Contig 005446:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028J05Sequence474000922 (17)722005446 (5)ref|XP_010254673.1|7e-52PREDICTED: beta-galactosidase 3-like [Nelumbo nucifera]
JMFF036O01Sequence563000922 (17)emb|CDO97013.1|4e-38unnamed protein product [Coffea canephora]718005446 (5)ref|XP_010254673.1|9e-58PREDICTED: beta-galactosidase 3-like [Nelumbo nucifera]
JMFS154G01Sequence601005446 (5)ref|XP_010254673.1|3e-36PREDICTED: beta-galactosidase 3-like [Nelumbo nucifera]
JMSF036J11Sequence650000922 (17)emb|CDO97013.1|8e-57unnamed protein product [Coffea canephora]785005446 (5)ref|XP_010254673.1|7e-61PREDICTED: beta-galactosidase 3-like [Nelumbo nucifera]
JMSF042I07Sequence750000922 (17)emb|CDO97013.1|2e-56unnamed protein product [Coffea canephora]761005446 (5)ref|XP_010254673.1|5e-62PREDICTED: beta-galactosidase 3-like [Nelumbo nucifera]

Alignment

This contig is upended


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rJMSF036J11+                                                                 TGACN
                      ____________________________________________________________
consensus                                                                    TGACN
 
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rJMFF036O01+                                                ATGGTACAAGGCTTATTTCAAT
rJMSF042I07+                      TTGGTCGCACGACAACAACCTCTGACATGGTACAAGGCTTATTTCAAT
rJMSF036J11+          GATTGAAGGTCCTTGGTCGCACGACAACAACNTCTGACATGGTACAAGGCTTATTTCAAT
rJMFF028J05+                                                                    AT
                      ____________________________________________________________
consensus             GATTGAAGGTCCTTGGTCGCACGACAACAACCTCTGACATGGTACAAGGCTTATTTCAAT
 
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rJMFF036O01+          GAGCCAAGTGGAAACGAGCCCTTGGCATTGGACATGGGTAGTATGGGAAAAGGCCAGGCG
rJMSF042I07+          GAGCCAAGTGGAAACGAGCCCTTGGCATTGGACATGGGTAGTATGGGAAAAGGCCAAGCG
rJMSF036J11+          GAGCCAAGTGGAAACGAGCCCTTGGCATTGGACATGGGTAGTATGGGAAAAGGCCAAGCG
rJMFF028J05+          GAGCCAAGTGGAAACGAGCCCTTGGCATTGGACATGGGTAGTATGGGAAAAGGCCAAGCG
                      ____________________________________________________________
consensus             GAGCCAAGTGGAAACGAGCCCTTGGCATTGGACATGGGTAGTATGGGAAAAGGCCAAGCG
 
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JMFS154G01-                          AGCATTGGTAGATATTGGACAATCCATGCAACCGGAGATTGCAAC
rJMFF036O01+          TGGATCAACGGGCAAAGCATTGGTAGATATTGGACAATCCATGCAACCGGAGATTGCAAC
rJMSF042I07+          TGGATCAACGGGCAAAGCATTGGTAGATATTGGACAATCCATGCAACCGGAGATTGCAAC
rJMSF036J11+          TGGATCAACGGGCAAAGCATTGGTAGATATTGGACAATCCATGCAACCGGAGATTGCAAC
rJMFF028J05+          TGGATCAACGGGCAAAGCATTGGTAGATATTGGACAATCCATGCAACCGGAGATTGCAAC
                      ____________________________________________________________
consensus             TGGATCAACGGGCAAAGCATTGGTAGATATTGGACAATCCATGCAACCGGAGATTGCAAC
 
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JMFS154G01-           ACTTGTACATATGAAGGGACATACAGATCGCCAAAGTGCCAATCTGGTTGCGGACAACCT
rJMFF036O01+          ACTTGTACATATGAAGGGACATACAGATCGCCAAAGTGCCAATCTGGTTGCGGACAACCT
rJMSF042I07+          ACTTGTACATATGAAGGGACATACAGATCGCCAAAGTGCCAATCTGGTTGCGGACAACCT
rJMSF036J11+          ACTTGTACATATGAAGGGACATACAGATCGCCAAAGTGCCAATCTGGTTGCGGACAACCT
rJMFF028J05+          ACTTGTACATATGAAGGGACATACAGATCGCCAAAGTGCCAATCTGGTTGCGGACAACCT
                      ____________________________________________________________
consensus             ACTTGTACATATGAAGGGACATACAGATCGCCAAAGTGCCAATCTGGTTGCGGACAACCT
 
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JMFS154G01-           ACTCAACGATGGTACCACGTTCCTCGATCCTGGCTGAAACCAACAGGAAACCTGCTGGTA
rJMFF036O01+          ACTCAACGATGGTACCACGTTCCTCGATCCTGGCTGAAACCAACAGGAAACCTGCTGGTA
rJMSF042I07+          ACTCAACGATGGTACCACGTTCCTCGATCCTGGCTGAAACCAACAGGAAACCTGCTGGTA
rJMSF036J11+          ACTCAACGATGGTACCACGTTCCTCGATCCTGGCTGAAACCAACAGGAAACCTGCTGGTA
rJMFF028J05+          ACTCAACGATGGTACCACGTTCCTCGATCCTGGCTGAAACCAACAGGAAACCTGCTGGTA
                      ____________________________________________________________
consensus             ACTCAACGATGGTACCACGTTCCTCGATCCTGGCTGAAACCAACAGGAAACCTGCTGGTA
 
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JMFS154G01-           GTCTTTGAGGAGATAGGCGGAGATGCATCGAGAATCTCTGTCGTTAAAAGAACACTCACT
rJMFF036O01+          GTCTTTGAGGAGATAGGCGGAGATGCATCGAGAATCTCTGTCGTTAAAAGAACACTCACT
rJMSF042I07+          GTCTTTGAGGAGATAGGCGGAGATGCATCGAGAATCTCTGTCGTTAAAAGAACACTCACT
rJMSF036J11+          GTCTTTGAGGAGATAGGCGGAGATGCATCGAGAATCTCTGTCGTTAAAAGAACACTCACT
rJMFF028J05+          GTCTTTGAGGAGATAGGCGGAGATGCATCGAGAATCTCTGTCGTTAAAAGAACACTCACT
                      ____________________________________________________________
consensus             GTCTTTGAGGAGATAGGCGGAGATGCATCGAGAATCTCTGTCGTTAAAAGAACACTCACT
 
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JMFS154G01-           TACGTATAGAAAGAAATCATATTAAGATATTACTGTTAGTTTAGTTTTATTTATCTCTAA
rJMFF036O01+          TACGTATAGAAAGAAATCATATTAAGATATTACTGTTAGTTTAGTTTTATTTATCTCTAA
rJMSF042I07+          TACGTATAGAAAGAAATCATATTAAGATATTACTGTTAGTTTAGTTTTATTTATCTCTAA
rJMSF036J11+          TACGTATAGAAAGAAATCATATTAAGATATTACTGTTAGTTTAGTTTTATTTATCTCTAA
rJMFF028J05+          TACGTATAGAAAGAAATCATATTAAGATATTACTGTTAGTTTAGTTTTATTTATCTCTAA
                      ____________________________________________________________
consensus             TACGTATAGAAAGAAATCATATTAAGATATTACTGTTAGTTTAGTTTTATTTATCTCTAA
 
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JMFS154G01-           GAGCCAAAATTTACTGTTTTTACTCCCCTTTCTTTAGATCTTGGATTATGAAAGTTTTAG
rJMFF036O01+          GAGCCAAAATTCACTGTTTTTACTCCCCTTTCTTTAGATCTTGGATTATGAAAGTTTTAG
rJMSF042I07+          GAGCCAAAATTCACTGTTTTTACTCCCCTTTCTTTAGATCTTGGATTATGAAAGTTTTAG
rJMSF036J11+          GAGCCAAAATTCACTGTTTTTACTCCCCTTTCTTTAGATCTTGGATTATGAAAGTTTTAG
rJMFF028J05+          GAGCCAAAATTCACTGTTTTTACTCCCCTTTCTTTAGATCTTGGATTATGAAAGTTTTAG
                      ____________________________________________________________
consensus             GAGCCAAAATTCACTGTTTTTACTCCCCTTTCTTTAGATCTTGGATTATGAAAGTTTTAG
 
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JMFS154G01-           TCATAGTACATACAGGAAAGATGTAGTTGAAGACTACTATTCCAGTCTATTTAAATTGGA
rJMFF036O01+          TCATAGTACATACAGGAAAGATGTAGTTGAAGACTACTATTCCAGTCTATTTAAATTGGA
rJMSF042I07+          TCATAGTACATACAGGAAAGATGTAGTTGAAGACTACTATTCCAGTCTATTTAAATTGGA
rJMSF036J11+          TCATAGTACATACAGGAAAGATGTAGTTGAAGACTACTATTCCAGTCTATTTAAATTGGA
rJMFF028J05+          TCATAGTACATACAGGAAAGATGTAGTTGAAGACTACTATTCCAGTCTATTTAAATTGGA
                      ____________________________________________________________
consensus             TCATAGTACATACAGGAAAGATGTAGTTGAAGACTACTATTCCAGTCTATTTAAATTGGA
 
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JMFS154G01-           AGAAGATTATGATAAGGTGGCATATCTGTATAGACAGGATACATTGCCCAGAAACACCAC
rJMFF036O01+          AGAAGATTATGATAAGGTGGCATATCTGTATAGACAGGATACATTGCCCAGAAACACCAC
rJMSF042I07+          AGAAGATTATGATAAGGTGGCATATCTGTATAGACAGGATACATTGCCCAGAAACACCAC
rJMSF036J11+          AGAAGATTATGATAAGGTGGCATATCTGTATAGACAGGATACATTGCCCAGAAACACCAC
rJMFF028J05+          AGAAGATTATGATAAGGTGGCATATCTGTATAGACAGGATACATTGCCCAGAAACACCAC
                      ____________________________________________________________
consensus             AGAAGATTATGATAAGGTGGCATATCTGTATAGACAGGATACATTGCCCAGAAACACCAC
 
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JMFS154G01-           TTACAGTCATACTAGGTACGAGGTGGGATTCGAACCGGAAACGCCGACTTCGACAAGATT
rJMFF036O01+          TTACAGTCATACTAGGTACGAGGTGGGATTCGAACCGGAAACGCCGACTTCGACAAGATT
rJMSF042I07+          TTACAGTCATACTAGGTACGAGGTGGGATTCGAACCGGAAACGCCGACTTCGACAAGATT
rJMSF036J11+          TTACAGTCATACTAGGTACGAGGTGGGATTCGAACCGGAAACGCCGACTTCGACAAGATT
rJMFF028J05+          TTACAGTCATACTAGGTACGAGGTGGGATTCGAACCGGAAACGCCGACTTCGACAAGATT
                      ____________________________________________________________
consensus             TTACAGTCATACTAGGTACGAGGTGGGATTCGAACCGGAAACGCCGACTTCGACAAGATT
 
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JMFS154G01-           CAAATGTCAACTCGAATGTTGGTACGATGTAACTCGTGTTAAAGGGTTAATTATATTCTA
rJMFF036O01+          CAAATGTCAACTCGAATGTTGGTACGATGTAACTCGTGTTAAAGGGTTAATTATATTCTA
rJMSF042I07+          CAAATGTCAACTCGAATGTTGGTACGATGTAACTCGTGTTAAAGGGTTAATTATATTCTA
rJMSF036J11+          CAAATGTCAACTCGAATGTTGGTACGATGTAACTCGTGTTAAAGGGTTAATTATATTCTA
rJMFF028J05+          CAAATGTCAACTCGAATGTTGGTACGATGTAACTCGTGTTAAAGGGTTAATTATATTCTA
                      ____________________________________________________________
consensus             CAAATGTCAACTCGAATGTTGGTACGATGTAACTCGTGTTAAAGGGTTAATTATATTCTA
 
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JMFS154G01-           GTGTGGAGCTTTAATT                                            
rJMFF036O01+          GTGTGGAGCTTTAATTATGTGAGTGTCTTGGTCTAA                        
rJMSF042I07+          GTGTGGAGCTTTAATTATGTGAGTGTCTTGGTCTAATTTTATGCATAAATTAT       
rJMSF036J11+          GTGTGGAGCTTTAATTATGTGAGTGTCTTGGTCTAATTTTATGCATAAATTAT       
rJMFF028J05+          GTGTGGAGCTTTAATTATGTGAGTGTCTTGGTCTAATTTTATGCATAAATTATTGATTAT
                      ____________________________________________________________
consensus             GTGTGGAGCTTTAATTATGTGAGTGTCTTGGTCTAATTTTATGCATAAATTATTGATTAT