Contig 005487:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001B08Sequence455005487 (10)ref|XP_009590601.1|3e-85PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis]584001745 (12)ref|XP_011077317.1|1e-76PREDICTED: S-adenosylmethionine synthase 3 [Sesamum indicum]
JMFF020L20Sequence528005487 (10)ref|XP_009803543.1|1e-104PREDICTED: pollen-specific protein SF3-like [Nicotiana sylvestris]701005487 (10)ref|XP_009590601.1|9e-84PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis]
JMFF022A19Sequence357005487 (10)ref|XP_009803543.1|2e-60PREDICTED: pollen-specific protein SF3-like [Nicotiana sylvestris]703005487 (10)ref|XP_009590601.1|7e-84PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis]
JMFF040K05Sequence554005487 (10)ref|XP_009803543.1|3e-114PREDICTED: pollen-specific protein SF3-like [Nicotiana sylvestris]832005487 (10)ref|XP_009590601.1|3e-118PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis]
JMFF044O20Sequence643005487 (10)ref|XP_009590601.1|5e-117PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis]630009828 (23)ref|XP_004253517.1|4e-68PREDICTED: protein CER1-like 1, partial [Solanum lycopersicum]
JMFN006L04Sequence638005487 (10)ref|XP_009803543.1|6e-38PREDICTED: pollen-specific protein SF3-like [Nicotiana sylvestris]
JMFN009I23Sequence642005487 (10)ref|XP_009590601.1|8e-62PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN006L04+ TTATAAAAATATCACATAAAAATTTTCTGGCACACATAAGGGCAAAAGCAGCAAT
rJMFF020L20- CATAGAAATTTTCTGGCACACACTAGGGCAAAAGCAGCAAT
rJMFF022A19- CATAGAAATTTTCTGGCACACACTAGGGCAAAAGCAGCAAT
                      ____________________________________________________________
consensus TTATAAAAATATCACATAGAAATTTTCTGGCACACACTAGGGCAAAAGCAGCAAT
 
. : . : . : . : . : . :
JMFN006L04+ GCCCATATGAAATGATTTAAAG-AAAAGACTCAAAAAAGCACTGTCAAGGATTGATTCAA
rJMFF020L20- GCCCATATGAAATGATTTAAAG-AAAAGACTCAAAAAAACATTGTCAAGGATTGATTCAG
rJMFF022A19- GCCCATATGAAATGATTTAAAGAAAAAGACTCAAAAAAACATTGTCAAGGATTGATTCAG
rJMFF040K05- ATGAAATGATTTAAAG-AAAAGACTCAAAAAAACATTGTCAAGGATTGATTCAG
                      ____________________________________________________________
consensus GCCCATATGAAATGATTTAAAG-AAAAGACTCAAAAAAACATTGTCAAGGATTGATTCAG
 
. : . : . : . : . : . :
JMFN006L04+ CAACAAAATGGAATTCTTACAGAAAAACTCTCAAGTGTTACCACTTGAAAATGCATTGAG
rJMFF020L20- CAACAAAATGGAATTCTTACAGAAAAACTCTCAAGTGTTACCACTTGAAAATGCATTGAG
rJMFF022A19- CAACAAAATGGAATTCTTACAGAAAAACTCTCAAGTGTTACCACTTGAAAATGCATTGAG
rJMFF040K05- CAACAAAATGGAATTCTTACAGAAAAACTCTCAAGTGTTACCACTTGAAAATGCATTGAG
                      ____________________________________________________________
consensus CAACAAAATGGAATTCTTACAGAAAAACTCTCAAGTGTTACCACTTGAAAATGCATTGAG
 
. : . : . : . : . : . :
JMFN006L04+ GAATGCTGACATGTATGTTTAGACTTCATCATGGAAAACAGATCTCAAACCATGATATCC
rJMFF020L20- GAATGCTGACATGTATGTTTAGACTTCATCATGG-AAACTGATCTCAAACCATGATATCG
rJMFF022A19- GAATGCTGACATGTATGTTTAGACTTCATCATGG-AAACTGATCTCAAACCATGATATCG
rJMFF040K05- GAATGCTGACATGTATGTTTAGACTTCATCATGG-AAACTGATCTCAAACCATGATATCG
                      ____________________________________________________________
consensus GAATGCTGACATGTATGTTTAGACTTCATCATGG-AAACTGATCTCAAACCATGATATCG
 
. : . : . : . : . : . :
JMFN006L04+ GAACGAACATATATAAACATTTAAGCATTAAACGATCAGATCAGGCCGTGCCATTCTCAG
rJMFF020L20- GAACGGACATATATAAACATTTAAGCATTAAACGATCAGATCAGGCCGTGCCATTCACAG
rJMFF022A19- GAACGGACATATATAAACATTTAAGCATTAAACGATCAGATCAGGCCGTGCCATTCACAG
JMFF044O20+ ATTAAACGATCAGATCAGGCCGTGCCATTCACAG
JMFN009I23+ TTCTCAG
rJMFF040K05- GAACGGACATATATAAACATTTAAGCATTAAACGATCAGATCAGGCCGTGCCATTCACAG
                      ____________________________________________________________
consensus GAACGGACATATATAAACATTTAAGCATTAAACGATCAGATCAGGCCGTGCCATTCACAG
 
. : . : . : . : . : . :
JMFN006L04+ TCACCGGCACCTCCTTAGATTT----CTCGAATACAACTGGCTGAAGTTCCCCTTTTCCT
rJMFF020L20- TCACCGGCACCTCCTTAGATTTCTCGCTCGTATCCAACTGGCTGAAGTTCCCCTTTTCCT
rJMFF022A19- TCACCGGCACCTCCTTAGATTTCTCGCTCGTATCCAACTGGCTGAAGTTCCCCTTTTCCT
JMFF040K05+ AGTTCCCCTTTTCCT
JMFF044O20+ TCACCGGCACCTCCTTAGATTTCTCGCTCGTATCCAACTGGCTGAAGTTCCCCTTTTCCT
JMFN009I23+ TCACTGGCACCTTCTTAGATTTCTCGCTCGTATCCAACTGGCTGAAGTTCCCCTTTTCCT
rJMFF040K05- TCACCGGCACCTCCTTAGATTTCTCGCTCGTATCCAACTGGCTGAAGTTCCCCTTTTCCT
                      ____________________________________________________________
consensus TCACCGGCACCTCCTTAGATTTCTCGCTCGTATCCAACTGGCTGAAGTTCCCCTTTTCCT
 
. : . : . : . : . : . :
JMFN006L04+ TGAACAACTAAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
rJMFF020L20- TGAACAACTGAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
rJMFF022A19- TGAACAACTGAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
JMFF040K05+ TGAACAACTGAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
JMFF044O20+ TGAACAACTGAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATNTG
JMFN009I23+ TGAACAGCTGAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
JMFF020L20+ GCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
rJMFF040K05- TGAACAACTGAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
                      ____________________________________________________________
consensus TGAACAACTGAGTGTGGTGGTGCCTGCAATACAGCTTATGCTCGTGTGCTACATAATTTG
 
. : . : . : . : . : . :
JMFN006L04+ ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAACAAGCCCTGTGGTACGATGTTC
rJMFF020L20- ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
rJMFF022A19- ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
JMFF040K05+ ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
JMFF044O20+ ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
JMFN009I23+ ATGGACTGATCACACAGCCGCCATGAGTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
JMFF020L20+ ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
JMFF022A19+ ACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
JMFF001B08+ GAAGCAAGCCCTGTGGTACGATGTTC
rJMFF040K05- ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
                      ____________________________________________________________
consensus ATGGACTGATCACACAGCCGCCGTGACTGCACTTGAAGCAAGCCCTGTGGTACGATGTTC
 
. : . : . : . : . : . :
JMFN006L04+ CATCAACCG----CTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAAC-AATTTATCTT
rJMFF020L20- CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
rJMFF022A19- CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
JMFF040K05+ CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
JMFF044O20+ CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
JMFN009I23+ CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
JMFF020L20+ CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
JMFF022A19+ CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
JMFF001B08+ CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
rJMFF040K05- CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
                      ____________________________________________________________
consensus CATCAACCGCTACCTTTTCAATGGGGTAAACTGTTTTCTTGCAAGCAACGCATTTATCTT
 
. : . : . : . : . : . :
JMFN006L04+ GAGTACCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
rJMFF020L20- GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
rJMFF022A19- GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
JMFF040K05+ GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
JMFF044O20+ GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
JMFN009I23+ GAGTTCCTGCAAACAGGCTTGAAACTTTGCTGCT--TGTGTCCCTGATCTGCAGCTCTTT
JMFF020L20+ GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
JMFF022A19+ GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
JMFF001B08+ GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
rJMFF040K05- GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
                      ____________________________________________________________
consensus GAGTTCCCGCAAACAGGCTTGAAACTTTGCTGCTTGTGTGTCCCTGATCTGCAGCTCTTT
 
. : . : . : . : . : . :
JMFN006L04+ CCCTCACCGTTTTTGGAGCCCCTTCAGAACTCTAGTCCAAGCTACCAGTCATT
rJMFF020L20- CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
rJMFF022A19- CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
JMFF040K05+ CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
JMFF044O20+ CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
JMFN009I23+ CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCACTTTGAAAA
JMFF020L20+ CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
JMFF022A19+ CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
JMFF001B08+ CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
rJMFF040K05- CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
                      ____________________________________________________________
consensus CCCTCACCGTTTTTGGAGCCCCTTCAAAACTCTTATCCAAGCTACCAGTCATTTTGAAAA
 
. : . : . : . : . : . :
rJMFF020L20- GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGA
rJMFF022A19- GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGA
JMFF040K05+ GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGAGCT
JMFF044O20+ GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGAGCT
JMFN009I23+ GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAGGAGTTGTAATTGCTGAGCT
JMFF020L20+ GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGAGCT
JMFF022A19+ GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGAGC
JMFF001B08+ GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGAGCT
rJMFF040K05- GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGAGCT
                      ____________________________________________________________
consensus GTTGATCAAAGTGTGGTTTGCAATATAAAACTCCTTCGAAAGAGTTGTAATTGCTGAGCT
 
. : . : . : . : . : . :
JMFF040K05+ TGAGAGTGCCCTTGCAATGGAAGCATCTGAAGCATGCCTTGTGGTAGACCTTATTGTCTG
rJMFF040K05- TGAGAGTGCCCTTGCAATGGAAGCATCTGAAGCATGCCTTGTGGTAGACCTTATTGTCTG
                      ____________________________________________________________
consensus TGAGAGTGCCCTTGCAATGGAAGCATCTGAAGCATGCCTTGTGGTAGACCTTATTGTCTG
 
. : . : . : . : . : . :
JMFF040K05+ CTCTGAGCTGATCCACCAAGTATACTGTCTTTTCACAAGCTTTACATTTCTGGGTTGTCC
rJMFF040K05- CTCTGAGCTGATCCACCAAGTATACTGTCTTTTCACAAGCTTTACATTTCTGGGTTGTCC
                      ____________________________________________________________
consensus CTCTGAGCTGATCCACCAAGTATACTGTCTTTTCACAAGCTTTACATTTCTGGGTTGTCC
 
. : . : . : . : . : . :
JMFF040K05+ CTGCAAACGTTGCCATCTCTCCTCTCAATCTCTCTCTCTCTCTCTCTCCTATCTTTTCT
rJMFF040K05- CTGCAAACGTTGCCATCTCTCCTCTCAATCTCTCTCTCTCTCTCTCTCCTATCTTTTCTC
                      ____________________________________________________________
consensus CTGCAAACGTTGCCATCTCTCCTCTCAATCTCTCTCTCTCTCTCTCTCCTATCTTTTCTC