Contig 005416:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016F21Sequence562012078 (4)ref|XP_006340682.1|7e-77PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum]673005416 (4)emb|CDP01951.1|2e-26unnamed protein product [Coffea canephora]
JMFF023H23Sequence491012078 (4)ref|XP_006340682.1|4e-53PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum]783005416 (4)emb|CDP01951.1|4e-48unnamed protein product [Coffea canephora]
JMFN011F05Sequence485005416 (4)gb|EYU31162.1|5e-63hypothetical protein MIMGU_mgv11b006051mg [Erythranthe guttata]
JMSF032J23Sequence671012078 (4)ref|XP_006340682.1|4e-51PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum tuberosum]727005416 (4)emb|CDP01951.1|2e-50unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN011F05- CACTGTGGAAACAACGATTGGCTTCA
                      ____________________________________________________________
consensus CACTGTGGAAACAACGATTGGCTTCA
 
. : . : . : . : . : . :
JMFN011F05- TTCAAGAAGCACCGGCCCTTGGAGTTTCTGGATTCAATATCTATCACAAAAATCGTCTAA
rJMSF032J23+ AAAATCGTCTNA
rJMFF023H23+ A
                      ____________________________________________________________
consensus TTCAAGAAGCACCGGCCCTTGGAGTTTCTGGATTCAATATCTATCACAAAAATCGTCTAA
 
. : . : . : . : . : . :
JMFN011F05- TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
rJMSF032J23+ TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
rJMFF023H23+ TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
                      ____________________________________________________________
consensus TCAGGCCGTATTGGAAAGTCACTGCAGATGGTTCTTCAAGAGGAAATGGTGTTGTTGGAG
 
. : . : . : . : . : . :
JMFN011F05- TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
rJMSF032J23+ TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
rJMFF016F21+ TGCACATGACAAACAGGATTTTGAGAGATCTACGA
rJMFF023H23+ TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
                      ____________________________________________________________
consensus TGTTGGAAGCAAATTTTATAGAACCTGCACATGACAAACAGGATTTTGAGAGATCTACGA
 
. : . : . : . : . : . :
JMFN011F05- GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
rJMSF032J23+ GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
rJMFF016F21+ GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
rJMFF023H23+ GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
                      ____________________________________________________________
consensus GTTTTTACAGATTGGAGATGAGGCTAAAGCAAATGATAATGGAATACTGGAAAGTTTGTT
 
. : . : . : . : . : . :
JMFN011F05- GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
rJMSF032J23+ GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
rJMFF016F21+ GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
rJMFF023H23+ GTCACCTGATAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
                      ____________________________________________________________
consensus GTCACCTGGTAGGACACAGACCCCCAGGTAGAAGTGTGCCGGGAGAAGCTACTGCCCAAC
 
. : . : . : . : . : . :
JMFN011F05- CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
rJMSF032J23+ CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
rJMFF016F21+ CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
rJMFF023H23+ CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
                      ____________________________________________________________
consensus CACAAGTTAAAGTTGTCAATACACAAATGCCGTTGCCAACTGCTGAACGTCAGCCAGTCA
 
. : . : . : . : . : . :
JMFN011F05- CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
rJMSF032J23+ CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
rJMFF016F21+ CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
rJMFF023H23+ CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
                      ____________________________________________________________
consensus CCAGTCTTGTGGATGAAAGATCGATCGATCAGATATCCGAAGAGAACATCCAGCTCTTTA
 
. : . : . : . : . : . :
JMFN011F05- TGAAATGCGAGGAGTATATACAGAAGGAAAAT
rJMSF032J23+ TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
rJMFF016F21+ TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
rJMFF023H23+ TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
                      ____________________________________________________________
consensus TGAAATGCGAGGAGTATATACAGAAGGAAAATGAATTGAAGAAAATGATCGGGGAAATGG
 
. : . : . : . : . : . :
rJMSF032J23+ AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
rJMFF016F21+ AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
rJMFF023H23+ AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
                      ____________________________________________________________
consensus AGACAGAGCTGGAGGAAACTAAAAAGAAATGTGCTGTTATTTCTTCACGCCTGGAAACAC
 
. : . : . : . : . : . :
rJMSF032J23+ GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
rJMFF016F21+ GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
rJMFF023H23+ GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
                      ____________________________________________________________
consensus GGAAGAAGTTAAAGGCTATGAGTGAAGTGCAAAATGTTAAATGAAGCTACTTTCTGATTA
 
. : . : . : . : . : . :
rJMSF032J23+ CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
rJMFF016F21+ CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
rJMFF023H23+ CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
                      ____________________________________________________________
consensus CTGATGAATGTATATGATATAGTTATACGGTGATGGATTTGCTTGCAGGCTTGACAGCAT
 
. : . : . : . : . : . :
rJMSF032J23+ TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
rJMFF016F21+ TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
rJMFF023H23+ TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
                      ____________________________________________________________
consensus TCTGCCTTTCATGTTTTTGTTTGCATCTTAGAGGAGTGTAAATTAACGAATTAAAATCCT
 
. : . : . : . : . : . :
rJMSF032J23+ CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCT
rJMFF016F21+ CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCTTGGAATGGCTTGCTTCTGGAAAT
rJMFF023H23+ CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCTTGGAATGGCTTGCTTCTGGAAAT
                      ____________________________________________________________
consensus CATGACTATAACTGAATTATGAGCCCCCCTTGCCCCTTGGAATGGCTTGCTTCTGGAAAT
 
. : . : . : . : . : . :
rJMFF016F21+ GTTATTTGCAGAATAGAAAATTGAATGATATGGCAGAA
rJMFF023H23+ GTTATTTGCAGAATAGAAAATTGAATGATATGGCAGAATAGGTTTATTTTTAAAAAAAAT
                      ____________________________________________________________
consensus GTTATTTGCAGAATAGAAAATTGAATGATATGGCAGAATAGGTTTATTTTTAAAAAAAAT