| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034D24 | Sequence | 509 | 005464 (6) | gb|KCW51380.1| | 1e-44 | hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis] | 576 | 005464 (6) | gb|KCW51380.1| | 2e-44 | hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis] |
| JMFN017H17 | Sequence | 450 | 005464 (6) | ref|XP_004502239.1| | 2e-29 | PREDICTED: ubiquitin-like protein 5-like [Cicer arietinum] ref|XP_006594516.1| P | |||||
| JMFN018F03 | Sequence | 482 | 005464 (6) | gb|KCW51380.1| | 1e-44 | hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis] | |||||
| JMFN034M24 | Sequence | 498 | 005464 (6) | gb|KCW51380.1| | 3e-44 | hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis] | |||||
| JMFS065B05 | Sequence | 459 | 005464 (6) | gb|KCW51380.1| | 1e-44 | hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN034M24+ CACCAAAGACCTTTAAAAATTTACAATTCTACGAATCCAGAACTGT
rJMFF034D24- CCTTTAAAAATTTACAATTCTACGAATCCAGAACTGT
____________________________________________________________
consensus CACCAAAGACCTTTAAAAATTTACAATTCTACGAATCCAGAACTGT
. : . : . : . : . : . :
JMFN034M24+ CAAAATTCCAAACAACCAACATTAGAGATCACCAAACAACAGAATTCCACATTATTTCAT
JMFN018F03+ GATCACCAAACAACAGAATTCCACATTATTTCAT
JMFF034D24+ ATTAGAGATCACCAAACAACAGAATTCCACATTATTTCAT
JMFS065B05+ GATCACCAAACAACAGAATTCCACATTATTTCAT
JMFN017H17+ GATCACCAAACAACAGAATTCCACATTATTTCAT
rJMFF034D24- CAAAATTCCAAACAACCAACATTAGAGATCACCAAACAACAGAATTCCACATTATTTCAT
____________________________________________________________
consensus CAAAATTCCAAACAACCAACATTAGAGATCACCAAACAACAGAATTCCACATTATTTCAT
. : . : . : . : . : . :
JMFN034M24+ GAAATTCAACGAGTAGGAAATATAACTAGAGATCCGAGGGATCAAACCAACCGCAAACAT
JMFN018F03+ GAAATTCAACGAGTAGGAAATATAACTAGAGATCCGAGGGATCAAACCAACCGCAAACAT
JMFF034D24+ GAAATTCAACGAGTAGGAAATATAACTAGAGATCCGAGGGATCAAACCAACCGCAAACAT
JMFS065B05+ GAAATTCAACGAGTAGGAAATATAACTAGAGATCCGAGGGATCAAACCAACCGCAAACAT
JMFN017H17+ GAAATTCAACGAGTAGGAAATATAACTAGAGATCCGAGGGATCAAACCAACCGCAAACAT
rJMFF034D24- GAAATTCAACGAGTAGGAAATATAACTAGAGATCCGAGGGATCAAACCAACCGCAAACAT
____________________________________________________________
consensus GAAATTCAACGAGTAGGAAATATAACTAGAGATCCGAGGGATCAAACCAACCGCAAACAT
. : . : . : . : . : . :
JMFN034M24+ TAAAGACATCGTCTTCATCATAAACTACGATAGACAAGGGTTCAATTACACGGTAACAGA
JMFN018F03+ TAAAGACATCGTCTTCATCATAAACTACGATAGACAAGGGTTCAATTACACGGTAACAGA
JMFF034D24+ TAAAGACATCGTCTTCATCATAAACTACGATAGACAAGGGTTCAATTACACGGTAACAGA
JMFS065B05+ TAAAGACATCGTCTTCATCATAAACTACGATAGACAAGGGTTCAATTACACGGTAACAGA
JMFN017H17+ TAAAGACATCGTCTTCATCATAAACTACGATAGACAAGGGTTCAATTACACGGTAACAGA
rJMFF034D24- TAAAGACATCGTCTTCATCATAAACTACGATAGACAAGGGTTCAATTACACGGTAACAGA
____________________________________________________________
consensus TAAAGACATCGTCTTCATCATAAACTACGATAGACAAGGGTTCAATTACACGGTAACAGA
. : . : . : . : . : . :
JMFN034M24+ CGATAGTAAAGAGACTTAATTGTAGTAGAGCTCAAGGCCCATGCCGTCATGGATTTCGTA
JMFN018F03+ CGATAGTAAAGAGACTTAATTGTAGTAGAGCTCAAGGCCCATGCCGTCATGGATTTCGTA
JMFF034D24+ CGATAGTAAAGAGACTTAATTGTAGTAGAGCTCAAGGCCCATGCCGTCATGGATTTCGTA
JMFS065B05+ CGATAGTAAAGAGACTTAATTGTAGTAGAGCTCAAGGCCCATGCCGTCATGGATTTCGTA
JMFN017H17+ CGATAGTAAAGAGACTTAATTGTAGTAGAGCTCAAGGCCCATGCCGTCATGGATTTCGTA
rJMFF034D24- CGATAGTAAAGAGACTTAATTGTAGTAGAGCTCAAGGCCCATGCCGTCATGGATTTCGTA
____________________________________________________________
consensus CGATAGTAAAGAGACTTAATTGTAGTAGAGCTCAAGGCCCATGCCGTCATGGATTTCGTA
. : . : . : . : . : . :
JMFN034M24+ GTCCTTGAGGGTGATATGGTCCTTGTAGATGGTGTACCACTTCTGAATTCGGATCTTATC
JMFN018F03+ GTCCTTGAGGGTGATATGGTCCTTGTAGATGGTGTACCACTTCTGAATTCGGATCTTATC
JMFF034D24+ GTCCTTGAGGGTGATATGGTCCTTGTAGATGGTGTACCACTTCTGAATTCGGATCTTATC
JMFS065B05+ GTCCTTGAGGGTGATATGGTCCTTGTAGATGGTGTACCACTTCTGAATTCGGATCTTATC
JMFN017H17+ GTCCTTGAGGGTGATATGGTCCTTGTAGATGGTGTACCACTTCTGAATTCGGATCTTATC
rJMFF034D24- GTCCTTGAGGGTGATATGGTCCTTGTAGATGGTGTACCACTTCTGAATTCGGATCTTATC
____________________________________________________________
consensus GTCCTTGAGGGTGATATGGTCCTTGTAGATGGTGTACCACTTCTGAATTCGGATCTTATC
. : . : . : . : . : . :
JMFN034M24+ GGCCCGGGTTCCGGTCTGCGCCGCCACCAGCTTCTTCAGGTCTCCGATGGTGTCGTCATC
JMFN018F03+ GGCCCGGGTTCCGGTCTGCGCCGCCACCAGCTTCTTCAGGTCTCCGATGGTGTCGTCATC
JMFF034D24+ GGCCCGGGTTCCGGTCTGCGCCGCCACCAGCTTCTTCAGGTCTCCGATGGTGTCGTCATC
JMFS065B05+ GGCCCGGGTTCCGGTCTGCGCCGCCACCAGCTTCTTCAGGTCTCCGATGGTGTCGTCATC
JMFN017H17+ GGCCCGGGTTCCGGTCTGCGCCGCCACCAGCTTCTTCAGGTCTCCGATGGTGTCGTCATC
rJMFF034D24- GGCCCGGGTTCCGGTCTGCGCCGCCACCAGCTTCTTCAGGTCTCCGATGGTGTCGTCATC
____________________________________________________________
consensus GGCCCGGGTTCCGGTCTGCGCCGCCACCAGCTTCTTCAGGTCTCCGATGGTGTCGTCATC
. : . : . : . : . : . :
JMFN034M24+ GTTGC-ACTTCACCCTCACCTTCTTCCCTAGACGGTCGTTCAGCACCACCTCGATCATCT
JMFN018F03+ GTTGC-ACTTCACCCTCACCTTCTTCCCTAGACGGTCGTTCAGCACCACCTCGATCATCT
JMFF034D24+ GTTGC-ACTTCACCCTCACCTTCTTCCCTAGACGGTCGTTCAGCACCACCTCGATCATCT
JMFS065B05+ GTTGC-ACTTCACCCTCACCTTCTTCCCTAGACGGTCGTTCAGCACCACCTCGATCATCT
JMFN017H17+ GTTGCTACTTCACCCTCACCTTCTTCCCTAGACGGTCGTTCAGCACCACCTCGATCATCT
rJMFF034D24- GTTGC-ACTTCACCCTCACCTTCTTCCCTAGACGGTCGTTCAGCACCACCTCGATCATCT
____________________________________________________________
consensus GTTGC-ACTTCACCCTCACCTTCTTCCCTAGACGGTCGTTCAGCACCACCTCGATCATCT
. : . : . : . : . : . :
JMFN034M24+ TCGCACTTCGCGTGTTCCCTCCCCTCGAAATCG
JMFN018F03+ TCGCACTTCGCGTGTTCCCTCCCCTCGAAATCGTAGCTCCGGCGTCGTCTCCGAATTGAT
JMFF034D24+ TCGCACTTCGCGTGTTCCCTCCCCTCGAAATCGTAGCTCCGGCGTCGTCTCCGAATTGAT
JMFS065B05+ TCGCACTTCGCGTGTTCCCTCCCCTCGAAATCGTAGCTCCGG
JMFN017H17+ TCGCACTTCGCGTGTTCCCTCCCCTCGAAATCGTA
rJMFF034D24- TCGCACTTCGCGTGTTCCCTCCCCTCGAAATCGTAGCTCCGGCGTCGTCTCCGAATTGAT
____________________________________________________________
consensus TCGCACTTCGCGTGTTCCCTCCCCTCGAAATCGTAGCTCCGGCGTCGTCTCCGAATTGAT
. : . : . : . : . : . :
JMFN018F03+ TGGAACGGGGCAAAGACACGGTATATATA
JMFF034D24+ TGGAACGGGGCAAAGACACGGTATATATAGAGATAACCAATACTCCAATC
rJMFF034D24- TGGAACGGGGCAAAGACACGGTATATATAGAGATAACCAATACTCCAATCACAGCGATGA
____________________________________________________________
consensus TGGAACGGGGCAAAGACACGGTATATATAGAGATAACCAATACTCCAATCACAGCGATGA