Contig 005488:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022E15Sequence489006450 (5)758005488 (5)emb|CBI27739.3|3e-85unnamed protein product [Vitis vinifera]
JMFF041B04Sequence637006450 (5)619005488 (5)ref|XP_006474551.1|169PREDICTED: uncharacterized protein LOC102608026 [Citrus sinensis]
JMSF014I02Sequence477006450 (5)747005488 (5)emb|CBI27739.3|2e-63unnamed protein product [Vitis vinifera]
JMSF019E12Sequence532006450 (5)771005488 (5)emb|CBI27739.3|2e-95unnamed protein product [Vitis vinifera]
JMSF019G03Sequence234006450 (5)672005488 (5)emb|CBI27739.3|8e-75unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019E12+                                CTCCAGGGATGAAGCTGATATTCGTGTTCATGAATTCT
                      ____________________________________________________________
consensus                                   CTCCAGGGATGAAGCTGATATTCGTGTTCATGAATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019E12+          TCAAGACATGTTATTTCAAAAAAGGGATACATCCAATTCCAGGTGCTAAGCAAGCTCTGC
                      ____________________________________________________________
consensus             TCAAGACATGTTATTTCAAAAAAGGGATACATCCAATTCCAGGTGCTAAGCAAGCTCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+                                               GTCCCGACAAAATGCAATTAAAG
rJMSF019E12+          AAAACTTATCCAGATTCTGCAACCTTTCAATAGTTACGTCCCGACAAAATGCAATTAAAG
rJMSF019G03+                                               GTCCCGACAAAATGCAATTAAAG
                      ____________________________________________________________
consensus             AAAACTTATCCAGATTCTGCAACCTTTCAATAGTTACGTCCCGACAAAATGCAATTAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
rJMSF019E12+          ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
rJMSF019G03+          ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
rJMFF041B04+                                                  TTTTCAAAATATTCACTTTG
                      ____________________________________________________________
consensus             ATCACACAGTTAAGTGGATTGAGAACCATTATCCTGGTCTTTTTCAAAATATTCACTTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
rJMSF019E12+          GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
rJMSF019G03+          GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
rJMFF022E15+                                                                     G
rJMFF041B04+          GAAATCATTNTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
                      ____________________________________________________________
consensus             GAAATCATTTTGCTTTAAATGGAAAGTCCATACCAAAATCAGAAATTTGCAGGTCACTCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMSF019E12+          GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMSF019G03+          GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMFF022E15+          GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
rJMFF041B04+          GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
                      ____________________________________________________________
consensus             GAGCAAAAGTTTTGATCGATGATAATCCAAGATATGCCATCGAGTGTGCTGAAGTTGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMSF019E12+          TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMSF019G03+          TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMFF022E15+          TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
rJMFF041B04+          TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
                      ____________________________________________________________
consensus             TGAAAGTTCTTCTGTTTGATTACGAAAATTCTTATCCATGGTGCAAGACAGAGTCAGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMSF019E12+          AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMSF019G03+          AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMFF022E15+          AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
rJMFF041B04+          AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
                      ____________________________________________________________
consensus             AAGGACACCCCCTAGTCACTAAAGTTCATAATTGGGAAGAAGTGGAGCAGCAATTAGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMSF019E12+          CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMSF019G03+          CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMFF022E15+          CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
rJMFF041B04+          CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
                      ____________________________________________________________
consensus             CGTGGACTTTTCCCAAAATCATTGCAAAGTAGGTTCGGTAGATAATTTGATGATTCAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMSF019E12+          GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMSF019G03+          GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMFF022E15+          GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
rJMFF041B04+          GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
                      ____________________________________________________________
consensus             GAGTTCTTACTCTTGTATTATCCTCGGTCCTGGCTCTAGGTGGAATGCTGGTGGGAGACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMSF019E12+          ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMSF019G03+          A-TCAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMFF022E15+          ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
rJMFF041B04+          ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
                      ____________________________________________________________
consensus             ATTGAATCAAATCTGTGATAATAGACTTGAGTTGATTCCCTTTCCCTTCCAGGGCCAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMSF019E12+          CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMSF019G03+          CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMFF022E15+          CTCCTCCTTTCACTTTCATTA-TTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
rJMFF041B04+          CTCCTCCTTTCACTTTCATTA-TTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
                      ____________________________________________________________
consensus             CTCCTCCTTTCACTTTCATTATTTTTAAGAAATGGGGCAAGGTTTAGGCTCCTGAAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF014I02+          TTACTTCAAG                                                  
rJMSF019E12+          TTACTTCAAG                                                  
rJMSF019G03+          TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAAC   
rJMFF022E15+          TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAACATG
rJMFF041B04+          TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAACATG
                      ____________________________________________________________
consensus             TTACTTCAAGTAGATTGTATGACAAAGGTGGACAATAGAATCAAGCTTGTATAAAACATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF022E15+          GAATTTATTTGATAACTAAAATGATCATAATAAAAGC                       
rJMFF041B04+          GAATTTATTTGATAACTAAAATGATCATAATAAAAGCATTCGGGTTCCATCTTTCCCATT
                      ____________________________________________________________
consensus             GAATTTATTTGATAACTAAAATGATCATAATAAAAGCATTCGGGTTCCATCTTTCCCATT