| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031E11 | Sequence | 562 | 005458 (6) | gb|EYU38406.1| | 2e-93 | hypothetical protein MIMGU_mgv1a014641mg [Erythranthe guttata] | 431 | 005458 (6) | emb|CDP20926.1| | 4e-28 | unnamed protein product [Coffea canephora] |
| JMSF019P10 | Sequence | 321 | 005458 (6) | gb|EYU38406.1| | 4e-36 | hypothetical protein MIMGU_mgv1a014641mg [Erythranthe guttata] | 718 | 005458 (6) | emb|CDP20926.1| | 3e-109 | unnamed protein product [Coffea canephora] |
| JMSF020E10 | Sequence | 673 | 005458 (6) | emb|CDP20926.1| | 2e-117 | unnamed protein product [Coffea canephora] | 728 | 005458 (6) | emb|CDP20926.1| | 9e-112 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF019P10- GACCAGAAATATCAATTTTATAAACTCGGGAGTTGAATCCGAGA
JMFF031E11- AGAAATATCAATTTTATAAACTCGGGAGTTGAATCCGAGA
JMSF020E10- AGAAATATCAATTTTATAAACTCGGGAGTTGAATCCGAGA
____________________________________________________________
consensus GACCAGAAATATCAATTTTATAAACTCGGGAGTTGAATCCGAGA
. : . : . : . : . : . :
JMSF019P10- AGAGACGCAGAAGAGAAGATCACACAGCTGAGGGGAGGTACTGAAAATCCCTGCATTTGA
JMFF031E11- AGAGACGCAGAAGAGAAGATCACACAGCTGAGGGGAGGTACTGAAAATCCCTGCATTTGA
JMSF020E10- AGAGACGCAGAAGAGAAGATCACACAGCTGAGGGGAGGTACTGAAAATCCCTGCATTTGA
____________________________________________________________
consensus AGAGACGCAGAAGAGAAGATCACACAGCTGAGGGGAGGTACTGAAAATCCCTGCATTTGA
. : . : . : . : . : . :
JMSF019P10- ATTATCCAAAAAATGGATCTGAATCCTCCTGCAGGGGAGAACTATGCAAACCCTAATATA
JMFF031E11- ATTATCCAAAAAATGGATCTGAATCCTCCTGCAGGGGAGAACTATGCAAACCCTAATATA
JMSF020E10- ATTATCCAAAAAATGGATCTGAATCCTCCTGCAGGGGAGAACTATGCAAACCCTAATATA
rJMSF019P10+ GAACTATGCAAACCCTAATATA
rJMSF020E10+ TGCAGGGGAGAACTATGCAAACCCTAATATA
____________________________________________________________
consensus ATTATCCAAAAAATGGATCTGAATCCTCCTGCAGGGGAGAACTATGCAAACCCTAATATA
. : . : . : . : . : . :
JMSF019P10- TGTTTCTTCCATGTGCTCTTCAAGGCAGCAGCTTTGGCATTTTACATACTTTCAGCTCTA
JMFF031E11- TGTTTCTTCCATGTGCTCTTCAAGGCAGCAGCTTTGGCATTTTACATACTTTCAGCTCTA
JMSF020E10- TGTTTCTTCCATGTGCTCTTCAAGGCAGCAGCTTTGGCATTTTACATACTTTCAGCTCTA
rJMSF019P10+ TGTTTCTTCCATGTGCTCTTCAAGGCAGCAGCTTTGGCATTTTACATACTTTCAGCTCTA
rJMSF020E10+ TGTTTCTTCCATGTGCTCTTCAAGGCAGCAGCTTTGGCATTTTACATACTTTCAGCTCTA
____________________________________________________________
consensus TGTTTCTTCCATGTGCTCTTCAAGGCAGCAGCTTTGGCATTTTACATACTTTCAGCTCTA
. : . : . : . : . : . :
JMSF019P10- TTTGTCGATAGTTTTGTTATCATATTTGTGGTCACTGTTCTGCTAGCAGCTCTTGACTTT
JMFF031E11- TTTGTCGATAGTTTTGTTATCATATTTGTGGTCACTGTTCTGCTAGCAGCTCTTGACTTT
JMSF020E10- TTTGTCGATAGTTTTGTTATCATATTCGTGGTCACTGTTCTGCTAGCAGCTCTTGACTTT
rJMSF019P10+ TTTGTCGATAGTTTTGTTATCATATTTGTGGTCACTGTTCTGCTAGCAGCTCTTGACTTT
rJMSF020E10+ TTTGTCGATAGTTTTGTTATCATATTCGTGGTCACTGTTCTGCTAGCAGCTCTTGACTTT
____________________________________________________________
consensus TTTGTCGATAGTTTTGTTATCATATTTGTGGTCACTGTTCTGCTAGCAGCTCTTGACTTT
. : . : . : . : . : . :
JMSF019P10- TGGGTTGTTAAGAATGTGAGTGGACGCATCTTAGTGG
JMFF031E11- TGGGTTGTTAAGAATGTGAGTGGACGCATCTTAGTGGGTTTGAGGTGGTGGAATGAAATA
JMSF020E10- TGGGTTGTTAAGAATGTGAGTGGACGCATCTTAGTGGGTTTGAGGTGGTGGAATGAAATA
rJMSF019P10+ TGGGTTGTTAAGAATGTGAGTGGACGCATCTTAGTGGGTTTGAGGTGGTGGAATGAAATA
rJMSF020E10+ TGGGTTGTTAAGAATGTGAGTGGACGCATCTTAGTGGGTTTGAGGTGGTGGAATGAAATA
____________________________________________________________
consensus TGGGTTGTTAAGAATGTGAGTGGACGCATCTTAGTGGGTTTGAGGTGGTGGAATGAAATA
. : . : . : . : . : . :
JMFF031E11- AGTGAAGAGGGTGAAAGTTTGTGGAAATTTGAGTGCCTTGACCAAGAGTCGTTGGCTCGC
JMSF020E10- AGTGAAGAGGGTGAAAGTTTGTGGAAATTTGAGTGCCTTGACCAAGAGTCGTTGGCTCGC
rJMSF019P10+ AGTGAAGAGGGTGAAAGTTTGTGGAAATTTGAGTGCCTTGACCAAGAGTCGTTGGCTCGC
rJMSF020E10+ AGTGAAGAGGGTGAAAGTTTGTGGAAATTTGAGTGCCTTGACCAAGAGTCGTTGGCTCGC
____________________________________________________________
consensus AGTGAAGAGGGTGAAAGTTTGTGGAAATTTGAGTGCCTTGACCAAGAGTCGTTGGCTCGC
. : . : . : . : . : . :
JMFF031E11- ATGAATAAGAAGGATTCTTGGCTTTTCTGGTGGACACTATACCTTACTGCTGTGGCTTGG
JMSF020E10- ATGAATAAGAAGGATTCTTGGCTTTTCTGGTGGACACTATACCTTACTGCTGTGGCTTGG
rJMSF019P10+ ATGAATAAGAAGGATTCTTGGCTTTTCTGGTGGACACTATACCTTACTGCTGTGGCTTGG
rJMSF020E10+ ATGAATAAGAAGGATTCTTGGCTTTTCTGGTGGACACTATACCTTACTGCTGTGGCTTGG
rJMFF031E11+ GTGGCTCGG
____________________________________________________________
consensus ATGAATAAGAAGGATTCTTGGCTTTTCTGGTGGACACTATACCTTACTGCTGTGGCTTGG
. : . : . : . : . : . :
JMFF031E11- ATTATTCTCGGAATATTCTCACTCATTANATTCCAAGCTGACTATCTCCTTGTTATTGGT
JMSF020E10- ATTATTCTCGGAATATTCTCACTCATTAGATTCCAAGCTGACTATCTCCTTGTTATTGGT
rJMSF019P10+ ATTATTCTCGGAATATTCTCACTCATTAGATTCCAAGCTGACTATCTCCTTGTTATTGGT
rJMSF020E10+ ATTATTCTCGGAATATTCTCACTCATTAGATTCCAAGCTGACTATCTCCTTGTTATTGGT
rJMFF031E11+ ATTATTCTCGGAATATTCTCACTCATTAGATTCCAAGNTGANTATCTCCTTGTTATTGGT
____________________________________________________________
consensus ATTATTCTCGGAATATTCTCACTCATTAGATTCCAAGCTGACTATCTCCTTGTTATTGGT
. : . : . : . : . : . :
JMFF031E11- GTGTGCTTGACACTCAGCATTGCAAATATTGTTGGCTTTACT
JMSF020E10- GTGTGCTTGACACTCAGCATTGCAAATATTGTTGGCTTTACTAGGTGCCGCAAAGATGCC
rJMSF019P10+ GTGTGCTTGACACTCAGCATTGCAAATATTGTTGGCTTTACTAGGTGCCGCAAAGATGCC
rJMSF020E10+ GTGTGCTTGACACTCAGCATTGCAAATATTGTTGGCTTTACTAGGTGCCGCAAAGATGCC
rJMFF031E11+ GTGTGCTTGNCACTCAGCATTGCAAATATTGTTGGCTTTACTAGGTGCCGCAAAGATGCC
____________________________________________________________
consensus GTGTGCTTGACACTCAGCATTGCAAATATTGTTGGCTTTACTAGGTGCCGCAAAGATGCC
. : . : . : . : . : . :
JMSF020E10- AAGAAGCAGCTTCAAGCATTTGCCACTCAGACCCTCGCATCACGAGTATCTTCTACCATC
rJMSF019P10+ AAGAAGCAGCTTCAAGCATTTGCCACTCAGACCCTCGCATCACGAGTATCTTCTACCATC
rJMSF020E10+ AAGAAGCAGCTTCAAGCATTTGCCACTCAGACCCTCGCATCACGAGTATCTTCTACCATC
rJMFF031E11+ AAGAAGCAGCTTCAAGCATTTGCCACTCAGACCCTCGCATCANGAGTATCTTNTACCATC
____________________________________________________________
consensus AAGAAGCAGCTTCAAGCATTTGCCACTCAGACCCTCGCATCACGAGTATCTTCTACCATC
. : . : . : . : . : . :
JMSF020E10- CAGACTGCATTCAGTGTTGTTTGAACTC
rJMSF019P10+ CAGACTGCATTCAGTGTTGTTTGAACTCCTACAAGGAAGAGGTGAACTGGGCACAAAAGA
rJMSF020E10+ CAGACTGCATTCAGTGTTGTTTGAACTCCTACAAGGAAGAGGTGAACTGGGCACAAAAGA
rJMFF031E11+ CAGATTGCANTCAGTGTTGTTTGAACTCNTACAAGGAAGAGGNGAACTGGGCACAAAAGA
____________________________________________________________
consensus CAGACTGCATTCAGTGTTGTTTGAACTCCTACAAGGAAGAGGTGAACTGGGCACAAAAGA
. : . : . : . : . : . :
rJMSF019P10+ ATCAATTCGTGAATGTCAGCCAACTTACACACTTGCATGTCACTGTATTGGAATGTCAAC
rJMSF020E10+ ATCAATTCGTGAATGTCAGCCAACTTACACACTTGCATGTCACTGTATTGGAATGTCAAC
rJMFF031E11+ ATCAATTCGTGAATGTCAGCCAACTTACACACTTGCATGTCACTGTATTGGAATGTCAAC
____________________________________________________________
consensus ATCAATTCGTGAATGTCAGCCAACTTACACACTTGCATGTCACTGTATTGGAATGTCAAC
. : . : . : . : . : . :
rJMSF019P10+ AGCTTTTTCTTTTACAGTTTTGTAGAGATGATGGAACAATGGATAGGCGTTTGTATTATT
rJMSF020E10+ AGCTTTTTCTTTTACAGTTTTGTAGAGATGATGGAACAATGGATAGGCGTTTGTATTATT
rJMFF031E11+ AGCTTTTTCTTTTACAGTTTTGTAGAGATGATGGAACAATGGATAGGCGTNTGTATTATT
____________________________________________________________
consensus AGCTTTTTCTTTTACAGTTTTGTAGAGATGATGGAACAATGGATAGGCGTTTGTATTATT
. : . : . : . : . : . :
rJMSF019P10+ CTTTGACTACTATAGGTCCAGTGCATGT
rJMSF020E10+ CTTTGACTACTATAGGTCCAGTGCATGT
rJMFF031E11+ CTTNGACTACTATAGGTCCAGTGCATGTNGAACGAACATACAAATAAGTTTGGAAAAAAT
____________________________________________________________
consensus CTTTGACTACTATAGGTCCAGTGCATGTNGAACGAACATACAAATAAGTTTGGAAAAAAT