Contig 005416:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016F21Sequence562012078 (4)ref|XP_006340682.1|7e-77PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum]673005416 (4)emb|CDP01951.1|2e-26unnamed protein product [Coffea canephora]
JMFF023H23Sequence491012078 (4)ref|XP_006340682.1|4e-53PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum]783005416 (4)emb|CDP01951.1|4e-48unnamed protein product [Coffea canephora]
JMFN011F05Sequence485005416 (4)gb|EYU31162.1|5e-63hypothetical protein MIMGU_mgv11b006051mg [Erythranthe guttata]
JMSF032J23Sequence671012078 (4)ref|XP_006340682.1|4e-51PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum]727005416 (4)emb|CDP01951.1|2e-50unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN011F05-                                             CACTGTGGAAACAACGATTGGCTTCA
                      ____________________________________________________________
consensus                                               CACTGTGGAAACAACGATTGGCTTCA
 
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JMFN011F05-           TTCAAGAAGCACCGGCCCTTGGAGTTTCTGGATTCAATATCTATCACAAAAATCGTCTAA
rJMSF032J23+                                                          AAAATCGTCTNA
rJMFF023H23+                                                                     A
                      ____________________________________________________________
consensus             TTCAAGAAGCACCGGCCCTTGGAGTTTCTGGATTCAATATCTATCACAAAAATCGTCTAA
 
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JMFN011F05-           TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
rJMSF032J23+          TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
rJMFF023H23+          TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
                      ____________________________________________________________
consensus             TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
 
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JMFN011F05-           TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
rJMSF032J23+          TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
rJMFF016F21+                                   TGCACATGACAAACAGGATTTTGAGAGATCTACGA
rJMFF023H23+          TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
                      ____________________________________________________________
consensus             TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
 
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JMFN011F05-           GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
rJMSF032J23+          GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
rJMFF016F21+          GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
rJMFF023H23+          GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
                      ____________________________________________________________
consensus             GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
 
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JMFN011F05-           GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
rJMSF032J23+          GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
rJMFF016F21+          GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
rJMFF023H23+          GTCACCTGATAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
                      ____________________________________________________________
consensus             GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
 
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JMFN011F05-           CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
rJMSF032J23+          CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
rJMFF016F21+          CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
rJMFF023H23+          CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
                      ____________________________________________________________
consensus             CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
 
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JMFN011F05-           CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
rJMSF032J23+          CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
rJMFF016F21+          CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
rJMFF023H23+          CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
                      ____________________________________________________________
consensus             CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
 
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JMFN011F05-           TGAAATGCGAGGAGTATATACAGAAGGAAAAT                            
rJMSF032J23+          TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
rJMFF016F21+          TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
rJMFF023H23+          TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
                      ____________________________________________________________
consensus             TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
 
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rJMSF032J23+          AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
rJMFF016F21+          AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
rJMFF023H23+          AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
                      ____________________________________________________________
consensus             AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
 
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rJMSF032J23+          GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
rJMFF016F21+          GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
rJMFF023H23+          GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
                      ____________________________________________________________
consensus             GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
 
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rJMSF032J23+          CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
rJMFF016F21+          CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
rJMFF023H23+          CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
                      ____________________________________________________________
consensus             CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
 
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rJMSF032J23+          TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
rJMFF016F21+          TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
rJMFF023H23+          TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
                      ____________________________________________________________
consensus             TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
 
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rJMSF032J23+          CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCT                       
rJMFF016F21+          CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCTTGGAATGGCTTGCTTCTGGAAAT
rJMFF023H23+          CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCTTGGAATGGCTTGCTTCTGGAAAT
                      ____________________________________________________________
consensus             CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCTTGGAATGGCTTGCTTCTGGAAAT
 
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rJMFF016F21+          GTTATTTGCAGAATAGAAAATTGAATGATATGGCAGAA                      
rJMFF023H23+          GTTATTTGCAGAATAGAAAATTGAATGATATGGCAGAATAGGTTTATTTTTAAAAAAAAT
                      ____________________________________________________________
consensus             GTTATTTGCAGAATAGAAAATTGAATGATATGGCAGAATAGGTTTATTTTTAAAAAAAAT