAGACTCTTGCAATTACAGCACCATCGCATATGATGCAGAAGGCCGCCCAATC
 
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rJMSF011F09+          TATCGTTTCTTTCTGTCCCCCCTTGTATTAAAAGAAAAAGGCCAATCAATCTTCTTGGTA
JMFS065G09-           TATCGTTTCTTTCTGTCCCCCCTTGTATTAAAAGAAAAAGGCCAATCAATCTTCTTGGTA
rJMFF043P04+          GTTCGTTTCTTTCTGTCCCCCCTTGTATTAAAAGAAAAAGGCCAATCAATCTTCTTGGTA
                      ____________________________________________________________
consensus             TATCGTTTCTTTCTGTCCCCCCTTGTATTAAAAGAAAAAGGCCAATCAATCTTCTTGGTA
 
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rJMSF011F09+          ATGAGTGTGAGGCAACTATATATGTTCAGGTGCCATTAACAGTTCTTTGTTGATGATAAT
JMFS065G09-           ATGAGTGTGAGGCAACTATATATGTTCAGGTGCCATTAACAGTTCTTTGTTGATGATAAT
rJMFF043P04+          ATGAGTGTGAGGCAACTATATATGTTCAGGTGCCATTAACAGTTCTTTGTTGATGATAAT
                      ____________________________________________________________
consensus             ATGAGTGTGAGGCAACTATATATGTTCAGGTGCCATTAACAGTTCTTTGTTGATGATAAT
 
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rJMSF011F09+          GATTGCTGTAGATATGAAGTGCAACTCCATTTCCCAATGGAGAACCATAAAATATTCGAT
JMFS065G09-           GATTGCTGTAGATATGAAGTGCAACTCCATTTCCCAATGGAGAA-CATANAATATTCGAT
rJMFF043P04+          GATTGCTGTAGATATGAAGTGCAACTCCATTTCCCAATGGAGAA-CATAAAATATTCGAT
                      ____________________________________________________________
consensus             GATTGCTGTAGATATGAAGTGCAACTCCATTTCCCAATGGAGAA-CATAAAATATTCGAT
 
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rJMSF011F09+          GATGATGATG                                                  
JMFS065G09-           GATGATGATGATGAGCCATATCTATG                                  
rJMFF043P04+          GATGATGATGTTGAGCCATATCTATGAAGCATCATAAATCTTTTCCCTATCTGTAAAAAG
                      ____________________________________________________________
consensus             GATGATGATGTTGAGCCATATCTATGAAGCATCATAAATCTTTTCCCTATCTGTAAAAAG
 
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rJMFF043P04+          GCTGGTTGGGTGAAATGATTAACATAAATGTGTTTGCTGATATGTAATTTTTCAACCTTG
                      ____________________________________________________________
consensus             GCTGGTTGGGTGAAATGATTAACATAAATGTGTTTGCTGATATGTAATTTTTCAACCTTG
 
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rJMFF043P04+          ATGATAATATCAAGTCATCTTTTTCCTTTTGACAAAAAAAAAAAAAAAACTCTTCAGGGT
                      ____________________________________________________________
consensus             ATGATAATATCAAGTCATCTTTTTCCTTTTGACAAAAAAAAAAAAAAAACTCTTCAGGGT