| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005O09 | Sequence | 470 | 003515 (9) | ref|XP_009600118.1| | 7e-58 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 667 | 005424 (9) | ref|NP_001234620.1| | 2e-98 | beta-mannosidase enzyme precursor [Solanum lycopersicum] gb|AAL37714.1|AF403444_ |
| JMFF025E19 | Sequence | 528 | 003515 (9) | ref|XP_009600118.1| | 5e-82 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 694 | 005424 (9) | gb|KEH16707.1| | 5e-102 | glycoside hydrolase family 1 protein [Medicago truncatula] |
| JMFF027G19 | Sequence | 538 | 003515 (9) | ref|XP_009600118.1| | 3e-86 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 689 | 005424 (9) | gb|KEH16707.1| | 3e-107 | glycoside hydrolase family 1 protein [Medicago truncatula] |
| JMSF002O03 | Sequence | 340 | 003515 (9) | ref|XP_009799689.1| | 2e-33 | PREDICTED: beta-glucosidase 44-like [Nicotiana sylvestris] | 703 | 005424 (9) | gb|KEH16707.1| | 2e-111 | glycoside hydrolase family 1 protein [Medicago truncatula] |
| JMSF022B10 | Sequence | 629 | 003515 (9) | ref|XP_009600118.1| | 7e-103 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 789 | 005424 (9) | gb|KEH16707.1| | 3e-135 | glycoside hydrolase family 1 protein [Medicago truncatula] |
| JMSF030C24 | Sequence | 653 | 003515 (9) | ref|XP_009600118.1| | 3e-109 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 627 | 005424 (9) | gb|KEH16707.1| | 1e-94 | glycoside hydrolase family 1 protein [Medicago truncatula] |
| JMSF038F09 | Sequence | 682 | 003515 (9) | ref|XP_009600118.1| | 5e-116 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 875 | 005424 (9) | ref|XP_006490742.1| | 1e-141 | PREDICTED: beta-glucosidase 44-like [Citrus sinensis] |
| JMSF041J09 | Sequence | 789 | 003515 (9) | ref|XP_009600118.1| | 2e-143 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 822 | 005424 (9) | gb|KEH16707.1| | 3e-141 | glycoside hydrolase family 1 protein [Medicago truncatula] |
| JMSF046K12 | Sequence | 750 | 003515 (9) | ref|XP_009600118.1| | 7e-135 | PREDICTED: beta-glucosidase 44-like [Nicotiana tomentosiformis] | 748 | 005424 (9) | gb|KEH16707.1| | 2e-112 | glycoside hydrolase family 1 protein [Medicago truncatula] |
This contig is upended
. : . : . : . : . : . :
rJMSF038F09+ CCAC
____________________________________________________________
consensus CCAC
. : . : . : . : . : . :
rJMSF041J09+ GGGAAGATTTGGG
rJMSF038F09+ GGGGCAGCTGCTCAGAGATATCGCGCTAAGTATCAGGCTAAGCAGAAGGGAAGATTTGGG
____________________________________________________________
consensus GGGGCAGCTGCTCAGAGATATCGCGCTAAGTATCAGGCTAAGCAGAAGGGAAGATTTGGG
. : . : . : . : . : . :
rJMSF041J09+ ATTTTCCTGGATTTTGTGTGGTATGAACCCCTGACAAGATCAAAGGCTGACAATTATGCT
rJMSF022B10+ GTGGTATGAACCCCTGACAAGATCAAAGGCTGACAATTATGCT
rJMSF038F09+ ATTCTCCTGGATTTTGTGTGGTATGAACCCCTGACAAGATCAAAGGCTGACAATTATGCT
____________________________________________________________
consensus ATTTTCCTGGATTTTGTGTGGTATGAACCCCTGACAAGATCAAAGGCTGACAATTATGCT
. : . : . : . : . : . :
rJMSF046K12+ TCAGAGGGCTAGAGACTTTCATTTTGGGCTGGTTTTTGCATCCCCATTGTGTATGGGG
rJMSF041J09+ GCTCAGAGGGCTAGAGACTTTCA-TTTGGGCTGGTTTTTGCAT-CCCATTGTGTATGGGG
rJMSF022B10+ GCTCAGAGGGCTAGAGACTTTCA-TTTGGGCTGGTTTTTGCAT-CCCATTGTGTATGGGG
rJMSF002O03+ ATTGTGTATGGGG
rJMSF038F09+ GCTCAGAGGGCTAGAGACTTTCA-TTTGGGCTGGTTTTTGCAT-CCCATTGTGTATGGGG
____________________________________________________________
consensus GCTCAGAGGGCTAGAGACTTTCA-TTTGGGCTGGTTTTTGCAT-CCCATTGTGTATGGGG
. : . : . : . : . : . :
rJMSF046K12+ AATACCCAAAAACCATGCAAAACATCGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
rJMSF041J09+ AATACCCAAAAACCATGCAAAACATCGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
rJMSF022B10+ AATACCCAAAAACCATGCAAAACATCGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
rJMFF027G19+ AATACCCAAAANCCATGCAAAACATCGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
rJMSF002O03+ AATACCCAAAAACCATGCAAAACATCGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
rJMSF038F09+ AATACCCAAAAACCATGCAAAACATCGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
rJMFF005O09+ CGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
rJMFF025E19+ CGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
____________________________________________________________
consensus AATACCCAAAAACCATGCAAAACATCGTAGGCAAAAGGCTCCCCAAGTTCACCCCCGACG
. : . : . : . : . : . :
rJMSF046K12+ AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
rJMSF041J09+ AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
rJMSF022B10+ AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
rJMFF027G19+ AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
rJMSF002O03+ AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
rJMSF038F09+ AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
rJMFF005O09+ AGGTTAAGATGGTTAAAGGATCAATNGATTACGTTGGCATAANCCAATACACANCTTNCT
rJMSF030C24+ TAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
rJMFF025E19+ AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
____________________________________________________________
consensus AGGTTAAGATGGTTAAAGGATCAATCGATTACGTTGGCATAAACCAATACACAACTTACT
. : . : . : . : . : . :
rJMSF046K12+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMSF041J09+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMSF022B10+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMFF027G19+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMSF002O03+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMSF038F09+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMFF005O09+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMSF030C24+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
rJMFF025E19+ ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
____________________________________________________________
consensus ATATGTACGAGCCACATAACAACAAGCCACCAGTCCCCGGCTACCAGAACGACTGGAACG
. : . : . : . : . : . :
rJMSF046K12+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMSF041J09+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMSF022B10+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMFF027G19+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMSF002O03+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMSF038F09+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMFF005O09+ TCGGGTTTGCNTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMSF030C24+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
rJMFF025E19+ TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
____________________________________________________________
consensus TCGGGTTTGCCTATGAAAAAAACGGAGTGCCAATTGGTCCAAGGGCACATTCATATTGGC
. : . : . : . : . : . :
rJMSF046K12+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMSF041J09+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMSF022B10+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMFF027G19+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMSF002O03+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMSF038F09+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMFF005O09+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMSF030C24+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
rJMFF025E19+ TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
____________________________________________________________
consensus TCTATATGGTGCCCTGGGGAATGTACAAGGCTGTGAGCTATGTGAAGGAGCGTTATGGAA
. : . : . : . : . : . :
rJMSF046K12+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMSF041J09+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMSF022B10+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMFF027G19+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMSF002O03+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMSF038F09+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMFF005O09+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMSF030C24+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
rJMFF025E19+ ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
____________________________________________________________
consensus ATCCCACTATGATTTTATCAGAAAACGGGATGGACTATGCAGGCAATCTAACCTTTGCTG
. : . : . : . : . : . :
rJMSF046K12+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMSF041J09+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMSF022B10+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMFF027G19+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMSF002O03+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMSF038F09+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMFF005O09+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMSF030C24+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
rJMFF025E19+ AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
____________________________________________________________
consensus AATCCTATCATGACACAAAAAGGATCAACTATTACAAGAGTTACCTGATTCAACTGAAGA
. : . : . : . : . : . :
rJMSF046K12+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAATT
rJMSF041J09+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
rJMSF022B10+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
rJMFF027G19+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
rJMSF002O03+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
rJMSF038F09+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
rJMFF005O09+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
rJMSF030C24+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
rJMFF025E19+ AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
____________________________________________________________
consensus AGGCAATCGACGACGGGGCCAATGTGATAGGCTACCACGCATGGTCATTGCTCGACAACT
. : . : . : . : . : . :
rJMSF046K12+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMSF041J09+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMSF022B10+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMFF027G19+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMSF002O03+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMSF038F09+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMFF005O09+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMSF030C24+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
rJMFF025E19+ TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
____________________________________________________________
consensus TCGAGTGGAGGCTAGGCTACACTTCGAGATTTGGCCTCGTGTATGTCGATTACAAGACCC
. : . : . : . : . : . :
rJMSF046K12+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMSF041J09+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMSF022B10+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMFF027G19+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMSF002O03+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMSF038F09+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMFF005O09+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMSF030C24+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
rJMFF025E19+ TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
____________________________________________________________
consensus TCAAGAGGGCTCCAAAGGAGTCGGCCAAATGGTTCCAATATATGATTCGTCGAAACAAGC
. : . : . : . : . : . :
rJMSF046K12+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
rJMSF041J09+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
rJMSF022B10+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAG-TTGTCTCGACTTTCTTGGTTAG-AACT
rJMFF027G19+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
rJMSF002O03+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
rJMSF038F09+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
rJMFF005O09+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
rJMSF030C24+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAGAAACT
rJMFF025E19+ ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
____________________________________________________________
consensus ATTAAGCTTCCCTCCACCGCATCGTCTTTTAGTTTGTCTCGACTTTCTTGGTTAG-AACT
. : . : . : . : . : . :
rJMSF046K12+ GCATAAGCCCTGTAACAGCAACTTCTGGA
rJMSF041J09+ GCATAAGCCCTGTAACAGCAACTTCTGGA
rJMSF022B10+ GCATAAGCCCTGTAACAGCAACTTCTGGAC
rJMFF027G19+ GCATAAGCCCTGTAACAGCAACTTCTGGAC
rJMSF002O03+ GCATAAGCCCTGTAACAGCAACTTCTGGACC
rJMSF038F09+ GCATAAGCCCTGTAACAGCAACTTCTGGACC
rJMFF005O09+ GCATAAGCCCTGTAACAGCAACTTCTGGACC
rJMSF030C24+ GCATAAGCCCTGTAACAGCAACTTCTGGACC
rJMFF025E19+ GCATAAGCCCTGTAACAGCAACTTCTGGACCTTGTGGTCCTTGTGGTTTTAATAAAAGCT
____________________________________________________________
consensus GCATAAGCCCTGTAACAGCAACTTCTGGACCTTGTGGTCCTTGTGGTTTTAATAAAAGCT