Contig 005471:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF012B18+                             ATCATAGTCATGATGGGGAGGAAGGTTACCCGGGAGATCTT
                      ____________________________________________________________
consensus                                ATCATAGTCATGATGGGGAGGAAGGTTACCCGGGAGATCTT
 
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rJMSF012B18+          TCCATTACTGCAACATACAGTCTTACTGCTAAGACAACACTGAGGCTTGACATGGAAGCT
                      ____________________________________________________________
consensus             TCCATTACTGCAACATACAGTCTTACTGCTAAGACAACACTGAGGCTTGACATGGAAGCT
 
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rJMSF012B18+          GTTCTTGGAAACAAGGCAACTCCAGTCAGTTTGGCTCAACATACTTATTGGAACCTCGCG
                      ____________________________________________________________
consensus             GTTCTTGGAAACAAGGCAACTCCAGTCAGTTTGGCTCAACATACTTATTGGAACCTCGCG
 
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rJMSF012B18+          GGCCACAATTCAGGGGACATTCTCGAACACACTGCTCAGTTGTGGGCTAATCACTATACC
                      ____________________________________________________________
consensus             GGCCACAATTCAGGGGACATTCTCGAACACACTGCTCAGTTGTGGGCTAATCACTATACC
 
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rJMSF012B18+          CCGGTGGATCAGAACACTATTCCTACCGGAGAAATAAAGGCGGTTAAAGACACTCCTCCG
rJMFF036G24+                                     GGAGAAATAAAGGCGGTTAAAGACACTCCTCCG
                      ____________________________________________________________
consensus             CCGGTGGATCAGAACACTATTCCTACCGGAGAAATAAAGGCGGTTAAAGACACTCCTCCG
 
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rJMSF012B18+          TTTGATTTCACCACCGAAAAGAAGATTGGCCGAGATATCCAGCAGGTTGGTTTAGGGTAC
rJMFF036G24+          TTTGATTTCACCACCGAAAAGAAGATTGGCCGAGATATCCAGCAGGTTGGTTTAGGGTAC
                      ____________________________________________________________
consensus             TTTGATTTCACCACCGAAAAGAAGATTGGCCGAGATATCCAGCAGGTTGGTTTAGGGTAC
 
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rJMSF012B18+          GACCACAACTACGTACTCGACTGTGGAGTCGAGAAGTCCGGGTTGAAGCATGCGGTGAAG
rJMFF036G24+          GACCACAACTACGTACTCGACTGTGGAGTCGAGAAGTCCGGGTTGAAGCATGCGGTGAAG
                      ____________________________________________________________
consensus             GACCACAACTACGTACTCGACTGTGGAGTCGAGAAGTCCGGGTTGAAGCATGCGGTGAAG
 
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rJMSF012B18+          ATCAAGGATCCCAAGAGCTGCAGGGTTCTTAACTTATGGACGAACGCCCCTGGGATGCAA
rJMFF036G24+          ATCAAGGATCCCAAGAGCTGCAGGGTTCTTAACTTATGGACGAACGCCCCTGGGATGCAA
                      ____________________________________________________________
consensus             ATCAAGGATCCCAAGAGCTGCAGGGTTCTTAACTTATGGACGAACGCCCCTGGGATGCAA
 
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rJMSF012B18+          TTCTACACCGCGAACTATGTGAATGGGGTCGTTGGAAAAGGTGGGGCCGTCTACAATAAG
rJMFF036G24+          TTCTACACCGCGAACTATGTGAATGGGGTCGTTGGAAAAGGTGGGGCCGTCTACAATAAG
                      ____________________________________________________________
consensus             TTCTACACCGCGAACTATGTGAATGGGGTCGTTGGAAAAGGTGGGGCCGTCTACAATAAG
 
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rJMSF012B18+          CATGCCGGGGTTTGTTTAGAGACTCAGGGCTTCCCGAATGCTGTCAACACACCGAATTTC
rJMFF036G24+          CATGCCGGGGTTTGTTTAGAGACTCAGGGCTTCCCGAATGCTGTCAACACACCGAATTTC
                      ____________________________________________________________
consensus             CATGCCGGGGTTTGTTTAGAGACTCAGGGCTTCCCGAATGCTGTCAACACACCGAATTTC
 
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rJMSF012B18+          CCGTCCGTTATTGTCCAGCCTGGTGAAAAGTATCAACACACCATGGTGTATGAGTTCTCA
rJMFF036G24+          CCGTCCGTTATTGTCCAGCCTGGTGAAAAGTATCAACACACCATGGTGTATGAGTTCTCA
                      ____________________________________________________________
consensus             CCGTCCGTTATTGTCCAGCCTGGTGAAAAGTATCAACACACCATGGTGTATGAGTTCTCA
 
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rJMSF012B18+          GTTGAGTAAAAGATGGTAAATTCTGCAATAAAGTTACTGCCTTTATGCACATTTTGCTTC
rJMFF036G24+          GTTGAGTAAAAGATGGTAAATTCTGCAATAAAGTTACTGCCTTTATGCACATTTTGCTTC
                      ____________________________________________________________
consensus             GTTGAGTAAAAGATGGTAAATTCTGCAATAAAGTTACTGCCTTTATGCACATTTTGCTTC
 
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rJMSF012B18+          AACCTCACTTTTGGTAATCAGACATCT                                 
rJMFF036G24+          AACCTCACTTTTGGTAATCAGACATCTTTACAGTCTAAATAATTAATGATTACTTCATTT
                      ____________________________________________________________
consensus             AACCTCACTTTTGGTAATCAGACATCTTTACAGTCTAAATAATTAATGATTACTTCATTT
 
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rJMFF036G24+          TGCTGTTTATGTTACATGTTATAGTCCTATACATCTAAAGTTGAGGCCATTATTTCATTA
                      ____________________________________________________________
consensus             TGCTGTTTATGTTACATGTTATAGTCCTATACATCTAAAGTTGAGGCCATTATTTCATTA
 
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rJMFF036G24+          TAAAGCTATAGGGAAGGGATTAGACTTGTTCGATTGGGTACCACATTACAATTAATCTCG
                      ____________________________________________________________
consensus             TAAAGCTATAGGGAAGGGATTAGACTTGTTCGATTGGGTACCACATTACAATTAATCTCG
 
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rJMFF036G24+          TCTTAATTTACATATTTGATGTTGGTATAATGGTATACTTTTGTGGAGTAAATTTATTAA
                      ____________________________________________________________
consensus             TCTTAATTTACATATTTGATGTTGGTATAATGGTATACTTTTGTGGAGTAAATTTATTAA