Contig 005491:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003M01Sequence275007453 (4)ref|XP_006343987.1|5e-04PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]741005491 (5)emb|CDP09740.1|2e-81unnamed protein product [Coffea canephora]
JMFF004P16Sequence515007453 (4)ref|XP_006343987.1|1e-54PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]737005491 (5)emb|CDP09740.1|4e-87unnamed protein product [Coffea canephora]
JMFF021L17Sequence539007453 (4)ref|XP_006343987.1|3e-60PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]748005491 (5)emb|CDP09740.1|3e-82unnamed protein product [Coffea canephora]
JMFF041I07Sequence592007453 (4)ref|XP_006343987.1|8e-73PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]471005491 (5)gb|AFF18843.1|1e-25gamma-glutamylcysteine synthetase, partial [Dimocarpus longan]
JMSF034L03Sequence621018971ref|XP_006343987.1|3e-48PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Solanum tuberosum]755005491 (5)dbj|BAP47506.1|5e-112gamma-glutamylcysteine synthetase [Gentiana triflora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF034L03+ AAG
                      ____________________________________________________________
consensus AAG
 
. : . : . : . : . : . :
rJMSF034L03+ AAGTATATTGATTGTACTGGAATGTCCTTCAGGGATTTTATGGCGGGGAAACTGCCTCCT
                      ____________________________________________________________
consensus AAGTATATTGATTGTACTGGAATGTCCTTCAGGGATTTTATGGCGGGGAAACTGCCTCCT
 
. : . : . : . : . : . :
rJMSF034L03+ ATTCCTGGAGAATATCCCACACTTAATGACTGGGAGAACCATTTGACAACAATATTT-CC
rJMFF003M01+ TGGAGAATATCCCACACTTAATGACTGGGAGAACCATTTGACAACAATATTTNCC
rJMFF021L17+ ACTTAATGACTGGGAGAACCATTTGACAACAATATTTCCC
rJMFF004P16+ GGAGAACCATTTGACANCAATATTT-CC
                      ____________________________________________________________
consensus ATTCCTGGAGAATATCCCACACTTAATGACTGGGAGAACCATTTGACAACAATATTTCCC
 
. : . : . : . : . : . :
rJMSF034L03+ CGAGGTGAGACTTAAAAGGTACCTGGAAATGCGAGGGGCCGATGGAGGACCTTGGCGGCG
rJMFF003M01+ CGAGGTGAGACTTAAAAGGTACCTGGAAATGCGAGGGGCCGATGGAGGACCTTGGCGGCG
rJMFF021L17+ CGAGGTGAGACTTAAAAGGTACCTGGAAATGCGAGGGGCCGATGGAGGACCTTGGCGGCG
rJMFF004P16+ CGAGGTGAGACTTAAAAGGTACCTGGAAATGCGAGGGGCCGATGGAGGACCTTGGCGGCG
                      ____________________________________________________________
consensus CGAGGTGAGACTTAAAAGGTACCTGGAAATGCGAGGGGCCGATGGAGGACCTTGGCGGCG
 
. : . : . : . : . : . :
rJMSF034L03+ ATTATGTGCATTGCCTGCTTTCTGGGTTGGTTTATTGTATGATGATATATCTTTACAAAG
rJMFF003M01+ ATTATGTGCATTGCCTGCTTTCTGGGTTGGTTTATTGTATGATGATATATCTTTACAAAG
rJMFF021L17+ ATTATGTGCATTGCCTGCTTTCTGGGTTGGTTTATTGTATGATGATATATCTTTACAAAG
rJMFF004P16+ ATTATGTGCATTGCCTGCTTTCTGGGTTGGTTTATTGTATGATGATATATCTTTACAAAG
                      ____________________________________________________________
consensus ATTATGTGCATTGCCTGCTTTCTGGGTTGGTTTATTGTATGATGATATATCTTTACAAAG
 
. : . : . : . : . : . :
rJMSF034L03+ TGTTCTGGACATGACAGCAGATTGGACTATGGGAGAACGAGAGATGTTAAGGAATAAGGT
rJMFF003M01+ TGTTCTGGACATGACAGCAGATTGGACTATGGGAGAACGAGAGATGTTAAGGAATAAGGT
rJMFF021L17+ TGTTCTGGACATGACAGCAGATTGGACTATGGGAGAACGAGAGATGTTAAGGAATAAGGT
rJMFF004P16+ TGTTCTGGACATGACAGCAGATTGGACTATGGGAGAACGAGAGATGTTAAGGAATAAGGT
                      ____________________________________________________________
consensus TGTTCTGGACATGACAGCAGATTGGACTATGGGAGAACGAGAGATGTTAAGGAATAAGGT
 
. : . : . : . : . : . :
rJMSF034L03+ TCCTAAAAGTGGTTTGAATACACCATTTCGAGACGGTTTGCTCAAGCATGTTGCTCAAGA
rJMFF003M01+ TCCTAAAAGTGGTTTGAATACACCATTTCGAGACGGTTTGCTCAAGCATGTTGCTCAAGA
rJMFF021L17+ TCCTAAAAGTGGTTTGAATACACCATTTCGAGACGGTTTGCTCAAGCATGTTGCTCAAGA
rJMFF004P16+ TCCTAAAAGTGGTTTGAATACACCATTTCGAGACGGTTTGCTCAAGCATGTTGCTCAAGA
                      ____________________________________________________________
consensus TCCTAAAAGTGGTTTGAATACACCATTTCGAGACGGTTTGCTCAAGCATGTTGCTCAAGA
 
. : . : . : . : . : . :
rJMSF034L03+ TGTTCTGCACTTGGCGAAAGGAGGTCTGGAAAGAAGAGGCTATAAGGAAACCGGGTTTCT
rJMFF003M01+ TGTTCTGCACTTGGCGAAAGGAGGTCTGGAAAGAAGAGGCTATAAGGAAACCGGGTTTCT
rJMFF021L17+ TGTTCTGCACTTGGCGAAAGGAGGTCTGGAAAGAAGAGGCTATAAGGAAACCGGGTTTCT
rJMFF004P16+ TGTTCTGCACTTGGCGAAAGGAGGTCTGGAAAGAAGAGGCTATAAGGAAACCGGGTTTCT
rJMFF041I07+ CTTGGCGAAAGGAGGTCTGGAAAGAAGAGGCTATAAGGAAACCGGGTTTCT
                      ____________________________________________________________
consensus TGTTCTGCACTTGGCGAAAGGAGGTCTGGAAAGAAGAGGCTATAAGGAAACCGGGTTTCT
 
. : . : . : . : . : . :
rJMSF034L03+ GAATGCAGTAGCTGAAGTCGTCAACACAGGCGTGACGCCAGCCGAGAAGCTCCTGGAATT
rJMFF003M01+ GAATGCAGTAGCTGAAGTCGTCAACACAGGCGTGACGCCAGCCGAGAAGCTCCTGGAATT
rJMFF021L17+ GAATGCAGTAGCTGAAGTCGTCAACACAGGCGTGACGCCAGCCGAGAAGCTCCTGGAATT
rJMFF004P16+ GAATGCAGTAGCTGAAGTCGTCAACACAGGCGTGACGCCAGCCGAGAAGCTCCTGGAATT
rJMFF041I07+ GAATGCAGTAGCTGAAGTCGTCAACACAGGCGTGACGCCAGCCGAGAAGCTCCTGGAATT
                      ____________________________________________________________
consensus GAATGCAGTAGCTGAAGTCGTCAACACAGGCGTGACGCCAGCCGAGAAGCTCCTGGAATT
 
. : . : . : . : . : . :
rJMSF034L03+ GTACCATGGGAAATGGGGGCAAAATGTTGATCCTGTATTTGAGGAGCTGCTTTACTGAGG
rJMFF003M01+ GTACCATGGGAAATGGGGGCAAAATGTTGATCCTGTATTTGAGGAGCTGCTTTACTGAGG
rJMFF021L17+ GTACCATGGGAAATGGGGGCAAAATGTTGATCCTGTATTTGAGGAGCTGCTTTACTGAGG
rJMFF004P16+ GTACCATGGGAAATGGGGGCAAAATGTTGATCCTGTATTTGAGGAGCTGCTTTACTGAGG
rJMFF041I07+ GTACCATGGGAAATGGGGGCAAAATGTTGATCCTGTATTTGAGGAGCTGCTTTACTGAGG
                      ____________________________________________________________
consensus GTACCATGGGAAATGGGGGCAAAATGTTGATCCTGTATTTGAGGAGCTGCTTTACTGAGG
 
. : . : . : . : . : . :
rJMSF034L03+ CTAAACAAGAAAGAAGCTGTGTTTTGGGGTTTTGTTTTTGTGGTGTAATCATTCTTCAAA
rJMFF003M01+ CTAAACAAGAAAGAAGCTGTGTTTTGGGGTTTTGTTTTTGTGGTGTAATCATTCTTCAAA
rJMFF021L17+ CTAAACAAGAAAGAAGCTGTGTTTTGGGGTTTTGTTTTTGTGGTGTAATCATTCTTCAAA
rJMFF004P16+ CTAAACAAGAAAGAAGCTGTGTTTTGGGGTTTTGTTTTTGTGGTGTAATCATTCTTCAAA
rJMFF041I07+ CTAAACAAGAAAGAAGCTGTGTTTTGGGGTTTTGTTTTTGTGGGGTAATCATTCTTCAAA
                      ____________________________________________________________
consensus CTAAACAAGAAAGAAGCTGTGTTTTGGGGTTTTGTTTTTGTGGTGTAATCATTCTTCAAA
 
. : . : . : . : . : . :
rJMSF034L03+ ACACTTTAGGGCAACTTGTGTTTAGAATAAAGGTTTGCATACAGAGATGTATTTTGGTCC
rJMFF003M01+ ACACTTTAGGGCAACTTGTGTTTAGAATAAAGGTTTGCATACAGAGATGTATTTTGGTCC
rJMFF021L17+ ACACTTTAGGGCAACTTGTGTTTAGAATAAAGGTTTGCATACAGAGATGTATTTTGGTCC
rJMFF004P16+ ACACTTTAGGGCAACTTGTGTTTAGAATAAAGGTTTGCATACAGAGATGTATTTTGGTCC
rJMFF041I07+ ACACTTTAGGGCAACTTGTGTTTAGAATAAAGGTTTGCATACAGAGATGTATTTTGGTCC
                      ____________________________________________________________
consensus ACACTTTAGGGCAACTTGTGTTTAGAATAAAGGTTTGCATACAGAGATGTATTTTGGTCC
 
. : . : . : . : . : . :
rJMSF034L03+ AATCTTTGTTGGATATTTATATAGTAGATGGGTGCTTCAGGTTTCAAGCATGCAACCCAA
rJMFF003M01+ AATCTTTGTTGGATATTTATATAGTAGATGGGTGCTTCAGGTTTCAAGCATGCAACCCAA
rJMFF021L17+ AATCTTTGTTGGATATTTATATAGTAGATGGGTGCTTCAGGTTTCAAGCATGCAACCCAA
rJMFF004P16+ AATCTTTGTTGGATATTTATATAGTAGATGGGTGCTTCAGGTTTCAAGCATGCAACCCAA
rJMFF041I07+ AATCTTTGTTGGATATTTATATAGTAGATGGGTGCTTCAGGTTTCAAGCATGCAACCCAA
                      ____________________________________________________________
consensus AATCTTTGTTGGATATTTATATAGTAGATGGGTGCTTCAGGTTTCAAGCATGCAACCCAA
 
. : . : . : . : . : . :
rJMSF034L03+ AACTTTAATTCATAC
rJMFF003M01+ AACTTTAATTCATACTTTGGGTGTTAAAATATCATTTTAAGTTTCGTAGGAATATATTAA
rJMFF021L17+ AACTTTAATTCATACTTTGGGTGTTAAAATATCATTTTAAGTTTCGTAGGAATATATTAA
rJMFF004P16+ AACTTTAATTCATACTTTGGGTGTTAAAATATCATTTTAAGTTTCGTAGGAATATATTAA
rJMFF041I07+ AACTTTAATTCATACTTTGGGTGTTAAAATATCATTTTAAGTTTCGTAGGAATATATTAA
                      ____________________________________________________________
consensus AACTTTAATTCATACTTTGGGTGTTAAAATATCATTTTAAGTTTCGTAGGAATATATTAA
 
. : . : . : . : . : . :
rJMFF003M01+ AATTGTTGATCAGACGAGCATGGCGA
rJMFF021L17+ AATTGTTGATCAGACGAGCATGGCGACGTCGTATTT
rJMFF004P16+ AATTGTTGATCAGACGAGCATGGCGACGTCGTATTT
rJMFF041I07+ AATTGTTGATCAGACGAGCATGGCGACGTCGTATTTTAGTACGAGAATCATATTCTATCT
                      ____________________________________________________________
consensus AATTGTTGATCAGACGAGCATGGCGACGTCGTATTTTAGTACGAGAATCATATTCTATCT