Contig 005438:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027L06Sequence522000818 (2)ref|XP_009774309.1|2e-48PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris]748005438 (2)emb|CDP05735.1|2e-86unnamed protein product [Coffea canephora]
JMSF030N21Sequence622000818 (2)ref|XP_009774309.1|2e-52PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris]705005438 (2)emb|CDP05735.1|4e-75unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF027L06+                                         TGGGTGCATGAAATCTGGTCCTGTCCTTG
                      ____________________________________________________________
consensus                                            TGGGTGCATGAAATCTGGTCCTGTCCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+                 GGGAGTGAGATACTATGAGCCCGAGCNCTGGAAATTTGGCGAGGGAGGGAACA
rJMFF027L06+          CTCAGAAGGGAGTGAGATACTATGAGCCCGAGCACTGGAAATTTGGCGAGGGAGGGAACA
                      ____________________________________________________________
consensus             CTCAGAAGGGAGTGAGATACTATGAGCCCGAGCACTGGAAATTTGGCGAGGGAGGGAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          GGTATTTCCGTCATGCCACTGGGCAGCTATATGCCATTTCGAAGGATTTAGCCACCTACA
rJMFF027L06+          GGTATTTCCGTCATGCCACTGGGCAGCTATATGCCATTTCGAAGGATTTAGCCACCTACA
                      ____________________________________________________________
consensus             GGTATTTCCGTCATGCCACTGGGCAGCTATATGCCATTTCGAAGGATTTAGCCACCTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          TTTCGATAAACGAGAATGTGCTACATAAATACGTTAATGAAGATGTTGCTCTGGGATCTT
rJMFF027L06+          TTTCGATAAACGAGAATGTGCTACATAAATACGTTAATGAAGATGTTGCTCTGGGATCTT
                      ____________________________________________________________
consensus             TTTCGATAAACGAGAATGTGCTACATAAATACGTTAATGAAGATGTTGCTCTGGGATCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          GGCTCATTGGACTGGATGTAGAACACATCCACGACCGCCAATGGTGCTGTGGAACTCCGC
rJMFF027L06+          GGCTCATTGGACTGGATGTAGAACACATCCACGACCGCCAATGGTGCTGTGGAACTCCGC
                      ____________________________________________________________
consensus             GGCTCATTGGACTGGATGTAGAACACATCCACGACCGCCAATGGTGCTGTGGAACTCCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          CCGACTGTAAATGGAAGGCTCAGGCAGGCAACATATGTGTTGCTTCGTTTGATTGGAGAT
rJMFF027L06+          CCGACTGTGAATGGAAGGCTCAGGCAGGCAACATATGTGTTGCTTCGTTTGATTGGAGAT
                      ____________________________________________________________
consensus             CCGACTGTGAATGGAAGGCTCAGGCAGGCAACATATGTGTTGCTTCGTTTGATTGGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          GCAGTGGGATTTGCGGGTCGGTGGAAAGGATCAAGGAGGTCCACCGACGGTGTGGGGAAG
rJMFF027L06+          GCAGTGGGATTTGCGGGTCGGTGGAAAGGATCAAGGAGGTCCACCGACGGTGTGGGGAAG
                      ____________________________________________________________
consensus             GCAGTGGGATTTGCGGGTCGGTGGAAAGGATCAAGGAGGTCCACCGACGGTGTGGGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          GCGAGAAAGAGTTGTGGAATGCCGTCTTCTGACCAAACCTCGATCTAGAGGTAGTGTTGG
rJMFF027L06+          GCGAGAAAGAGTTGTGGAATGCCGTCTTCTGACCAAACCTCGATCTAGAGGTAGTGTTGG
                      ____________________________________________________________
consensus             GCGAGAAAGAGTTGTGGAATGCCGTCTTCTGACCAAACCTCGATCTAGAGGTAGTGTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          CAAGCTAAGATTGCAGGTCTATATATCGATTGTGATCCGATCTGTGGATTATATTGTTTC
rJMFF027L06+          CAAGCTAAGATTGCAGGTCTATATATCGATTGTGATCCGATCTGTGGATTATATTGTTTC
                      ____________________________________________________________
consensus             CAAGCTAAGATTGCAGGTCTATATATCGATTGTGATCCGATCTGTGGATTATATTGTTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          TTCAATTCCTTGATTTTTCTGGAATATGAATCTATAGAATATATACTTATGTGCTTACCC
rJMFF027L06+          TTCAATTCCTTGATTTTTCTGGAATATGAATCTATAGAATATATACTTATGTGCTTACCC
                      ____________________________________________________________
consensus             TTCAATTCCTTGATTTTTCTGGAATATGAATCTATAGAATATATACTTATGTGCTTACCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          TCAAGAAAGTGAGAGGTTGGTGTGGATCTAATCCATTTTAGGAGAGGAGAAAGATCATTG
rJMFF027L06+          TCAAGAAAGTGAGAGGTTGGTGTGGATCTAATCCATTTTAGGAGAGGAGAAAGATCATTG
                      ____________________________________________________________
consensus             TCAAGAAAGTGAGAGGTTGGTGTGGATCTAATCCATTTTAGGAGAGGAGAAAGATCATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          AAGCAGCCAGTAGAGATGCAAATTAAATGTCAAAAATCATTGCTTTTTTTTAGATGTTTA
rJMFF027L06+          AAGCAGCCAGTAGAGATGCAAATTAAATGTCAAAAATCATTGC-TTTTTTTAGATGTTTA
                      ____________________________________________________________
consensus             AAGCAGCCAGTAGAGATGCAAATTAAATGTCAAAAATCATTGCTTTTTTTTAGATGTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030N21+          GACTTAGGAAACAAAATTTGTTACTTTAATTTGTATGTCTCTGAATATATAT        
rJMFF027L06+          GACTTAGGAAACAAAATTTGTTACTTTAATTTGTATGTCTCTGAATATATATGTATAGTA
                      ____________________________________________________________
consensus             GACTTAGGAAACAAAATTTGTTACTTTAATTTGTATGTCTCTGAATATATATGTATAGTA