Contig 005474:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037G24Sequence592000488 (4)ref|XP_011086275.1|2e-76PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2-like 719005474 (2)ref|XP_002530426.1|3e-44SEC14 cytosolic factor, putative [Ricinus communis] gb|EEF31957.1| SEC14 cytosol
JMFN011I19Sequence613005474 (2)ref|XP_006352314.1|4e-29PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1-like

Alignment

This contig is upended


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JMFN011I19+                                       TAGAATAGAACCTGAGATAGCCACACATCTGC
rJMFF037G24-           CTTTATAAATTTGATAGTGTAATACAATAGAATAGAACCTGAGATAGCCACACATCTGC
                      ____________________________________________________________
consensus              CTTTATAAATTTGATAGTGTAATACAATAGAATAGAACCTGAGATAGCCACACATCTGC
 
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JMFN011I19+           TTTACATTATTCGCCAATATCTTCCATGTCTAAACATCAATATAACTCGATCCCTATGTA
rJMFF037G24-          TTTACATTATTCGCCAATATCTTCCATGTCTAAACATCAATATAACTCGATCCCTATGTA
                      ____________________________________________________________
consensus             TTTACATTATTCGCCAATATCTTCCATGTCTAAACATCAATATAACTCGATCCCTATGTA
 
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JMFN011I19+           CACCTCACAGTACACCCAAACAAACTTATAGTTTCAAATTCGAGGATGCAACTTGCATGT
rJMFF037G24-          CACCTCACAGTACACCCAAACAAACTTATAGTTTCAAATTCGAGGATGCAACTTGCATGT
                      ____________________________________________________________
consensus             CACCTCACAGTACACCCAAACAAACTTATAGTTTCAAATTCGAGGATGCAACTTGCATGT
 
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JMFN011I19+           TAGCTTACACATATAATATATATATATATAAGTCTATGTTGTAGGGAAAAAAAGATCTAG
rJMFF037G24-          TAGCTTACACATATAATATATATATATATAAGTCTATGTTGTAGGGAAAAAAAGATCTAG
                      ____________________________________________________________
consensus             TAGCTTACACATATAATATATATATATATAAGTCTATGTTGTAGGGAAAAAAAGATCTAG
 
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JMFN011I19+           TATAAGCTACTTCTCTACACGAAAGAAAGACGTTGGTTAGAAGGTAGAGCATCCAAGTCG
rJMFF037G24-          TATAAGCTACTTCTCTACACGAAAGAAAGACGTTGGTTAGAAGGTAGAGCATCCAAGTCG
                      ____________________________________________________________
consensus             TATAAGCTACTTCTCTACACGAAAGAAAGACGTTGGTTAGAAGGTAGAGCATCCAAGTCG
 
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JMFN011I19+           ATAACGGACAACTACAGACATCACCAGAGCCCAATCGAGCAGCAAAAGAAACAATAACAG
rJMFF037G24-          ATAACGGACAACTACAGACATCACCAGAGCCCAATCGAGCAGCAAAAGAAACAATAACAG
                      ____________________________________________________________
consensus             ATAACGGACAACTACAGACATCACCAGAGCCCAATCGAGCAGCAAAAGAAACAATAACAG
 
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JMFN011I19+           AGAACTCAACTCTTTATCAATGGCGATTGTTAATTTTCAGGTCTTCCATTGACTCGGCAA
rJMFF037G24-          AGAACTCAACTCTTTATCAATGGCGATTGTTAATTTTCAGGTCTTCCATTGACTCGGCAA
                      ____________________________________________________________
consensus             AGAACTCAACTCTTTATCAATGGCGATTGTTAATTTTCAGGTCTTCCATTGACTCGGCAA
 
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JMFN011I19+           GCCCATCTTGGTTTCCAAGTTTTTGTAACTCGGATGCCATTGTCTTGACGAGCTCTGTTC
rJMFF037G24-          GCCCATCTTGGTTTCCAAGTTTTTGTAACTCGGATGCCATTGTCTTGACGAGCTCTGTTC
                      ____________________________________________________________
consensus             GCCCATCTTGGTTTCCAAGTTTTTGTAACTCGGATGCCATTGTCTTGACGAGCTCTGTTC
 
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JMFN011I19+           CTTCTGTGTCAGTCTCGGGGAAATCCACATGAACAGAGCCCTGTTTTAGTGGACCCCGAG
rJMFF037G24-          CTTCTGTGTCAGTCTCGGGGAAATCCACATGAACAGAGCCCTGTTTTAGTGGACCCCGAG
                      ____________________________________________________________
consensus             CTTCTGTGTCAGTCTCGGGGAAATCCACATGAACAGAGCCCTGTTTTAGTGGACCCCGAG
 
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JMFN011I19+           GCTCGCGAATTAACGACTGCTGCTTCATGTAATTGTAATGTTGGTGGTGAAAGGGATGGT
rJMFF037G24-          GCTCGCGAATTAACGACTGCTGCTTCATGTAATTGTAATGTTGGTGGTGAAAGGGATGGT
                      ____________________________________________________________
consensus             GCTCGCGAATTAACGACTGCTGCTTCATGTAATTGTAATGTTGGTGGTGAAAGGGATGGT
 
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JMFN011I19+           CCAAGGAGAAGCAATTTTCAAATGACCCTTCGGAATATCGG                   
rJMFF037G24-          CCAAGGAGAAGCAATTTTCAAATGACCCTTCGGAATATCGGGAAGAACCCGAACCTTGCC
                      ____________________________________________________________
consensus             CCAAGGAGAAGCAATTTTCAAATGACCCTTCGGAATATCGGGAAGAACCCGAACCTTGCC
 
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rJMFF037G24-          TACGACAAAAGTGGGGGAGAGACGAGTAGTCCATTATCTTCAACAGATCATCTTGTCCAC
                      ____________________________________________________________
consensus             TACGACAAAAGTGGGGGAGAGACGAGTAGTCCATTATCTTCAACAGATCATCTTGTCCAC