Contig 005452:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF030C05-                                           ATTGGTCTCCTTCCGTAGGTAGCTCTGT
                      ____________________________________________________________
consensus                                             ATTGGTCTCCTTCCGTAGGTAGCTCTGT
 
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JMFF030C05-           GTAATCAATTCATTCAATCAGATCCACGAACCATATGACTGCATTGGTCGGATCTGATCA
                      ____________________________________________________________
consensus             GTAATCAATTCATTCAATCAGATCCACGAACCATATGACTGCATTGGTCGGATCTGATCA
 
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JMFF030C05-           GATAACTTCTAATCGCTTCTTTCAAATTAGATCCATTAGATCGTTGTTTCTTTAAATTAA
JMSF021F04-              AACTTCTAATCGCTTCTTTCAAATTAGATCCATTAGATCGTTGTTTCTTTAAATTAA
                      ____________________________________________________________
consensus             GATAACTTCTAATCGCTTCTTTCAAATTAGATCCATTAGATCGTTGTTTCTTTAAATTAA
 
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JMFF030C05-           ATATTTGTTAAAATTTTTGGTTGTGAGGATTTGATTATCCACATTGCTGAGGTTTTGCTT
JMSF021F04-           ATATTTGTTAAAATTTTTGGTTGTGAGGATTTGATTATCCACATTGCTGAGGTTTTGCTT
                      ____________________________________________________________
consensus             ATATTTGTTAAAATTTTTGGTTGTGAGGATTTGATTATCCACATTGCTGAGGTTTTGCTT
 
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JMFF030C05-           AATCTATATACTCTGGAAGCCATAAGAAGTCAACTGAAGTAAAAATTGAAGTTCTTAGGA
JMSF021F04-           AATCTATATACTCTGGAAGCCATAAGAAGTCAACTGAAGTAAAAATTGAAGTTCTTAGGA
                      ____________________________________________________________
consensus             AATCTATATACTCTGGAAGCCATAAGAAGTCAACTGAAGTAAAAATTGAAGTTCTTAGGA
 
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JMFF030C05-           ATGGCTTCATTGTCGGCGATTAGTGAGGAGCTCGCGGAAATTGAGGGGCAGATTTCGGAT
JMSF021F04-           ATGGCTTCATTGTCGGCGATTAGTGAGGAGCTCGCGGAAATTGAGGGGCAGATTTCGGAT
                      ____________________________________________________________
consensus             ATGGCTTCATTGTCGGCGATTAGTGAGGAGCTCGCGGAAATTGAGGGGCAGATTTCGGAT
 
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JMFF030C05-           CTCTTTCGAGCACTCTCGAATGGATTTCAGAAATTGGAGAAGGTTAAGGACTCCAACAGG
JMSF021F04-           CTCTTTCGAGCACTCTCGAATGGATTTCAGAAATTGGAGAAGGTTAAGGACTCCAACAGG
                      ____________________________________________________________
consensus             CTCTTTCGAGCACTCTCGAATGGATTTCAGAAATTGGAGAAGGTTAAGGACTCCAACAGG
 
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JMFF030C05-           CAGAGCAGGATGTTGGAGGAGCTTACTGAGAAGATGCGAGAATGTAAGAGGCTGATTAAA
JMSF021F04-           CAGAGCAGGATGTTGGAGGAGCTTACTGAGAAGATGCGAGAATGTAAGAGGCTGATTAAA
                      ____________________________________________________________
consensus             CAGAGCAGGATGTTGGAGGAGCTTACTGAGAAGATGCGAGAATGTAAGAGGCTGATTAAA
 
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JMFF030C05-           GAGTTTGACAGAGAAGTAAAGGATTTGGAGCNTAGAAATGATGCAAATACAAACAAGATT
JMSF021F04-           GAGTTTGACAGAGAAGTAAAGGATTTGGAGCATAGAAATGATGCAAATACAAACAAGATT
                      ____________________________________________________________
consensus             GAGTTTGACAGAGAAGTAAAGGATTTGGAGCATAGAAATGATGCAAATACAAACAAGATT
 
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JMFF030C05-           CTCGCTGGGAAAAAGCAATCGATGATCAAAGAGCTGAACTCATATGTTGCTCTG      
JMSF021F04-           CTCGCTGAGAAAAAGCAATCGATGATCAAAGAGCTGAACTCATATGTTGCTCTGAAAAAG
rJMSF021F04+                                                                     G
                      ____________________________________________________________
consensus             CTCGCTGGGAAAAAGCAATCGATGATCAAAGAGCTGAACTCATATGTTGCTCTGAAAAAG
 
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JMSF021F04-           CAATATGCAGCCAACCGTGACAACAAGAGAGTAGATCTCTTTGAGGGTCCTAGTGAAGGT
rJMSF021F04+          CAATATGCAGCCAACCGTGACAACAAGAGAGTAGATCTCTTTGAGGGTCCTAGTGAAGGT
                      ____________________________________________________________
consensus             CAATATGCAGCCAACCGTGACAACAAGAGAGTAGATCTCTTTGAGGGTCCTAGTGAAGGT
 
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JMSF021F04-           TTTGCTGAGGAGAATGACTTGCTAGCTTCAAATATGACTAATCAACAGCTAATGGATCAT
rJMSF021F04+          TTTGCTGAGGAGAATGACTTGCTAGCTTCAAATATGACTAATCAACAGCTAATGGATCAT
rJMFF030C05+                                                             ATGGATCAT
                      ____________________________________________________________
consensus             TTTGCTGAGGAGAATGACTTGCTAGCTTCAAATATGACTAATCAACAGCTAATGGATCAT
 
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JMSF021F04-           GGGAATAGGATGATGGATGAGACTGATCAAGCCATTGATAGGGCACAAAAGGTGGTGCAT
rJMSF021F04+          GGGAATAGGATGATGGATGAGACTGATCAAGCCATTGATAGGGCACAAAAGGTGGTGCAT
rJMFF030C05+          GGGAATAGGATGATGGATGAGACTGATCAAGCCATTGATAGGGCACAAAAGGTGGTGCAT
                      ____________________________________________________________
consensus             GGGAATAGGATGATGGATGAGACTGATCAAGCCATTGATAGGGCACAAAAGGTGGTGCAT
 
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JMSF021F04-           GAGACTGTAAATGTTGGAACTGAAACTGCAGCAG                          
rJMSF021F04+          GAGACTGTAAATGTTGGAACTGAAACTGCAGCAGCTCTGAAAGCACAGACTGAACAAATG
rJMFF030C05+          GAGACTGTAAATGTTGGAACTGAAACTGCAGCAGCTCTGAAAGCACAGACTGAACAAATG
                      ____________________________________________________________
consensus             GAGACTGTAAATGTTGGAACTGAAACTGCAGCAGCTCTGAAAGCACAGACTGAACAAATG
 
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rJMSF021F04+          AGTAGGATTGTTAATGAGCTGGATTCAATCCACTTCTCTATCAAGAAGGCTTCTCAATTG
rJMFF030C05+          AGTAGGATTGTTAATGAGCTGGATTCAATCCACTTCTCTATCAAGAAGGCTTCTCAATTG
                      ____________________________________________________________
consensus             AGTAGGATTGTTAATGAGCTGGATTCAATCCACTTCTCTATCAAGAAGGCTTCTCAATTG
 
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rJMSF021F04+          GTCAAGGAAATT--------GGTTGCAACTGATCGTTGTATTATGGGATTGCTCTTTCTT
rJMFF030C05+          GTCAAGGAAATTGGTAGGCAGGTTGCAACTGATCGTTGTATTATGGGATTGCTCTTTCTT
                      ____________________________________________________________
consensus             GTCAAGGAAATTGGTAGGCAGGTTGCAACTGATCGTTGTATTATGGGATTGCTCTTTCTT
 
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rJMSF021F04+          ATTGTGATCGGTGTCATCGCAATCATTATTGTGAAGATTGTTAATCCCCATAACAAGGAC
rJMFF030C05+          ATTGTGATCGGTGTCATCGCAATCATTATTGTGAAGATTGTTAATCCCCATAACAAGGAC
                      ____________________________________________________________
consensus             ATTGTGATCGGTGTCATCGCAATCATTATTGTGAAGATTGTTAATCCCCATAACAAGGAC
 
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rJMSF021F04+          ATCCGAGACATCCCAGGATTAGCTCCTCCAGCTCCCAGTCGAAGATTACTTTCACATCCC
rJMFF030C05+          ATCCGAGACATCCCAGGATTAGCTCCTCCAGCTCCCAGTCGAAGATTACTTTCACATCCC
                      ____________________________________________________________
consensus             ATCCGAGACATCCCAGGATTAGCTCCTCCAGCTCCCAGTCGAAGATTACTTTCACATCCC
 
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rJMSF021F04+          AACTGAAAGCTTGCAGGAAAGCATTGAAGGGGCACCGGGCACACTCGATTTCAGGCACAT
rJMFF030C05+          AACTGAAAGCTTGCAGGAAAGCATTGAAGGGGCACCGGGCACACTCGATTTCAGGCACAT
                      ____________________________________________________________
consensus             AACTGAAAGCTTGCAGGAAAGCATTGAAGGGGCACCGGGCACACTCGATTTCAGGCACAT
 
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rJMSF021F04+          AGGCGTCTTATTCAGAGAATGTGTGGTTAGCTTGTGACATTATTGGTGAACCCACAATAG
rJMFF030C05+          AGGCGTCTTATTCAGAGAATGTGTGGTTAGCTTGTGACATTGTTGGTGAACCCACAATAG
                      ____________________________________________________________
consensus             AGGCGTCTTATTCAGAGAATGTGTGGTTAGCTTGTGACATTGTTGGTGAACCCACAATAG
 
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rJMSF021F04+          CTCAAAACCAGGATGCACCCGATCATAGCTTCGACTTTGTTAGACATTCTGATCTGCCAT
rJMFF030C05+          CTCAAAACCAGGATGCACCCGATCATAGCTTCGACTTTGTTAGACATTCTGATCTGCCAT
                      ____________________________________________________________
consensus             CTCAAAACCAGGATGCACCCGATCATAGCTTCGACTTTGTTAGACATTCTGATCTGCCAT
 
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rJMSF021F04+          TTTTCGAGAATGACATCAAACGTTTCAGACATTCTTTTCTATGTTTTGTTGAATAGATTC
rJMFF030C05+          TTTTCGAGAATGACATCAAACGTTTCAGACATTCTTTTCTATGTTTTGTTGAATAGATTC
                      ____________________________________________________________
consensus             TTTTCGAGAATGACATCAAACGTTTCAGACATTCTTTTCTATGTTTTGTTGAATAGATTC
 
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rJMSF021F04+          GATTTGGAGCTGTGTGTATTCTTTTCTACTGTTCTACACATTATATTTAGAAGTT     
rJMFF030C05+          GATTTGGAGCTGTGTGTATTCTTTTCTACTGTTCTACACATTATATTTAGAAGTTTTCCA
                      ____________________________________________________________
consensus             GATTTGGAGCTGTGTGTATTCTTTTCTACTGTTCTACACATTATATTTAGAAGTTTTCCA
 
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rJMFF030C05+          TTCCATCAAGGGAAACCTTAACTTATATAAGACATGAACTGATCTTTGTGTATACCCTAA
                      ____________________________________________________________
consensus             TTCCATCAAGGGAAACCTTAACTTATATAAGACATGAACTGATCTTTGTGTATACCCTAA