Contig 005434:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027C19Sequence270000340 (3)ref|XP_006366754.1|6e-41PREDICTED: dihydrofolate reductase-like [Solanum tuberosum]567005434 (3)ref|XP_011079224.1|7e-55PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]
JMFF027F03Sequence546000340 (3)ref|XP_011079224.1|6e-93PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]678005434 (3)ref|XP_011079224.1|4e-83PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]
JMSF033O02Sequence747005434 (3)ref|XP_011079224.1|4e-70PREDICTED: UPF0483 protein C25G4.2-like [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+                             AGATGGAATATTTCCAGCAGGGGGAGAATCATCCATAGAAG
                      ____________________________________________________________
consensus                                AGATGGAATATTTCCAGCAGGGGGAGAATCATCCATAGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          GCATATTTCCACCTCCTTATTTTGAGTGGTTTCAGTTCAACGAGGATTTCACAGAATACC
                      ____________________________________________________________
consensus             GCATATTTCCACCTCCTTATTTTGAGTGGTTTCAGTTCAACGAGGATTTCACAGAATACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          AACTTGGAAGAGTGCATCTCCTACTTGTGTCAGTACATCACAAGCAACGGCCCTTTCCAT
                      ____________________________________________________________
consensus             AACTTGGAAGAGTGCATCTCCTACTTGTGTCAGTACATCACAAGCAACGGCCCTTTCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          GGCCTGCTAGGCTTCTCCCAGGCATGTTCCCATCCCACTAAAATCATACATAAATTTGAT
                      ____________________________________________________________
consensus             GGCCTGCTAGGCTTCTCCCAGGCATGTTCCCATCCCACTAAAATCATACATAAATTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          GCAAAAAAAGACATTTTGATGAAATTAATAATGTTTCAGGGAGCAACCATAGCAGCCCTT
rJMFF027F03+                                              CAGGGAGCAACCATAGCAGCCCTT
rJMFF027C19+                                          CTCCCAGGGAGCAACCATAGCAGCCCTT
                      ____________________________________________________________
consensus             GCAAAAAAAGACATTTTGATGAAATTAATAATGTTTCAGGGAGCAACCATAGCAGCCCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          TTGGCAGGTTATCAAGCAGAGGGGAAGATACTGAAAGATCATCCACCCTTTAAACTGCTG
rJMFF027F03+          TTGGCAGGTTATCAAGCAGAGGGGAAGATACTGAAAGATCATCCACCCTTTAAACTGCTG
rJMFF027C19+          TTGGCAGGTTATCAAGCAGAGGGGAAGATACTGAAAGATCATCCACCCTTTAAACCGCTG
                      ____________________________________________________________
consensus             TTGGCAGGTTATCAAGCAGAGGGGAAGATACTGAAAGATCATCCACCCTTTAAACTGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          GTATCCATTTCAGGTTCCAAATTTCGTGAGCCAACCATTTGCCAGGTTGCATACAAACAC
rJMFF027F03+          GTATCCATTTCAGGTTCCAAATTTCGTGAGCCAACCATTTGCCAGGTTGCATACAAACAC
rJMFF027C19+          GTATCCATTTCAGGTTCCAAATTTCGTGACCCAACCATTTGCCAGGTTGCATACAAACAC
                      ____________________________________________________________
consensus             GTATCCATTTCAGGTTCCAAATTTCGTGAGCCAACCATTTGCCAGGTTGCATACAAACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          CCCATGAAGGTTAAGTCGGTGCATTTCATAGGAGAGAAGGACTGGCTGAAGCTGCCTTCC
rJMFF027F03+          CCCATGAAGGTTAAGTCGGTGCATTTCATAGGAGAGAAGGACTGGCTGAAGCTGCCTTCC
rJMFF027C19+          CCCATGAAGGTTAAGTCGGTGCATTTCATAGGAGAGAAGGACTGGCTGAAGCTGCCTTCC
                      ____________________________________________________________
consensus             CCCATGAAGGTTAAGTCGGTGCATTTCATAGGAGAGAAGGACTGGCTGAAGCTGCCTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          CAGGAGCTGGCCACCGCCTTTCACAACCCTCTCATCATCAACCATCCCCAGGGCCACACT
rJMFF027F03+          CAGGAGCTGGCCACCGCCTTTCACAACCCTCTCATCATCAACCATCCCCAGGGCCACACT
rJMFF027C19+          CAGGAGCTGGCCACCGCCTTTCACAACCCTCTCATCATCAACCATCCCCAGGGCCACACT
                      ____________________________________________________________
consensus             CAGGAGCTGGCCACCGCCTTTCACAACCCTCTCATCATCAACCATCCCCAGGGCCACACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          GTGCCCAGGCTAAATGAAGAAGCTGTGGAGAAGTTGAGGAATTGGACTAAGGAAATTGTG
rJMFF027F03+          GTGCCCAGGCTAAATGAAGAAGCTGTGGAGAAGTTGAGGAATTGGACTAAGGAAATTGTG
rJMFF027C19+          GTGCCCAGGCTAAATGAAGAAGCTGTGGAGAAGTTGAGGAATTGGACTAAGGAAATTGTG
                      ____________________________________________________________
consensus             GTGCCCAGGCTAAATGAAGAAGCTGTGGAGAAGTTGAGGAATTGGACTAAGGAAATTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          GATGAAACCCTAGATGATGATGATGATGATGTTATAAAACATGAGACAGTGGAGAATAAT
rJMFF027F03+          GATGAAACCCTAGATGATGATGATGATGATGTTATAAAACATGAGACAGTGGAGAATAAT
rJMFF027C19+          GATGAAACCCTAGATGATGATGATGATGATGTTATAAAACATGAGACAGTGGAGAATAAT
                      ____________________________________________________________
consensus             GATGAAACCCTAGATGATGATGATGATGATGTTATAAAACATGAGACAGTGGAGAATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          GGAGAAGCAGATCTCCTACAGATGTCCAAGAATGAAATATCATTAATCTCGGAAACCTAA
rJMFF027F03+          GGAGAAGCAGATCTCCTACAGATGTCCAAGAATGAAATATCATTAATCTCGGAAACCTAA
rJMFF027C19+          GGAGAAGCAGATCTCCTACAGATGTCCAAGAATGAAATATCATTAATCTCGGAAACCTAA
                      ____________________________________________________________
consensus             GGAGAAGCAGATCTCCTACAGATGTCCAAGAATGAAATATCATTAATCTCGGAAACCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF033O02+          TTGAAAATTTATGTAGTATACCGGATTATTAATGTTTCAGATATGT              
rJMFF027F03+          TTGAAAATTTATGTAGTATA-CGGATTATTAATGTTTCAGATATGTTATTAAAAACTTGA
rJMFF027C19+          TTGAAAATTTATGTAGTATA-CGGATTATTAATGTTTCAGATATGTTATTAAAAACTTGA
                      ____________________________________________________________
consensus             TTGAAAATTTATGTAGTATA-CGGATTATTAATGTTTCAGATATGTTATTAAAAACTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF027F03+          ATAATATTATGAATGCTGTGGAGTTATAAATATTAGGGGAACTCTGTCTGGGATTGGC  
rJMFF027C19+          ATAATATTATGAATGCTGTGGAGTTATAAATATTAGGGGAACTCTGTCTGGGATTGGCTT
                      ____________________________________________________________
consensus             ATAATATTATGAATGCTGTGGAGTTATAAATATTAGGGGAACTCTGTCTGGGATTGGCTT