Contig 005444:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028I02Sequence560005444 (2)ref|XP_006343873.1|9e-52PREDICTED: uncharacterized protein LOC102592873 isoform X1 [Solanum tuberosum] 648005444 (2)ref|XP_009763092.1|3e-77PREDICTED: KAT8 regulatory NSL complex subunit 3 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF028I02-                                                           ATCTTCCCAGAT
                      ____________________________________________________________
consensus                                                             ATCTTCCCAGAT
 
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JMFF028I02-           GTTTGGCGCGAAAATCACTGTATGTATCAACGGAATTAGGGTTCCATTTCCCAAATTCAG
                      ____________________________________________________________
consensus             GTTTGGCGCGAAAATCACTGTATGTATCAACGGAATTAGGGTTCCATTTCCCAAATTCAG
 
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JMFF028I02-           ACCTCCCGGAGCTCGAAGAACGTCATATTTTCTACTGTGGTATCATCCATTAGAGAGGAG
                      ____________________________________________________________
consensus             ACCTCCCGGAGCTCGAAGAACGTCATATTTTCTACTGTGGTATCATCCATTAGAGAGGAG
 
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JMFF028I02-           GATGCCCCTTACGCGTGCTTCAAAGCGCAAGCGCATCAGTGAGGACGGGCTGAAAAATGT
                      ____________________________________________________________
consensus             GATGCCCCTTACGCGTGCTTCAAAGCGCAAGCGCATCAGTGAGGACGGGCTGAAAAATGT
 
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JMFF028I02-           CGAAAAGCAAGAAGAGGAAGAAGCACCTGCAGCAGCATCCAATGAAACGACTGCGTCTAA
                      ____________________________________________________________
consensus             CGAAAAGCAAGAAGAGGAAGAAGCACCTGCAGCAGCATCCAATGAAACGACTGCGTCTAA
 
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JMFF028I02-           AAGCTCATCAGCGAAGAACATAAAAGAGAATGCACCTCTGGTGGTGTTCGCTCATGGCGC
                      ____________________________________________________________
consensus             AAGCTCATCAGCGAAGAACATAAAAGAGAATGCACCTCTGGTGGTGTTCGCTCATGGCGC
 
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JMFF028I02-           CGGTGCTCCTTCCACTTCTGAATGGATGATCAGATGGAAAAACATGTTGGCCAAGGCATT
                      ____________________________________________________________
consensus             CGGTGCTCCTTCCACTTCTGAATGGATGATCAGATGGAAAAACATGTTGGCCAAGGCATT
 
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JMFF028I02-           GAATGCTATTGAGGTCCTAACTTTTGACTACCCATACATTTCTGGTGGAAAGCGGAAAGC
                      ____________________________________________________________
consensus             GAATGCTATTGAGGTCCTAACTTTTGACTACCCATACATTTCTGGTGGAAAGCGGAAAGC
 
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JMFF028I02-           TCCTCCCAAGGCTGAAAAATTGGTTGACTTTCATTCTGATGTTGTAAAAGAGGCAGTAGC
rJMFF028I02+                      TGAAAAATTGGTTGACTTTCATTCTGATGTTGTAAAAGAGGCAGTAGC
                      ____________________________________________________________
consensus             TCCTCCCAAGGCTGAAAAATTGGTTGACTTTCATTCTGATGTTGTAAAAGAGGCAGTAGC
 
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JMFF028I02-           TAAATACCCTAACCATCCACTGATATTAGTTGGGAAATCCATGGGGTCAAGGGTCAGCTG
rJMFF028I02+          TAAATACCCTAACCATCCACTGATATTAGTTGGGAAATCCATGGGGTCAAGGGTCAGCTG
                      ____________________________________________________________
consensus             TAAATACCCTAACCATCCACTGATATTAGTTGGGAAATCCATGGGGTCAAGGGTCAGCTG
 
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JMFF028I02-           CATGGTAG                                                    
rJMFF028I02+          CATGGTAGCCAGTGGACAAGACATTGATGCTTCTGCTGTAGTTTGCTTGGGATACCCACT
                      ____________________________________________________________
consensus             CATGGTAGCCAGTGGACAAGACATTGATGCTTCTGCTGTAGTTTGCTTGGGATACCCACT
 
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rJMFF028I02+          AAAGGGAATAAATGGTGCTGTGAGAGATGAGATACTGCTACAACTTAGAGTTCCCATAAT
                      ____________________________________________________________
consensus             AAAGGGAATAAATGGTGCTGTGAGAGATGAGATACTGCTACAACTTAGAGTTCCCATAAT
 
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rJMFF028I02+          GTTTGTGCAGGGTAGCAAAGATGGACTTTGTCCATTAAATAAACTGGAAGCTGTTAGGAA
                      ____________________________________________________________
consensus             GTTTGTGCAGGGTAGCAAAGATGGACTTTGTCCATTAAATAAACTGGAAGCTGTTAGGAA
 
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rJMFF028I02+          GAAAATGACCTGTGCTAATGAGTTACATGCGATTGAGGGGGGCGATCATTCATTCAAGAT
                      ____________________________________________________________
consensus             GAAAATGACCTGTGCTAATGAGTTACATGCGATTGAGGGGGGCGATCATTCATTCAAGAT
 
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rJMFF028I02+          TGGAAAGAAGCATCTGCAGTTATCTGAAACCACTCAAGAAGAAGCTGAAGATCTTGCTGT
                      ____________________________________________________________
consensus             TGGAAAGAAGCATCTGCAGTTATCTGAAACCACTCAAGAAGAAGCTGAAGATCTTGCTGT
 
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rJMFF028I02+          TCAAGCAGTTGCGACCTTTGTTGCTAATTTGTAAGATATGTGACACTTTGGACAACCTGT
                      ____________________________________________________________
consensus             TCAAGCAGTTGCGACCTTTGTTGCTAATTTGTAAGATATGTGACACTTTGGACAACCTGT
 
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rJMFF028I02+          CAGTCTTTCCATTGTGAGAGAAGACCAGTCGTGGTCATTCTAGTTTTGACCCCATTTTGC
                      ____________________________________________________________
consensus             CAGTCTTTCCATTGTGAGAGAAGACCAGTCGTGGTCATTCTAGTTTTGACCCCATTTTGC
 
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rJMFF028I02+          TAGTGTTTCACCTTGACTTGTAAGCGGAATTTTGTAAAGGAGCATCTAGCTCTTCTGTGG
                      ____________________________________________________________
consensus             TAGTGTTTCACCTTGACTTGTAAGCGGAATTTTGTAAAGGAGCATCTAGCTCTTCTGTGG
 
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rJMFF028I02+          TTTTAGAATGTTTGCGAAAGATGAAAGTTGCTACTTGTAAAATCTGAATTATTAACAAGC
                      ____________________________________________________________
consensus             TTTTAGAATGTTTGCGAAAGATGAAAGTTGCTACTTGTAAAATCTGAATTATTAACAAGC