Contig 005437:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS064A05-                                              TCACGCATGTTTTTAACTCCAGCCA
                      ____________________________________________________________
consensus                                                TCACGCATGTTTTTAACTCCAGCCA
 
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JMFS064A05-           CTACGATTGGGACGGTGGTCGCTGCTACTTGCAGCCGGAATGATAGACTAGCGTGGTTCA
                      ____________________________________________________________
consensus             CTACGATTGGGACGGTGGTCGCTGCTACTTGCAGCCGGAATGATAGACTAGCGTGGTTCA
 
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JMFS064A05-           CACGAAGACTTGATATAGAGGTGCAAACTACCGACCATGTGGGGATCGCCACGCTCGACA
JMFS081B03-                                                     GGATCGCCACGCTCGACA
                      ____________________________________________________________
consensus             CACGAAGACTTGATATAGAGGTGCAAACTACCGACCATGTGGGGATCGCCACGCTCGACA
 
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JMFS064A05-           TGTATATCTTCCCGATTATGCATAACAGCCGGTTCTTCATGATCAGCATCAGCTTCAAGC
rJMSF044O03+                                             TTCATGATCAGCATCAGTTTCAAGC
JMFS081B03-           TGTATATCTTCCCGATTATGCATAACAGCCGGTTCTTCATGATCAGCATCAGCTTCAAGC
                      ____________________________________________________________
consensus             TGTATATCTTCCCGATTATGCATAACAGCCGGTTCTTCATGATCAGCATCAGCTTCAAGC
 
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JMFS064A05-           ATGGGACCTTTGACATTATTGACAGCGCTCCAGCTGTCAGCGATAGCATAGAGATATACG
rJMSF044O03+          ATGGGACCTTTGACATTATTGACAGCGCTCCAGCGGTCAGCGATAGCATAGAGATATACG
JMFS081B03-           ATGGGACCTTTGACATTATTGACAGCGCTCCAGCTGTCAGCGATAGCATAGAGATATACG
                      ____________________________________________________________
consensus             ATGGGACCTTTGACATTATTGACAGCGCTCCAGCTGTCAGCGATAGCATAGAGATATACG
 
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JMFS064A05-           GACGCATCCCGGGGGAATT--------GAGGGACCTCCTAGCTGCATATCTCGAGAGAAA
rJMSF044O03+          GACGCATCCCGGGGGAATTGCATTACAGAGGGACCTCCTAGCTGCATATCTCGAGAGAAA
JMFS030E11+                                                                  AGAAA
JMFS042G11+                                                                  AGAAA
JMFS081B03-           GACGCATCCCGGGGGAATT--------GAGGGACCTCCTAGCTGCATATCTCGAGAGAAA
rJMSF026E13+                                     GAGGGACCTCCTAGCTGCATATCTCGAGAGAAA
rJMFF027K16+                                                TAGCTGCATATCTCGAGAGAAA
                      ____________________________________________________________
consensus             GACGCATCCCGGGGGAATT--------GAGGGACCTCCTAGCTGCATATCTCGAGAGAAA
 
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JMFS064A05-           ACAACAGTCGGTGCGTGCACTACGTCTGAGGCATATGCAACCTAAAAGGATGATGGTGGC
rJMSF044O03+          ACAACAGCCGGTGCGTGCACTACGTCTGAGGGACATGCAACCTAAAAGGATGATGGTGGC
JMFS030E11+           ACAACAGTCGGTGCGTGCACTACGTCTGAGGCATATGCAACCTAAAAGGATGATGGTGGC
JMFS042G11+           ACAACAGTCGGTGCGTGCACTACGTCTGAGGCATATGCAACCTAAAAGGATGATGGTGGC
JMFS081B03-           ACAACAGTCGGTGCGTGCACTACGTCTGAGGCATATGCAACCTAAAAGGATGATGGTGGC
rJMSF026E13+          ACAACAGTCGGTGCGTGCACTACGTCTGAGGCATATGCAACCTAAAAGGATGATGGTGGC
rJMFF027K16+          ACANCAGTCGGTGCGTGCACTACGTCTGAGGCATATGCAACCTAAAAGGATGATGGTGGC
                      ____________________________________________________________
consensus             ACAACAGTCGGTGCGTGCACTACGTCTGAGGCATATGCAACCTAAAAGGATGATGGTGGC
 
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JMFS064A05-           ATGGGGAGAACCCACTGCCGGTGTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
rJMSF044O03+          ATGGGGAGAACCCACGGCCGGTGTAGAGTCAGCGGTATATACGATGAGACACATGGAGGA
JMFS030E11+           ATGGGGAGAACCCACTGCCGGTGTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
JMFS042G11+           ATGGGGAGAACCCACTGCCGGTGTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
JMFS081B03-           ATGGGGAGAACCCACTGCCGGTGTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
rJMSF026E13+          ATGGGGAGAACCCACTGCCGGTGTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
JMFS131B04+                                     AGTCAGCGGTATATACGATGAGGCACATGGAGTC
JMFS063F06-                                 GTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
JMFS089H03-                                                           GCACATGGAGTC
JMFS103F03-                                           CGGTATATACGATGAGGCACATGGAGTC
rJMFF027K16+          ATGGGGAGAACCCACTGCCGGTGTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
                      ____________________________________________________________
consensus             ATGGGGAGAACCCACTGCCGGTGTAGAGTCAGCGGTATATACGATGAGGCACATGGAGTC
 
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JMFS064A05-           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
rJMSF044O03+          ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGTGCGGCGCT
JMFS030E11+           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
JMFS042G11+           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
JMFS081B03-           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
rJMSF026E13+          ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
JMFS131B04+           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
JMFS063F06-           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
JMFS089H03-           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
JMFS103F03-           ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
rJMFF027K16+          ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
                      ____________________________________________________________
consensus             ATATGTTGGTCAGAAATCCACCACCTGGTATTGCGGGCTACAAGCAGGGGGCGCGCCGCT
 
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JMFS064A05-           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCANATGTCCA
rJMSF044O03+          GATGCTCAACCTTCGCAAGCGTTTCCTGCACAACATCATCCTCAGCGCCGCAAATGTCCA
JMFS030E11+           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
JMFS042G11+           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
JMFS081B03-           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
rJMSF026E13+          GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
JMFS131B04+           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
JMFS063F06-           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
JMFS089H03-           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
rJMSF027E13+                                    TGCATAACATCATCCTCAGCGCCGCAAATGTCCA
JMFS103F03-           GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
rJMFF027K16+          GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
                      ____________________________________________________________
consensus             GATGCTCAACCTTCGCAAGCGTTTCCTGCATAACATCATCCTCAGCGCCGCAAATGTCCA
 
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JMFS064A05-           CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
rJMSF044O03+          CGTGCAAAATATTATCGCACGTGTGGGGGAGTACGACCGCATGAGGGCTGCACAGATGCT
JMFS030E11+           CGTGCAAAATATTATCGCACGTGTG                                   
JMFS042G11+           CGTGCAAAATATTATCGCACGTGTG                                   
JMFS081B03-           CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
rJMSF026E13+          CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
JMFS131B04+           CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
JMFS063F06-           CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
JMFS089H03-           CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
rJMSF027E13+          CGTGCAAAATATTATCGCACGNGTGGGAGAGTCCGATCGCGTGAGGGTTTCACAGATGCT
JMFS103F03-           CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
rJMFF027K16+          CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
                      ____________________________________________________________
consensus             CGTGCAAAATATTATCGCACGTGTGGGAGAGTACGATCGCGTGAGGGTTTCACAGATGCT
 
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JMFS064A05-           TC                                                          
rJMSF044O03+          CCAATCAACGGCGCGCCAACCGTCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
JMFS081B03-           TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
rJMSF026E13+          TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
JMFS131B04+           TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
JMFS063F06-           TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
JMFS089H03-           TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
rJMSF027E13+          TCAATCAACGACGCGCCAACCGNCCTAACANCNGCNTAGGGGGCAGCTCTGAAAAGCAAT
JMFS103F03-           TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
rJMFF027K16+          TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
                      ____________________________________________________________
consensus             TCAATCAACGACGCGCCAACCGGCCTAACAACTGCCTAGGGGGCAGCTCTGAAAAGCAAT
 
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rJMSF044O03+          AGTTAATAAACTGGGAC                                           
JMFS081B03-           AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
rJMSF026E13+          AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
JMFS131B04+           AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
JMFS063F06-           AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
JMFS089H03-           AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
rJMSF027E13+          AGTTAATAAACTGGGACCTTCAATCATTGTGNCCGNTTGCAGTAGTCGGTTAACTTATCC
JMFS103F03-           AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
rJMFF027K16+          AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
                      ____________________________________________________________
consensus             AGTTAATAAACTGGGACCTTCAATCATTGTGACCGATTGCAGTAGTCGGTTAACTTATCC
 
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JMFS081B03-           TTTTTGCAAACATAATC                                           
rJMSF026E13+          TTTTTGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
JMFS131B04+           TTTTTGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
JMFS063F06-           TTTTTGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
JMFS089H03-           TTTTTGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
rJMSF027E13+          TTTNAGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
JMFS103F03-           TTTTTGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
rJMFF027K16+          TTTTTGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
                      ____________________________________________________________
consensus             TTTTTGCAAACATAATCTGTGTAGGTGTGTAGTCTTGTTGTGCTAAATAGGGGTGCACCT
 
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rJMSF026E13+          CCATTTAGCATATAATAAACAGTGCATCACTGGGCTCTTTTTGTTGGCGGTGCAGCCCGT
JMFS131B04+           CCATTTAGCATATAATAAACAGTGCATCACTGGGCTCTTTTTGTTGGCGGTGCAGCCCGT
JMFS063F06-           CCATTTAGCATATAATAAACAGTGCATCACTGGGCTCTTTTTGTTGGCGGTGCAGCCCGT
JMFS089H03-           CCATTTAGCATATAATAAACAGTGCATCACTGGGCTCTTTTTGTTGGCGGTGCAGCCCGT
rJMSF027E13+          CCATTCAGCATATAATAAACANTGCATCNCTGGGCTCTTTTTGTTGGCGGTGCANCCCGT
JMFS103F03-           CCATTTAGCATATAATAAACAGTGCATCACTGGGCTCTTTTTGTTGGCGGTGCAGCCCGT
rJMFF027K16+          CCATTTAGCATATAATAAACAGTGCATCACTGGGCTCTTTTTGTTGGCGGTGCAGCCCGT
                      ____________________________________________________________
consensus             CCATTTAGCATATAATAAACAGTGCATCACTGGGCTCTTTTTGTTGGCGGTGCAGCCCGT
 
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rJMSF026E13+          TGTTTCGGGTGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTCTACAGGCGGGA
JMFS131B04+           TGTTTCGGGTGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTCTACAGGCGGGA
JMFS063F06-           TGTTTCGGGTGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTCTACAGGCGGGA
JMFS089H03-           TGTTTCGGGTGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTCTACAGGCGGGA
rJMSF027E13+          TGTTNCGGGNGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTNTACAGGCGGGA
JMFS103F03-           TGTTTCGGGTGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTCTACAGGCGGGA
rJMFF027K16+          TGTTTCGGGTGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTCTACAGGCGGGA
                      ____________________________________________________________
consensus             TGTTTCGGGTGGCGGTGCGATGCAGTTCGCTATTACTAAATCTATCCTCTACAGGCGGGA
 
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rJMSF026E13+          CATATACTCTCTTTCGTGTTTCTTGCTATGTTAAACGAATATGAGATGAATACTTAACAT
JMFS131B04+           CATATACTCTCTTTCGTGTTTCTTGCTATGTTAAACGAATATGAGATGAATACTTAACAT
JMFS063F06-           CATATACTCTCTTTCGTGTTTCTTGCTATGTTAAACGAATATGAGATGAATACTTAACAT
JMFS089H03-           CATATACTCTCTTTCGTGTTTCTTGCTATGTTAAACGAATATGAGATGAATACTTAACAT
JMFS103F03-           CATATACTCTCTTTCGTGTTTCTTGCTATGTTAAACGAATATGAGATGAATACTTAACAT
rJMFF027K16+          CATATACTCTCTTTCGTGTTTCTTGCTATGTTAAACGAATATGAGATGAATACTTAACAT
                      ____________________________________________________________
consensus             CATATACTCTCTTTCGTGTTTCTTGCTATGTTAAACGAATATGAGATGAATACTTAACAT
 
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rJMSF026E13+          TATATTTCTAGGTGCCAGTGGTGCATTACTATGTATACG                     
JMFS131B04+           TATATTTCTAGGTG-C                                            
JMFS063F06-           TATATTTCT                                                   
JMFS089H03-           T                                                           
JMFS103F03-           TATATTTCTAGGTG-C                                            
rJMFF027K16+          TATATTTCTAGGTG-CAGTGGTGCATTACTATGTATACGTATCCTACCAATATANTAATA
                      ____________________________________________________________
consensus             TATATTTCTAGGTG-CAGTGGTGCATTACTATGTATACGTATCCTACCAATATANTAATA