Contig 005448:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF029E24+                                                   GGAAAAGATGAGACTTGAG
                      ____________________________________________________________
consensus                                                      GGAAAAGATGAGACTTGAG
 
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rJMFF029E24+          GAAGCTCTCCGTGCAACACAACCAGAGGTTTATGTGAAATTCAAAAAATTGGAAGAGATT
                      ____________________________________________________________
consensus             GAAGCTCTCCGTGCAACACAACCAGAGGTTTATGTGAAATTCAAAAAATTGGAAGAGATT
 
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rJMFF029E24+          GATGAGGAAACAGAGTGCATCATAGCTGAAATCAAAAGAAGGGAGGAAGAAGTTTGTGAA
                      ____________________________________________________________
consensus             GATGAGGAAACAGAGTGCATCATAGCTGAAATCAAAAGAAGGGAGGAAGAAGTTTGTGAA
 
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rJMFF015K08+                 CAGAACTCGAGAAACAGCCCAATTTGGAACCAAGGAAAACTTACATTCAACGG
rJMFF029E24+          CTTTCTGCAGAACTCGAGAAACAGCCCAATTTGGAACCAAGGAAAACTTACATTCAACGG
                      ____________________________________________________________
consensus             CTTTCTGCAGAACTCGAGAAACAGCCCAATTTGGAACCAAGGAAAACTTACATTCAACGG
 
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rJMFF015K08+          ATAATAGAGATCACCAAAAACAGCCGGAAACAGGATGTTGATGTTGATAAAATCCTAAAA
rJMFF029E24+          ATAATAGAGATCACCAAAAACAGCCGGAAACAGGATGTTGATGTTGATAAAATCCTAAAA
                      ____________________________________________________________
consensus             ATAATAGAGATCACCAAAAACAGCCGGAAACAGGATGTTGATGTTGATAAAATCCTAAAA
 
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rJMFF015K08+          GACACACGGGAGCTTCAATTGGAGAGTAATTCTATCCAAGAACGCCTTCATCGAACTTAT
rJMFF029E24+          GACACACGGGAGCTTCAATTGGAGAGTAATTCTATCCAAGAACGCCTTCATCGAACTTAT
                      ____________________________________________________________
consensus             GACACACGGGAGCTTCAATTGGAGAGTAATTCTATCCAAGAACGCCTTCATCGAACTTAT
 
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rJMFF015K08+          GCTGTGGTGGATGAAACAATATTTAGGGAAGCAAAGAAAGACCCGGCAGGGAAGCAAGCT
rJMFF029E24+          GCTGTGGTGGATGAAACAATATTTAGGGAAGCAAAGAAAGACCCGGCAGGGAAGCAAGCT
                      ____________________________________________________________
consensus             GCTGTGGTGGATGAAACAATATTTAGGGAAGCAAAGAAAGACCCGGCAGGGAAGCAAGCT
 
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rJMFF015K08+          TACAGAATCCTCACTAGCATTCATGACAGCTTTGAACAAATAGCTGAAAGACTTCATGAT
rJMFF029E24+          TACAGAATCCTCACTAGCATTCATGACAGCTTTGAACAAATAGCTGAAAGACTTCATGAT
                      ____________________________________________________________
consensus             TACAGAATCCTCACTAGCATTCATGACAGCTTTGAACAAATAGCTGAAAGACTTCATGAT
 
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rJMFF015K08+          ACCGACAGAGCCCGGAGGGAAAGAGCTGACATTGAAGCTAAGCTTGCAAACATGACCTCC
rJMFF029E24+          ACCGACAGAGCCCGGAGGGAAAGAGCTGACATTGAAGCTAAGCTTGCAAACATGACCTCC
                      ____________________________________________________________
consensus             ACCGACAGAGCCCGGAGGGAAAGAGCTGACATTGAAGCTAAGCTTGCAAACATGACCTCC
 
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rJMFF015K08+          AGAAGCTTAGACATTGAAAAGCTCAGAGCAGATCTTGATGCAGTCAAGAACGAAAATGAT
rJMFF029E24+          AGAAGCTTAGACATTGAAAAGCTCAGAGCAGATCTTGATGCAGTCAAGAACGAAAATGAT
                      ____________________________________________________________
consensus             AGAAGCTTAGACATTGAAAAGCTCAGAGCAGATCTTGATGCAGTCAAGAACGAAAATGAT
 
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rJMFF015K08+          CTCCTGGAACGAAAAATCCTAAGCAATTCTTCCAAAAATTCGCCATAGATATTTACCATG
rJMFF029E24+          CTCCTGGAACGAAAAATCCTAAGCAATTCTTCCAAAAATTCGCCATAGATATTTACCATG
                      ____________________________________________________________
consensus             CTCCTGGAACGAAAAATCCTAAGCAATTCTTCCAAAAATTCGCCATAGATATTTACCATG
 
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rJMFF015K08+          CAGTATTGAATACAGTTTCCTATTGATATTTTAGTCGAGCGGGGCAAGTAGTGTTTCTTG
rJMFF029E24+          CAGTATTGAATACAGTTTCCTATTGATATTTTAGTCGAGCGGGGCAAGTAGTGTTTCTTG
                      ____________________________________________________________
consensus             CAGTATTGAATACAGTTTCCTATTGATATTTTAGTCGAGCGGGGCAAGTAGTGTTTCTTG
 
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rJMFF015K08+          ATTTGTAGATCTATATGTACTCTTTAAGGATAATCATAAGTTCATAAC            
rJMFF029E24+          ATTTGTAGATCTATATGTACTCTTTAAGGATAATCATAAGTTCATAACTGTAAAGCTTCA
                      ____________________________________________________________
consensus             ATTTGTAGATCTATATGTACTCTTTAAGGATAATCATAAGTTCATAACTGTAAAGCTTCA