Contig 005501:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035G12Sequence520005501 (4)dbj|BAP19106.1|5e-117NAC transcription factor [Ipomoea nil]704005501 (4)dbj|BAP19106.1|4e-92NAC transcription factor [Ipomoea nil]
JMFF042O11Sequence617005501 (4)dbj|BAP19106.1|1e-99NAC transcription factor [Ipomoea nil]451005501 (4)dbj|BAP19106.1|2e-31NAC transcription factor [Ipomoea nil]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-                          ATATAGCAACACTTTTTCTTTTTAACACCGCTCTTTTTTCATCTT
                      ____________________________________________________________
consensus                            ATATAGCAACACTTTTTCTTTTTAACACCGCTCTTTTTTCATCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           TTTCTGGTACAAGATTTTTCTTTTCTTCTGACCCCTTTCCAGTGAGAGAGAGAGAGATAG
                      ____________________________________________________________
consensus             TTTCTGGTACAAGATTTTTCTTTTCTTCTGACCCCTTTCCAGTGAGAGAGAGAGAGATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           TCCCAGTCTCCTTATAAATTGAACCTCTTCACACCCATACTTATCTGTTCATCATCATAA
JMFF035G12-                                                         GTTCATCATCATAA
                      ____________________________________________________________
consensus             TCCCAGTCTCCTTATAAATTGAACCTCTTCACACCCATACTTATCTGTTCATCATCATAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           TTGGGCAGTTTGTTTGATGGAGAATACCTCTGGGTTTAGTGGCGTTGAAGAAGAAATGGA
JMFF035G12-           TTGGGCAGTTTGTTTGATGGAGAATACCTCTGGGTTTAGTGGCGTTGAAGAAGAAATGGA
                      ____________________________________________________________
consensus             TTGGGCAGTTTGTTTGATGGAGAATACCTCTGGGTTTAGTGGCGTTGAAGAAGAAATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           GCTGCATATGCCTTCTGGGTTCAGATTCCATCCCACAGACGAAGAGCTCATCACCCATTA
JMFF035G12-           GCTGCATATGCCTCCTGGGTTCAGATTCCATCCCACAGACGAAGAGCTCATCAGCCATTA
                      ____________________________________________________________
consensus             GCTGCATATGCCTTCTGGGTTCAGATTCCATCCCACAGACGAAGAGCTCATCAGCCATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           CTTGTGCCCCAAGGTTGCAGATAGCAGGTTTTCTGCAGCTGCCATGGGTGAAGTGGATTT
JMFF035G12-           CTTGTGCCCCAAGGTTGCAGATAGCAGGTTTTCTGCAGCTGCCATGGGTGAAGTGGATTT
                      ____________________________________________________________
consensus             CTTGTGCCCCAAGGTTGCAGATAGCAGGTTTTCTGCAGCTGCCATGGGTGAAGTGGATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           GAACAAGGTTGAGCCCTGGGATTTGCCCTGGAGGGCGAAAATGGGGGAGAAAGAATGGTA
JMFF035G12-           GAACAAGGTTGAGCCCTGGGATTTGCCCTGGAGGGCGAAAATGGGGGAGAAAGAATGGTA
                      ____________________________________________________________
consensus             GAACAAGGTTGAGCCCTGGGATTTGCCCTGGAGGGCGAAAATGGGGGAGAAAGAATGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           TTTCTTATGTGTGAGAGACCGGAAGTATCCGACCGGGCAGAGAACTAACAGAGCGACGGA
JMFF035G12-           TTTCTTCTGTGTGAGAGACCGGAAGTATCCGACCGGGCAGAGAACTAACAGAGCGACGGA
                      ____________________________________________________________
consensus             TTTCTTCTGTGTGAGAGACCGGAAGTATCCGACCGGGCAGAGAACTAACAGAGCGACGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           AGCAGGGTATTGGAAGGCGACCGGAAAAGATAGAGAGATTTTCAGGGCGAAGACGCTGGT
JMFF035G12-           AGCAGGGTATTGGAAGGCGACCGGAAAAGATAGAGAGATTTTCAGGGCGAAGACGCTGGT
                      ____________________________________________________________
consensus             AGCAGGGTATTGGAAGGCGACCGGAAAAGATAGAGAGATTTTCAGGGCGAAGACGCTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           GGGGATGAAGAAGACGCTGGTTTTCTACAAGGGAAGAGCGCCCAAAGGCCAGAAGACCAA
JMFF035G12-           GGGGATGAAGAAGACGCTGGTTTTCTACAAGGGAAGAGCGCCCAAAGGCCAGAAGACCAA
                      ____________________________________________________________
consensus             GGGGATGAAGAAGACGCTGGTTTTCTACAAGGGAAGAGCGCCCAAAGGCCAGAAGACCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042O11-           TTGGGTTATGCATGAATATAGATTGGAGGGGA                            
JMFF035G12-           TTGGGTTATGCATGAATATAGATTGGAGGGGAACTATTCCATCCCAAACCACAAGAACGA
rJMFF035G12+             GGTTATGCATGAATATAGATTGGAGGGGAANTATTCCATCCCAAACCACAAGAACGA
                      ____________________________________________________________
consensus             TTGGGTTATGCATGAATATAGATTGGAGGGGAACTATTCCATCCCAAACCACAAGAACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035G12-           ATGGGTGATCTGCAGAGTGTTC                                      
rJMFF035G12+          ATGGGTGATCTGCAGAGTGTTCAAGAAGACTTCCGGCGNCCACAAGATCCATATTTCCGG
                      ____________________________________________________________
consensus             ATGGGTGATCTGCAGAGTGTTCAAGAAGACTTCCGGCGNCCACAAGATCCATATTTCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          GCTCACCAGGGGGGAGGGTCTGCCGGCGTTAATGGAAGTATCTGCAACTTCCGGCGAGGC
                      ____________________________________________________________
consensus             GCTCACCAGGGGGGAGGGTCTGCCGGCGTTAATGGAAGTATCTGCAACTTCCGGCGAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          GATGCCGCACGTGACCTGCTTCTCCGGCTCCAAGGAGGACAAAAAACCCATCGCTCCCCA
                      ____________________________________________________________
consensus             GATGCCGCACGTGACCTGCTTCTCCGGCTCCAAGGAGGACAAAAAACCCATCGCTCCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          TTTCTNTTCATNGAAAAANTCAGATTTTTCNGGCGTCTTCCCCAGCCTGGAATTTCAGCA
rJMFF042O11+                                         GGCGTCTTCCCCAGCCTGGAATTTCAGCA
                      ____________________________________________________________
consensus             TTTCTNTTCATNGAAAAANTCAGATTTTTCNGGCGTCTTCCCCAGCCTGGAATTTCAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          CTACTNTGAACCGGNCGACCACTCGGTTCTGCGCCTCTGGCTGGAGAACANCGGGCTGCA
rJMFF042O11+          CTACTCTGAACCGGACGACCACTCGGTTCTGCGCCTCTGGCTGGAGAACAACGGGCTGCA
                      ____________________________________________________________
consensus             CTACTCTGAACCGGACGACCACTCGGTTCTGCGCCTCTGGCTGGAGAACAACGGGCTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          AGCGAAGCAGGATAATGATGNNGATGAGTTCTTGATGAGCTCAGAAGCCGGTCCGGTGGA
rJMFF042O11+          AGCGAAGCAGGATAATGATGACGATGAGTTCTTGATGAGCTCAGAAGCCGGTCCGGTGGA
                      ____________________________________________________________
consensus             AGCGAAGCAGGATAATGATGACGATGAGTTCTTGATGAGCTCAGAAGCCGGTCCGGTGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          CNTGGATTGTCTNTGGAATTATTGAATCTGAAAAAGACAGATNGAGAGAGCAGTGATTTA
rJMFF042O11+          CCTGGATTGTCTCTGGAATTATTGAATCTGAAAAAGACAGATTGAGAGAGCAGTGATTTA
                      ____________________________________________________________
consensus             CCTGGATTGTCTCTGGAATTATTGAATCTGAAAAAGACAGATTGAGAGAGCAGTGATTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          ATGGTTGAAGATGCAGAAGAAGAAGCATGTGGATAGATAGAATTATAGAAAGAAAGAAAG
rJMFF042O11+          ATGGTTGAAGATGCAGAAGAAGAAGCATGTGGATAGATAGAATTATAGAAAGAAAGAAAG
                      ____________________________________________________________
consensus             ATGGTTGAAGATGCAGAAGAAGAAGCATGTGGATAGATAGAATTATAGAAAGAAAGAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          AACAGAGGAATGACATAGAGTGATTGTGTGATCATCAGTCCATCATCATATTGATATTGC
rJMFF042O11+          GACACAGGAATGACATAGAGTGATTGTGTGATCATCAGTCCATCATCATATTGATATTGC
                      ____________________________________________________________
consensus             GACAGAGGAATGACATAGAGTGATTGTGTGATCATCAGTCCATCATCATATTGATATTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          TGCAAATAATTTTTCTTTATGTCTATATTTTCATTAATTAAGACATGGCTGTGTTGTATT
rJMFF042O11+          TGCAAATAATTTTTCTTTATGT-TATATTTTCATTAATTAAGACATGGCTGTGTTGTATT
                      ____________________________________________________________
consensus             TGCAAATAATTTTTCTTTATGTCTATATTTTCATTAATTAAGACATGGCTGTGTTGTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF035G12+          GTATATATTTCTTGGGAAACTAATTGCTCTGATAATACAAAAATATC             
rJMFF042O11+          GTATATATTTCTTGGGAAACTAATTGCTCTGATAATACAAAAATATCAATGTTTGATTTG
                      ____________________________________________________________
consensus             GTATATATTTCTTGGGAAACTAATTGCTCTGATAATACAAAAATATCAATGTTTGATTTG