Contig 005497:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042E13Sequence659004684 (3)ref|XP_009613445.1|2e-76PREDICTED: tetrahydrocannabinolic acid synthase-like [Nicotiana tomentosiformis445005497 (2)ref|XP_011096883.1|2e-10PREDICTED: tetrahydrocannabinolic acid synthase-like [Sesamum indicum]
JMFF051J08Sequence499004684 (3)ref|XP_009613445.1|5e-51PREDICTED: tetrahydrocannabinolic acid synthase-like [Nicotiana tomentosiformis384005497 (2)

Alignment

This contig is upended


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rJMFF042E13+                                             ATGGAGAATTTTGATAGATTGGTAA
                      ____________________________________________________________
consensus                                                ATGGAGAATTTTGATAGATTGGTAA
 
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rJMFF051J08+                                              GACATGAACAGAGCATCCCCACGC
rJMFF042E13+          GGGTGAAGAGCAGAGTTGATCCTGATAACTTTTTCAGACATGAACAGAGCATCCCCACGC
                      ____________________________________________________________
consensus             GGGTGAAGAGCAGAGTTGATCCTGATAACTTTTTCAGACATGAACAGAGCATCCCCACGC
 
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rJMFF051J08+          TTCCTCTGTCCATGGAGGAGCATGGCATGGGGAAGACGATGATCCATTGAAGTATATATT
rJMFF042E13+          TTCCTCTGTCCATGGAGGAGCATGGCATGGGGAAGACGATGATCCATTGAAGTATATATT
                      ____________________________________________________________
consensus             TTCCTCTGTCCATGGAGGAGCATGGCATGGGGAAGACGATGATCCATTGAAGTATATATT
 
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rJMFF051J08+          ATTTATAGTTTACTAGCTAATTTTTATTTAAATTTCATGAGTCTTATGTTGTTAAATTTG
rJMFF042E13+          ATTTATAGTTTACTAGCTAATTTTTATTTAAATTTCATGAGTCTTATGTTGTTAAATTTG
                      ____________________________________________________________
consensus             ATTTATAGTTTACTAGCTAATTTTTATTTAAATTTCATGAGTCTTATGTTGTTAAATTTG
 
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rJMFF051J08+          GTGTAATGGATGGAAGATAAAAAAAAAAATTCCATGTAAAAATATGTTGAAAATATTTCT
rJMFF042E13+          GTGTAATGGATGGAAGATAAAAAAAAAAATTCCATGTAAAAATATGTTGAAAATATTTCT
                      ____________________________________________________________
consensus             GTGTAATGGATGGAAGATAAAAAAAAAAATTCCATGTAAAAATATGTTGAAAATATTTCT
 
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rJMFF051J08+          TTTGAATTTGGTGTAAAGGGTTGAAGATAGTCTTAATATGCTATGCACCAAATACCCATT
rJMFF042E13+          TTTGAATTTGGTGTAAAGGGTTGAAGATAGTCTTAATATGCTATGCACCAAATACCCATT
                      ____________________________________________________________
consensus             TTTGAATTTGGTGTAAAGGGTTGAAGATAGTCTTAATATGCTATGCACCAAATACCCATT
 
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rJMFF051J08+          GCTTATGTTCCTTTTTTCTTAAAAAAAAAAATTTAATCTCTTATTTACTTTCAAGTGGAA
rJMFF042E13+          GCTTATGTTCCTTTTTTCTTAAAAAAAAAAATTTAATCTCTTATTTACTTTCAAGTGGAA
                      ____________________________________________________________
consensus             GCTTATGTTCCTTTTTTCTTAAAAAAAAAAATTTAATCTCTTATTTACTTTCAAGTGGAA
 
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rJMFF051J08+          AAGCCCTTTTAATTTGTAATACTTTATGTAACAGTGAATTCCATTTTTGGTCCTACTGTT
rJMFF042E13+          AAGCCCTTTTAATTTGTAATACTTTATGTAACAGTGAATTCCATTTTTGGTCCTACTGTT
                      ____________________________________________________________
consensus             AAGCCCTTTTAATTTGTAATACTTTATGTAACAGTGAATTCCATTTTTGGTCCTACTGTT