| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006F22 | Sequence | 557 | 000602 (4) | emb|CDO99362.1| | 7e-64 | unnamed protein product [Coffea canephora] | 449 | 005494 (3) | ref|XP_004147178.1| | 64.7 | PREDICTED: ammonium transporter 1 member 1-like [Cucumis sativus] ref|XP_0041667 |
| JMFF042A10 | Sequence | 655 | 000602 (4) | emb|CDO99362.1| | 7e-86 | unnamed protein product [Coffea canephora] | 309 | 005494 (3) | |||
| JMSF030P02 | Sequence | 642 | 000602 (4) | ref|XP_006340957.1| | 173 | PREDICTED: ammonium transporter 1 member 1-like, partial [Solanum tuberosum] | 461 | 005494 (3) | ref|XP_006420410.1| | 3e-28 | hypothetical protein CICLE_v10004812mg [Citrus clementina] gb|ESR33650.1| hypoth |
This contig is upended
. : . : . : . : . : . :
rJMSF030P02+ CGGCGGGTNTGGGGCNTGGGGAATCA
____________________________________________________________
consensus CGGCGGGTNTGGGGCNTGGGGAATCA
. : . : . : . : . : . :
rJMSF030P02+ TTTTCNCCNCNCTTTTNGCCAAGGAAAAGTACGTGAACGAGGTTTACCNGGGGAAACCGG
____________________________________________________________
consensus TTTTCNCCNCNCTTTTNGCCAAGGAAAAGTACGTGAACGAGGTTTACCNGGGGAAACCGG
. : . : . : . : . : . :
rJMSF030P02+ GTNGGCCTCNCGGGCTGTTCATGGGCGGCGGCGGGAGGCTACTCGGGGCGCNCGTGATCC
____________________________________________________________
consensus GTNGGCCTCNCGGGCTGTTCATGGGCGGCGGCGGGAGGCTACTCGGGGCGCNCGTGATCC
. : . : . : . : . : . :
rJMSF030P02+ NGATTTTGGTGATATTNGGGNGGGTCNCCNCCNCCNTGGGTCCTNTGTTTTACNTTNTTC
rJMFF006F22+ GGGTCCTTTGTTTTACNTTTTTC
____________________________________________________________
consensus NGATTTTGGTGATATTNGGGNGGGTCNCCNCCNCCNTGGGTCCTTTGTTTTACNTTTTTC
. : . : . : . : . : . :
rJMSF030P02+ ATAAGCTGAAANTGCTCCGGATNTNGGAGGAAGACGAATTGGCGGGTATGGATATGACCC
rJMFF006F22+ ATAANNTGAAANTGCTCCGGATTTNGGAGGAANACGAATTGGCGGGTNTGGATNTGACCC
____________________________________________________________
consensus ATAAGCTGAAANTGCTCCGGATTTNGGAGGAAGACGAATTGGCGGGTATGGATATGACCC
. : . : . : . : . : . :
rJMSF030P02+ GACNTGGAGGGTTTGCTTATGTTTACCNTGATGAAGATGATCNCAAAACNGGGATCCAAA
rJMFF006F22+ GACNTGGNGGGTTTGNTTNTGTTTTCCNTGATGAAGATGATCCCAAAACNGGGATCCNAA
____________________________________________________________
consensus GACNTGGAGGGTTTGCTTATGTTTTCCNTGATGAAGATGATCCCAAAACNGGGATCCAAA
. : . : . : . : . : . :
rJMSF030P02+ TGAGGNGGATTGAACCCNCAGCTNTTTCAAGTTAGAAGAAATTTCAATTCCCNTA-TTTT
rJMFF006F22+ TGNGGNGGNTTGAACCCNCAGCTTTTTCAANTTNGAANAAATTTCAATTCCCATATTTTT
rJMFF042A10+ TTGAACCCCCAGCTCTTTCAAGTTAGAAGAAATTTCAATTCCCAAATTTTT
____________________________________________________________
consensus TGAGGNGGATTGAACCCCCAGCTTTTTCAAGTTAGAAGAAATTTCAATTCCCATATTTTT
. : . : . : . : . : . :
rJMSF030P02+ TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
rJMFF006F22+ TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
rJMFF042A10+ TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
____________________________________________________________
consensus TTTTTTACTTCCTTTCATTTTCATTAGAATTTTCAACGTTTGGAAAGTAGTATGCATATT
. : . : . : . : . : . :
rJMSF030P02+ AGAATTATAAAGTTT
rJMFF006F22+ AGAATTATAAAGTTTTAAAATTTATAAAAAAAAAAGGTAGTTATCATGGGAATTGAAAAT
rJMFF042A10+ AGAATTATAAAGTTTTAAAATTTATAAAAAAAAAAGGTAGTTATCATGGGAATTGAAAAT
____________________________________________________________
consensus AGAATTATAAAGTTTTAAAATTTATAAAAAAAAAAGGTAGTTATCATGGGAATTGAAAAT
. : . : . : . : . : . :
rJMFF006F22+ TCTTAATTTGTTTGTGGTTGTGGTTGTGGATGAAGATAATGAATGTCGTCTT
rJMFF042A10+ TCTTAATTTGTTTGTGGTTGTGGTTGTGGATGAAAATAATGAATGTCGTCTTCCCCTTXX
____________________________________________________________
consensus TCTTAATTTGTTTGTGGTTGTGGTTGTGGATGAAGATAATGAATGTCGTCTTCCCCTTNN
. : . : . : . : . : . :
rJMFF042A10+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAAACTCTCCAGGG
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAACTCTCCAGGG