Contig 005480:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N05Sequence556004447 (4)ref|XP_009613479.1|4e-50PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]711005480 (2)ref|XP_006357406.1|7e-58PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMFF038B24Sequence457004447 (4)ref|XP_006342924.1|5e-59PREDICTED: subtilisin-like protease-like [Solanum tuberosum]743005480 (2)ref|XP_010322825.1|9e-53PREDICTED: subtilisin-like protease [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF038B24+                                               GGAGCCCAATCCACTCAGTTTCA
                      ____________________________________________________________
consensus                                                  GGAGCCCAATCCACTCAGTTTCA
 
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rJMFF002N05+            ATGGATCTGGCCACGTTGATCCAAACAGGGCCCTGGATCCGGGTTTGGTCTACGATTT
rJMFF038B24+          TTATGGATCTGGCCACGTTGATCCAAACAGGGCCCTGGGTCCGGGTTTGGTCTACGATTT
                      ____________________________________________________________
consensus             TTATGGATCTGGCCACGTTGATCCAAACAGGGCCCTGGGTCCGGGTTTGGTCTACGATTT
 
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rJMFF002N05+          AGGAGTTAGTGATTACGTGGATTTCCTATGCACCATTGGATATGACTCTCAGACAATTTG
rJMFF038B24+          AGGAGTTAGTGATTACGTGGATTTCCTATGCACCATTGGATATGACTCTCAGACAATTTG
                      ____________________________________________________________
consensus             AGGAGTTAGTGATTACGTGGATTTCCTATGCACCATTGGATATGACTCTCAGACAATTTG
 
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rJMFF002N05+          GGTGGTCACGGGGGATTACGTGGATTGCAGGACACGAAGTTTGGGGAACCCCGGCTCTCT
rJMFF038B24+          GGTGGTCACGGGGGATTACGTGGATTGCAGGACACGAAGTTTGGGGAACCCCGGCTCTCT
                      ____________________________________________________________
consensus             GGTGGTCACGGGGGATTACGTGGATTGCAGGACACGAAGTTTGGGGAACCCCGGCTCTCT
 
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rJMFF002N05+          AAATTACCCTTCCTTTTCAGTTACTTTCGACAGATTCAACACCGTAACCTACAAGAGAAC
rJMFF038B24+          AAATTACCCTTCCTTTTCAGTTACTTTCGACAGATTCAACACCGTAACCTACAAGAGAAC
                      ____________________________________________________________
consensus             AAATTACCCTTCCTTTTCAGTTACTTTCGACAGATTCAACACCGTAACCTACAAGAGAAC
 
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rJMFF002N05+          AGTAAAAAATGTGGGGACCAATAAAAACGCGGTTTATGAGGTAAAAGTGAATATGTTTTC
rJMFF038B24+          AGTAAAAAATGTGGGGACCAATAAAAACGCGGTTTATGAGGTAAAAGTGAATATGTTTTC
                      ____________________________________________________________
consensus             AGTAAAAAATGTGGGGACCAATAAAAACGCGGTTTATGAGGTAAAAGTGAATATGTTTTC
 
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rJMFF002N05+          GGGTGTTGCAGTGAGCGTGTCACCGACCAGACTGGTGTTCAATGAGAATAATGATACGCT
rJMFF038B24+          GGGTGTTGCAGTGAGCGTGTCACCGACCAGACTGGTGTTCAATGAGAATAATGATACGCT
                      ____________________________________________________________
consensus             GGGTGTTGCAGTGAGCGTGTCACCGACCAGACTGGTGTTCAATGAGAATAATGATACGCT
 
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rJMFF002N05+          ATCTTATGAGGTAACTTTTACATTGCTGGTACAACCTGGCTTTGCGGCATATGGGTCGAT
rJMFF038B24+          ATCTTATGAGGTAACTTTTACATTGCTGGTACAACCTGGCTTTGCGGCATATGGGTCGAT
                      ____________________________________________________________
consensus             ATCTTATGAGGTAACTTTTACATTGCTGGTACAACCTGGCTTTGCGGCATATGGGTCGAT
 
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rJMFF002N05+          AGTCTGGGAGGACGGGGTGCATGTTGTTAGTAGCCCAATAACGGTTAATGTGCAACCTCG
rJMFF038B24+          AGTCTGGGAGGACGGGGTGCATGTTGTTAGTAGCCCAATAACGGTTAATGTGCAACCTCG
                      ____________________________________________________________
consensus             AGTCTGGGAGGACGGGGTGCATGTTGTTAGTAGCCCAATAACGGTTAATGTGCAACCTCG
 
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rJMFF002N05+          TTTGCTATCTAGCTAAATGCTAATTAAATGTCTGCATAATTTGCTTTTATGTACCTTGTG
rJMFF038B24+          TTTGCTATCTAGCTAAATGCTAATTAAATGTCTGCATAATTTGCTTTTATGTACCTTGTG
                      ____________________________________________________________
consensus             TTTGCTATCTAGCTAAATGCTAATTAAATGTCTGCATAATTTGCTTTTATGTACCTTGTG
 
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rJMFF002N05+          TAATGGAATAAATCCACATAATATATATTATTATGGTGGATAAATCTACGTAAGTGTGGT
rJMFF038B24+          TAATGGAATAAATCCACATAATATATATTATTATGGTGGATAAATCTACGTAAGTGTGGT
                      ____________________________________________________________
consensus             TAATGGAATAAATCCACATAATATATATTATTATGGTGGATAAATCTACGTAAGTGTGGT
 
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rJMFF002N05+          GTAGAAATGTACCTTGTTCGTTCTTATGTATCCTATGTAATAAAAAATAATAAT      
rJMFF038B24+          GTAGAAATGTACCTTGTTCGTTCTTATGTATCCTATGTAATAAAAAATAATAATCCACAT
                      ____________________________________________________________
consensus             GTAGAAATGTACCTTGTTCGTTCTTATGTATCCTATGTAATAAAAAATAATAATCCACAT
 
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rJMFF038B24+          ATAGATTATTATGATGGATAAATCTACATATAAGTGTGTAAAAAAAATGGGTCTAGTTTA
                      ____________________________________________________________
consensus             ATAGATTATTATGATGGATAAATCTACATATAAGTGTGTAAAAAAAATGGGTCTAGTTTA