Contig 005465:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034M11Sequence491002292 (5)gb|AAV88066.1|3e-07NBS-LRR protein [Ipomoea batatas]734005465 (4)
JMSF021P15Sequence685002292 (5)720005465 (4)
JMSF022K13Sequence671002292 (5)gb|AAV88066.1|6e-07NBS-LRR protein [Ipomoea batatas]741005465 (4)ref|XP_011091063.1|5e-06PREDICTED: putative late blight resistance protein homolog R1B-16 [Sesamum indi
JMSF028O10Sequence625002292 (5)gb|AAV88066.1|4e-06NBS-LRR protein [Ipomoea batatas]615005465 (4)ref|XP_006366838.1|1e-20PREDICTED: putative late blight resistance protein homolog R1B-16-like [Solanum

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF028O10+ GTNAGCTGTAAAAATCTTATGAAGTTGAGCTNTAGGTGTGTGAGCTTTGAGGTG
                      ____________________________________________________________
consensus GTNAGCTGTAAAAATCTTATGAAGTTGAGCTNTAGGTGTGTGAGCTTTGAGGTG
 
. : . : . : . : . : . :
rJMSF028O10+ AAGACAATTAATAGTTTTAGCAAGTTGCCTAAACTTGAGGTGCTAGTGCTAAGCAAGTGT
                      ____________________________________________________________
consensus AAGACAATTAATAGTTTTAGCAAGTTGCCTAAACTTGAGGTGCTAGTGCTAAGCAAGTGT
 
. : . : . : . : . : . :
rJMSF028O10+ GACTGGATCGGTGGAGCGTGGGAACTACTTGAAAAGGAGAGTTTTGACCAGTTAATTTAT
                      ____________________________________________________________
consensus GACTGGATCGGTGGAGCGTGGGAACTACTTGAAAAGGAGAGTTTTGACCAGTTAATTTAT
 
. : . : . : . : . : . :
rJMSF028O10+ TTGGAAATTAATACGAGTAATTTTCTTGAGCGTTGGGAAGCAAGTGCTTCAAATTTTCCG
                      ____________________________________________________________
consensus TTGGAAATTAATACGAGTAATTTTCTTGAGCGTTGGGAAGCAAGTGCTTCAAATTTTCCG
 
. : . : . : . : . : . :
rJMSF028O10+ AAACTTGAGCGTCTAGTCCTTGATTGGTGCGAAGTATTGGAAAAGATCCCAGTTGGGTTT
rJMSF022K13+ AAAGATTCCAGTTGAGTTT
                      ____________________________________________________________
consensus AAACTTGAGCGTCTAGTCCTTGATTGGTGCGAAGTATTGGAAAAGATTCCAGTTGGGTTT
 
. : . : . : . : . : . :
rJMSF028O10+ GCAGAAATTCCAAATTTGAAGTCAATCAAAGTGTATGAATGTCTTCAGTCTGTAGTGGAT
rJMSF022K13+ GCAGAAATTCCAAATTTGAAGTCAATTGAATTGGATTACTGTCTTCCTTCTGCGGTGGAT
                      ____________________________________________________________
consensus GCAGAAATTCCAAATTTGAAGTCAATTGAATTGTATTACTGTCTTCCTTCTGTGGTGGAT
 
. : . : . : . : . : . :
rJMSF028O10+ TCTGCCAAGGAAATTCAAAGAGAGCAACATGAGCAAGGAAATGATAATATGGTTGTCATT
rJMSF022K13+ TCTGCCAAGAAAATTCAAAAAGAGCAACATGAGCAAGGAAATGAAAATATGGTTGTCATT
                      ____________________________________________________________
consensus TCTGCCAAGGAAATTCAAAGAGAGCAACATGAGCAAGGAAATGATAATATGGTTGTCATT
 
. : . : . : . : . : . :
rJMSF028O10+ GA
rJMSF022K13+ GAGGAACACACACTACAGTGATTCATGGCAGCCTAGCTCTCGCAATGATAAACATATTAG
                      ____________________________________________________________
consensus GAGGAACACACACTACAGTGATTCATGGCAGCCTAGCTCTCGCAATGATAAACATATTAG
 
. : . : . : . : . : . :
rJMSF021P15+ AAAGCAAGGTGACATACAGCTCCCACAGTACACTCTTAGCTC
rJMSF022K13+ AGTTGATCCATATTTCAAAAAGCAAGGTGACATACAGCTCCCACAGTACACTCTTAGCTC
rJMFF034M11+ AAAGCAAGGTGACATACAGCTCCCACAGTACACTCTTAGCTC
                      ____________________________________________________________
consensus AGTTGATCCATATTTCAAAAAGCAAGGTGACATACAGCTCCCACAGTACACTCTTAGCTC
 
. : . : . : . : . : . :
rJMSF021P15+ CAATTCAATGGCTCCGATATCTTGGACACCGCCACCCTAGCTTGTAAAATCCAACGCTTT
rJMSF022K13+ CAATTCAATGGCTCCGATATCTTGGACACCGCCACCCTAGCTTGTAAAATCCAACGCTTT
rJMFF034M11+ CAATTCAATGGCTCCGATATCTTGGACACCGCCACCCTAGCTTGTAAAATCCAACGCTTT
                      ____________________________________________________________
consensus CAATTCAATGGCTCCGATATCTTGGACACCGCCACCCTAGCTTGTAAAATCCAACGCTTT
 
. : . : . : . : . : . :
rJMSF021P15+ TCATCGTTAATGATTCGGCTGGTTTCGACCAGGTAGTAAGTTCTCCTTCATAAATCTGGG
rJMSF022K13+ TCATCGTTAATGATTCGGCTGGTTTCGACCAGGTAGTAAGTTCTCCTTCATAAATCTGGG
rJMFF034M11+ TCATCGTTAATGATTCGGCTGGTTTCGACCAGGTAGTAAGTTCTCCTTCATAAATCTGGG
                      ____________________________________________________________
consensus TCATCGTTAATGATTCGGCTGGTTTCGACCAGGTAGTAAGTTCTCCTTCATAAATCTGGG
 
. : . : . : . : . : . :
rJMSF021P15+ CACTTTAATTTGTTGTAGCTTGTTATGGGAAGTTTGCTTAGAACTGTGATCCGGGTTTAG
rJMSF022K13+ CACTTTAATTTGTTGTAGCTTGTTATGGGAAGTTTGCTTAGAACTGTGATCCGGGTTTAG
rJMFF034M11+ CACTTTAATTTGTTGTAGCTTGTTATGGGAAGTTTGCTTAGAACTGTGATCCGGGTTTAG
                      ____________________________________________________________
consensus CACTTTAATTTGTTGTAGCTTGTTATGGGAAGTTTGCTTAGAACTGTGATCCGGGTTTAG
 
. : . : . : . : . : . :
rJMSF021P15+ CCAAAACTATATATTGCTTGTTGCGAGGCTTTATCATGGCTTAAATGGAGATGTATTAAT
rJMSF022K13+ CCAAAACTATATATTGCTTGTTGCGAGGCTTTATCATGGCTTAAATGGAGATGTATTAAT
rJMFF034M11+ CCAAAACTATATATTGCTTGTTGCGAGGCTTTATCATGGCTTAAATGGAGATGTATTAAT
                      ____________________________________________________________
consensus CCAAAACTATATATTGCTTGTTGCGAGGCTTTATCATGGCTTAAATGGAGATGTATTAAT
 
. : . : . : . : . : . :
rJMSF021P15+ AACGTCATCCTAGAGTTGAGACAGACAATTTTAAATTTTGTTAATGTTTCTCATGATTAT
rJMSF022K13+ AACGTCATCCTAGAGTTGAGACAGACAATTTTAAATTTTGTTAATGTTTCTCATGATTAT
rJMFF034M11+ AACGTCATCCTAGAGTTGAGACAGACAATTTTAAATTTTGTTAATGTTTCTCATGATTAT
                      ____________________________________________________________
consensus AACGTCATCCTAGAGTTGAGACAGACAATTTTAAATTTTGTTAATGTTTCTCATGATTAT
 
. : . : . : . : . : . :
rJMSF021P15+ TCAACTTTAGTTATTGACCACTTTAGATTCTACTATTGGGGATGTTTTAGTTCGTCATGT
rJMSF022K13+ TCAACTTTAGTTATTGACCACTTTAGATTCTACTATTGGGGATGTTTTAGTTCGTCATGT
rJMFF034M11+ TCAACTTTAGTTATTGACCACTTTAGATTCTACTATTGGGGATGTTTTAGTTCGTCATGT
                      ____________________________________________________________
consensus TCAACTTTAGTTATTGACCACTTTAGATTCTACTATTGGGGATGTTTTAGTTCGTCATGT
 
. : . : . : . : . : . :
rJMSF021P15+ TGGTAAATCATCAAATCATTCTGCTCATGCTTTGACACGGGTTTTAGGTTCTCAAGCTAG
rJMSF022K13+ TGGTAAATCATCAAATCATTCTGCTCATGCTTTGACACGGGTTTTAGGTTCTCAAGCTAG
rJMFF034M11+ TGGTAAATCATCAAATCATTCTGCTCATGCTTTGACACGGGTTTTAGGTTCTCAAGCTAG
                      ____________________________________________________________
consensus TGGTAAATCATCAAATCATTCTGCTCATGCTTTGACACGGGTTTTAGGTTCTCAAGCTAG
 
. : . : . : . : . : . :
rJMSF021P15+ TTCGAGGGTGTGGTATTTTAATTCGTAGCCTCTTATTGC
rJMSF022K13+ TTCGAGGGTGTGGTATTTTAATTCGTAGCCTCTTATTGC
rJMFF034M11+ TTCGAGGGTGTGGTATTTTAATTCGTAGCCTCTTATTGCATGTATTCCTGTGTTAAATTC
                      ____________________________________________________________
consensus TTCGAGGGTGTGGTATTTTAATTCGTAGCCTCTTATTGCATGTATTCCTGTGTTAAATTC