Contig 005436:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF027J11+                                                      ACCACTTGATATTCTG
                      ____________________________________________________________
consensus                                                         ACCACTTGATATTCTG
 
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rJMFF040G24+                                        GGTTTCCTGGCCAGCTTAACTCTGATCTCC
rJMFF027J11+          TAACCATGTCTGGTGTTACCTGCTGCCTGAGGTTTCCTGGCCAGCTTAACTCTGATCTCC
                      ____________________________________________________________
consensus             TAACCATGTCTGGTGTTACCTGCTGCCTGAGGTTTCCTGGCCAGCTTAACTCTGATCTCC
 
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rJMFF040G24+          GGAAACTTGCTGTGAACCTCATTCCATTCCCCCGTCTTCACTTCTTCATGGTCGGTTTTG
rJMFF027J11+          GGAAACTTGCTGTGAACCTCATTCCATTCCCCCGTCTTCACTTCTTCATGGTCGGTTTTG
                      ____________________________________________________________
consensus             GGAAACTTGCTGTGAACCTCATTCCATTCCCCCGTCTTCACTTCTTCATGGTCGGTTTTG
 
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rJMFF040G24+          CTCCTCTTACCTCGAGAGGATCTCAACAATATAGTGCACTGACTGTCCCTGAGCTGACAC
rJMFF027J11+          CTCCTCTTACCTCGAGAGGATCTCAACAATATAGTGCACTGACTGTCCCTGAGCTGACAC
                      ____________________________________________________________
consensus             CTCCTCTTACCTCGAGAGGATCTCAACAATATAGTGCACTGACTGTCCCTGAGCTGACAC
 
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rJMFF040G24+          AGCAAATGTGGGATGCGAAGAACATGATGTGTGCAGCTGATCCTCGACACGGGCGCTACT
rJMFF027J11+          AGCAAATGTGGGATGCGAAGAACATGATGTGTGCAGCTGATCCTCGACACGGGCGCTACT
                      ____________________________________________________________
consensus             AGCAAATGTGGGATGCGAAGAACATGATGTGTGCAGCTGATCCTCGACACGGGCGCTACT
 
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rJMFF040G24+          TGACAGCTTCAGCTATCTTCCGTGGGAAGATGAGCACGAAGGAGGTTGATGAACAGATGC
rJMFF027J11+          TGACAGCTTCAGCTATCTTCCGTGGGAAGATGAGCACGAAGGAGGTTGATGAACAGATGC
                      ____________________________________________________________
consensus             TGACAGCTTCAGCTATCTTCCGTGGGAAGATGAGCACGAAGGAGGTTGATGAACAGATGC
 
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rJMFF040G24+          TGAACGTGCAGAACAAGAACTCTTCCTATTTTGTGGAGTGGATTCCCAACAATATGAAAT
rJMFF027J11+          TGAACGTGCAGAACAAGAACTCTTCCTATTTTGTGGAGTGGATTCCCAACAATATGAAAT
                      ____________________________________________________________
consensus             TGAACGTGCAGAACAAGAACTCTTCCTATTTTGTGGAGTGGATTCCCAACAATATGAAAT
 
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rJMFF040G24+          CAACCGTGTGTGACATCCCGCCAACTGGTCTCAAGATGGCATCCACATTCATCGGGAACT
rJMFF027J11+          CAACCGTGTGTGACATCCCGCCAACTGGTCTCAAGATGGCATCCACATTCATCGGGAACT
                      ____________________________________________________________
consensus             CAACCGTGTGTGACATCCCGCCAACTGGTCTCAAGATGGCATCCACATTCATCGGGAACT
 
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rJMFF040G24+          CAACTTCGATCCAAGAAATGTTCCGTCGGGTGAGCGAGCAGTTTACTGCCATGTTCAGGA
rJMFF027J11+          CAACTTCGATCCAAGAAATGTTCCGTCGGGTGAGCGAGCAGTTTACTGCCATGTTCAGGA
                      ____________________________________________________________
consensus             CAACTTCGATCCAAGAAATGTTCCGTCGGGTGAGCGAGCAGTTTACTGCCATGTTCAGGA
 
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rJMFF040G24+          GAAAGGCTTTCTTGCACTGGTACACCGGGTAGGGAATGGATGAGATGGAGTTCACGGAGG
rJMFF027J11+          GAAAGGCTTTCTTGCACTGGTACACCGGGTAGGGAATGGATGAGATGGAGTTCACGGAGG
                      ____________________________________________________________
consensus             GAAAGGCTTTCTTGCACTGGTACACCGGGTAGGGAATGGATGAGATGGAGTTCACGGAGG
 
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rJMFF040G24+          CGGAGAGCAACATGAACGATCTGGTTGCGGAGTACCAGCAGTACCAGGATGCAACAGCTG
rJMFF027J11+          CGGAGAGCAACATGAACGATCTGGTTGCGGAGTACCAGCAGTACCAGGATGCAACAGCTG
                      ____________________________________________________________
consensus             CGGAGAGCAACATGAACGATCTGGTTGCGGAGTACCAGCAGTACCAGGATGCAACAGCTG
 
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rJMFF040G24+          ATGA                                                        
rJMFF027J11+          ATGAGGATGAGTACGAGGGTGAAGAGGAAGAAGAGTATGAGGATTGATTGATCCCATATG
                      ____________________________________________________________
consensus             ATGAGGATGAGTACGAGGGTGAAGAGGAAGAAGAGTATGAGGATTGATTGATCCCATATG
 
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rJMFF027J11+          CACAAGTTTTACATACCTGTCTGTAGGATTATGATGTTGTATTGACAATGTCAAAACCAT
                      ____________________________________________________________
consensus             CACAAGTTTTACATACCTGTCTGTAGGATTATGATGTTGTATTGACAATGTCAAAACCAT