Contig 005442:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF028C24-                                                                   ATGT
                      ____________________________________________________________
consensus                                                                     ATGT
 
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JMFF028C24-           GTATACACTATACCTTTGCCCCCTTCGTCTACGTTTATCATCTGTTTGATAAAATTCCCC
                      ____________________________________________________________
consensus             GTATACACTATACCTTTGCCCCCTTCGTCTACGTTTATCATCTGTTTGATAAAATTCCCC
 
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JMFF028C24-           TCCAGTTTCAGGGCCACTTTCGCCTCTGTTTGAGAATTACCCCACTGGTTTAAGCCGTCC
                      ____________________________________________________________
consensus             TCCAGTTTCAGGGCCACTTTCGCCTCTGTTTGAGAATTACCCCACTGGTTTAAGCCGTCC
 
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JMFF028C24-           GTGTCCATACATCCATTGGCGATGGCGAATGCTCTTCCCATTCCCACCGATACCTACAAG
                      ____________________________________________________________
consensus             GTGTCCATACATCCATTGGCGATGGCGAATGCTCTTCCCATTCCCACCGATACCTACAAG
 
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JMFF028C24-           TTAGGCTTCATCGGAGCAGGCAAGTTGGCTGAGAGCATTGCGAGAGGCGCTGTCAAGTCG
                      ____________________________________________________________
consensus             TTAGGCTTCATCGGAGCAGGCAAGTTGGCTGAGAGCATTGCGAGAGGCGCTGTCAAGTCG
 
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JMFF028C24-           GGCTTATTGCCGCCTTCTCGTATTCGAACTGCCCACACCGGCCCCGCTCGCCGCACTGCC
                      ____________________________________________________________
consensus             GGCTTATTGCCGCCTTCTCGTATTCGAACTGCCCACACCGGCCCCGCTCGCCGCACTGCC
 
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JMFF028C24-           TTCGAGTCATTTGGTGCCACTGTGTACGACCATAACAAGCAGGTTGTTGAAGATAGTGAT
                      ____________________________________________________________
consensus             TTCGAGTCATTTGGTGCCACTGTGTACGACCATAACAAGCAGGTTGTTGAAGATAGTGAT
 
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JMFF028C24-           GTGATCATATTCTCTGTGAAGCCTCAAATAGTTAAAGAGGTGTTATCACAAGCTAAACCC
                      ____________________________________________________________
consensus             GTGATCATATTCTCTGTGAAGCCTCAAATAGTTAAAGAGGTGTTATCACAAGCTAAACCC
 
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JMFF028C24-           ATTCTGACTAAGAAGCAACTTCTGGTGTCTGTTGCTGCAGGTGTCAAATTAAAAGATTTG
rJMFF028C24+                                         TTGCTGCAGGTGTCAAATTAAAAGATTTG
                      ____________________________________________________________
consensus             ATTCTGACTAAGAAGCAACTTCTGGTGTCTGTTGCTGCAGGTGTCAAATTAAAAGATTTG
 
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JMFF028C24-           CAGGAATGGGCAGGTAGTAATAAATTTATTAGGGTGATGCCAAACACTCCTGCAGCAGTT
rJMFF028C24+          CAGGAATGGGCAGGTAGTAATAAATTTATTAGGGTGATGCCAAACACTCCTGCAGCAGTT
                      ____________________________________________________________
consensus             CAGGAATGGGCAGGTAGTAATAAATTTATTAGGGTGATGCCAAACACTCCTGCAGCAGTT
 
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JMFF028C24-           GGCGAGGCAGCTTCTGT                                           
rJMFF028C24+          GGCGAGGCAGCTTCTGTGATTACCTTGGGGAGTGGTGCAACAAAAGAAGATGCAGAACTG
                      ____________________________________________________________
consensus             GGCGAGGCAGCTTCTGTGATTACCTTGGGGAGTGGTGCAACAAAAGAAGATGCAGAACTG
 
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rJMFF028C24+          ATTTCATCGTTGTTTGGAGCTATTGGTAAAGTGTGGAAAGCTGATGAGAAACTGTTTGAT
                      ____________________________________________________________
consensus             ATTTCATCGTTGTTTGGAGCTATTGGTAAAGTGTGGAAAGCTGATGAGAAACTGTTTGAT
 
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rJMFF028C24+          GCAGTGACAGGTCTGAGCGGAAGTGGACCAGCTTATATATATTTAGCTATAGAGGCATTG
                      ____________________________________________________________
consensus             GCAGTGACAGGTCTGAGCGGAAGTGGACCAGCTTATATATATTTAGCTATAGAGGCATTG
 
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rJMFF028C24+          GCTGATGGAGGAGTGGCTGCTGGTCTTCCTCGAGACCTTGCACTCGGTCTAGCTTCTCAA
                      ____________________________________________________________
consensus             GCTGATGGAGGAGTGGCTGCTGGTCTTCCTCGAGACCTTGCACTCGGTCTAGCTTCTCAA
 
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rJMFF028C24+          ACTGTACTAGGGGCAGCATCCATGGCAACCAATGCAGGGAAGCACCCTGGTCAACTTAAA
                      ____________________________________________________________
consensus             ACTGTACTAGGGGCAGCATCCATGGCAACCAATGCAGGGAAGCACCCTGGTCAACTTAAA
 
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rJMFF028C24+          GATGATGTTACATCACCAGGTGGGACTACCATAGCTGGAGTTCATGAGCTCGAGAAGGCT
                      ____________________________________________________________
consensus             GATGATGTTACATCACCAGGTGGGACTACCATAGCTGGAGTTCATGAGCTCGAGAAGGCT
 
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rJMFF028C24+          GGATTTCGCGGGACATTAATGAATGCTGTTGTAGCTGCAACAAAGCGCAGTCGAGAACTT
                      ____________________________________________________________
consensus             GGATTTCGCGGGACATTAATGAATGCTGTTGTAGCTGCAACAAAGCGCAGTCGAGAACTT
 
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rJMFF028C24+          TCTCAGAACTAATTCAACTTTTTTTCTGCATGCTCACATACTATCTGGCTTAGAAACTTA
                      ____________________________________________________________
consensus             TCTCAGAACTAATTCAACTTTTTTTCTGCATGCTCACATACTATCTGGCTTAGAAACTTA
 
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rJMFF028C24+          AAATTCTGCAATTAGTTCTCTATTTTACTGATAAATTGAGGCTCCAGGACCATCTGTTTT
                      ____________________________________________________________
consensus             AAATTCTGCAATTAGTTCTCTATTTTACTGATAAATTGAGGCTCCAGGACCATCTGTTTT
 
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rJMFF028C24+          GAGTATCAATCTCATATTTGTTTTGTGCTTCTTCAGAAATCATTACCAANCAAAAAGAAA
                      ____________________________________________________________
consensus             GAGTATCAATCTCATATTTGTTTTGTGCTTCTTCAGAAATCATTACCAANCAAAAAGAAA