| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004K13 | Sequence | 516 | 001566 (4) | ref|XP_011081220.1| | 2e-44 | PREDICTED: protein NRT1/ PTR FAMILY 6.3-like [Sesamum indicum] | 750 | 005407 (5) | ref|XP_009613364.1| | 7e-83 | PREDICTED: protein NRT1/ PTR FAMILY 6.3-like [Nicotiana tomentosiformis] |
| JMFF021L07 | Sequence | 541 | 001566 (4) | ref|XP_004244572.1| | 8e-59 | PREDICTED: protein NRT1/ PTR FAMILY 6.3-like [Solanum lycopersicum] | 680 | 005407 (5) | ref|XP_011463731.1| | 7e-74 | PREDICTED: protein NRT1/ PTR FAMILY 6.3 isoform X2 [Fragaria vesca subsp. vesca |
| JMSF024N15 | Sequence | 700 | 005407 (5) | gb|EYU18566.1| | 9e-124 | hypothetical protein MIMGU_mgv1a020825mg [Erythranthe guttata] | 732 | 005407 (5) | ref|XP_004245746.1| | 5e-87 | PREDICTED: protein NRT1/ PTR FAMILY 6.3-like [Solanum lycopersicum] |
| JMSF025I16 | Sequence | 641 | 001566 (4) | ref|XP_006358355.1| | 6e-77 | PREDICTED: nitrate transporter 1.1-like [Solanum tuberosum] | 746 | 005407 (5) | ref|XP_004245746.1| | 3e-90 | PREDICTED: protein NRT1/ PTR FAMILY 6.3-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF024N15- GGATCAGAATGTTACCCACGT
____________________________________________________________
consensus GGATCAGAATGTTACCCACGT
. : . : . : . : . : . :
JMSF024N15- GGGCAACGACCATAATGTTCTGGACCGTCTACGCTCAAATGACGACGTTTTCCGTGTCGC
____________________________________________________________
consensus GGGCAACGACCATAATGTTCTGGACCGTCTACGCTCAAATGACGACGTTTTCCGTGTCGC
. : . : . : . : . : . :
JMSF024N15- AAGCCACCACCATGGACCGCCGCATCGGCAAGTCGTTCGAGATCCCAGCGGCGTCGTTGA
____________________________________________________________
consensus AAGCCACCACCATGGACCGCCGCATCGGCAAGTCGTTCGAGATCCCAGCGGCGTCGTTGA
. : . : . : . : . : . :
JMSF024N15- CCGTCTTCTTCGTGGGGAGCATCCTTCTCACCGTCGCGTTTTACGACCGCGCCGTC-GTG
rJMSF025I16+ GGGGAGCATCCTTCTCACCGTCGCGTTTTACGACCGCGCCGTC-GTG
rJMSF024N15+ ACCGTCGCGTTTTACGACCGCGCCGTC-GTG
rJMFF004K13+ ACCGTCGCGTTTTACGACCGCGCCGTCGGTG
____________________________________________________________
consensus CCGTCTTCTTCGTGGGGAGCATCCTTCTCACCGTCGCGTTTTACGACCGCGCCGTC-GTG
. : . : . : . : . : . :
JMSF024N15- CCCGTTTGCCGGCGAGTCCTGAACAACCCGCAGGGGCTATCTCCGCTGCAGAGAATCGGC
rJMSF025I16+ CCCGTTTGCCGGCGAGTCCTGAACAACCCGCAGGGGCTATCTCCGCTGCAGAGAATCGGC
rJMSF024N15+ CCCGTTTGCCGGCGAGTCCTGAACAACCCGCAGGGGCTATCTCCGCTGCAGAGAATCGGC
rJMFF004K13+ CCCGTTTGCCGGCGAGTCCTGAACAACCCGCAGGGGCTATCTCCGCTGCAGAGAATCGGC
rJMFF021L07+ CTCCGCTGCAGAGAATCGGC
____________________________________________________________
consensus CCCGTTTGCCGGCGAGTCCTGAACAACCCGCAGGGGCTATCTCCGCTGCAGAGAATCGGC
. : . : . : . : . : . :
JMSF024N15- GTGGGTCTGGTGTTCTCCATCTTCGCCATGATCGCCGCCGCCTTGACCGAAATCAAGCGG
rJMSF025I16+ GTGGGTCTGGTGTTCTCCATCTTCGCCATGATCGCCGCCGCCTTGACCGAAATCAAGCGG
rJMSF024N15+ GTGGGTCTGGTGTTCTCCATCTTCGCCATGATCGCCGCCGCCTTGACCGAAATCAAGCGG
rJMFF004K13+ GTGGGTCTGGTGTTCTCCATCTTCGCCATGATCGCCGCCGCCTTGACCGAAATCAAGCGG
rJMFF021L07+ GTGGGTCTGGTGTTCTCCATCTTCGCCATGATCGCCGCCGCCTTGACCGAAATCAAGCGG
____________________________________________________________
consensus GTGGGTCTGGTGTTCTCCATCTTCGCCATGATCGCCGCCGCCTTGACCGAAATCAAGCGG
. : . : . : . : . : . :
JMSF024N15- CTAAAGGTGGCCCAATCGCACGGGCTAACAAACGACCCAAACGCCACCATTCCCCAAAGC
rJMSF025I16+ CTAAAGGTGGCCCAATCGCACGGGCTAACAAACGACCCAAACGCCACCATTCCCCAAAGC
rJMSF024N15+ CTAAAGGTGGCCCAATCGCACGGGCTAACAAACGACCCAAACGCCACCATTCCCCAAAGC
rJMFF004K13+ CTAAAGGTGGCCCAATCGCACGGGCTAACAAACGACCCAAACGCCACCATTCCCCAAAGC
rJMFF021L07+ CTAAAGGTGGCCCAATCGCACGGGCTAACAAACGACCCAAACGCCACCATTCCCCAAAGC
____________________________________________________________
consensus CTAAAGGTGGCCCAATCGCACGGGCTAACAAACGACCCAAACGCCACCATTCCCCAAAGC
. : . : . : . : . : . :
JMSF024N15- GTATTCTGGCTAGTCCCGCAGTTCTTCTTAGTGGGCGCCGGAGAGGCCTTCACTTACATC
rJMSF025I16+ GTATTCTGGCTAGTCCCGCAGTTCTTCTTAGTGGGCGCCGGAGAGGCCTTCACTTACATC
rJMSF024N15+ GTATTCTGGCTAGTCCCGCAGTTCTTCTTAGTGGGCGCCGGAGAGGCCTTCACTTACATC
rJMFF004K13+ GTATTCTGGCTAGTCCCGCAGTTCTTCTTAGTGGGCGCCGGAGAGGCCTTCACTTACATC
rJMFF021L07+ GTATTCTGGCTAGTCCCGCAGTTCTTCTTAGTGGGCGCCGGAGAGGCCTTCACTTACATC
____________________________________________________________
consensus GTATTCTGGCTAGTCCCGCAGTTCTTCTTAGTGGGCGCCGGAGAGGCCTTCACTTACATC
. : . : . : . : . : . :
JMSF024N15- GGACAACTCGATTTCTTCCTTCGAGAATGCCCGAAAGGGATGAAAACCATGAGCGCAGGC
rJMSF025I16+ GGACAACTCGATTTCTTCCTGCGAGAATGCCCGAAAGGGATGAAAACCATGAGCGCAGGC
rJMSF024N15+ GGACAACTCGATTTCTTCCTTCGAGAATGCCCGAAAGGGATGAAAACCATGAGCGCAGGC
rJMFF004K13+ GGACAACTCGATTTCTTCCTGCGAGAATGCCCGAAAGGGATGAAAACCATGAGCGCAGGC
rJMFF021L07+ GGACAACTCGATTTCTTCCTGCGAGAATGCCCGAAAGGGATGAAAACCATGAGCGCAGGC
____________________________________________________________
consensus GGACAACTCGATTTCTTCCTTCGAGAATGCCCGAAAGGGATGAAAACCATGAGCGCAGGC
. : . : . : . : . : . :
JMSF024N15- CTGTTTCTAAGCACGCTCTCGCTGGGGTTCTTCTTTAGCTCAACCCTGGTCACCATTGTT
rJMSF025I16+ CTGTTTCTAAGCACGCTCTCGCTGGGGTTCTTCTTTAGCTCAACCCTGGTCACCATTGTT
rJMSF024N15+ CTGTTTCTAAGCACGCTCTCGCTGGGGTTCTTCTTTAGCTCAACCCTGGTCACCATTGTT
rJMFF004K13+ CTGTTTCTAAGCACGCTCTCGCTGGGGTTCTTCTTTAGCTCAACCCTGGTCACCATTGTT
rJMFF021L07+ CTGTTTCTAAGCACGCTCTCGCTGGGGTTCTTCTTTAGCTCAACCCTGGTCACCATTGTT
____________________________________________________________
consensus CTGTTTCTAAGCACGCTCTCGCTGGGGTTCTTCTTTAGCTCAACCCTGGTCACCATTGTT
. : . : . : . : . : . :
JMSF024N15- CACAAGGTGACGGGGGAGAAAACGCCATGGCTGGCGGATAATCTGAACCGAGGAAGGCTC
rJMSF025I16+ CACAAGGTGACGGGGGAGAAAACGCCATGGCTGGCGGATAATCTGAACCGAGGAAGGCTC
rJMSF024N15+ CACAAGGTGACGGGGGAGAAAACGCCATGGCTGGCGGATAATCTGAACCGAGGAAGGCTC
rJMFF004K13+ CACAAGGTGACGGGGGAGAAAACGCCATGGCTGGCGGATAATCTGAACCGAGGAAGGCTC
rJMFF021L07+ CACAAGGTGACGGGGGAGAAAACGCCATGGCTGGCGGATAATCTGAACCGAGGAAGGCTC
____________________________________________________________
consensus CACAAGGTGACGGGGGAGAAAACGCCATGGCTGGCGGATAATCTGAACCGAGGAAGGCTC
. : . : . : . : . : . :
JMSF024N15- TATGATTTCTACTGGCTGCTAGCGATTCTGAGTGTTATTAATTTGATGCTTTTCTTGTTC
rJMSF025I16+ TATGATTTCTACTGGCTGCTAGCGATTCTGAGTGTTATTAATTTGATGCTTTTCTTGTTC
rJMSF024N15+ TATGATTTCTACTGGCTGCTAGCGATTCTGAGTGTTATTAATTTGATGCTTTTCTTGTTC
rJMFF004K13+ TATGATTTCTACTGGCTGCTAGCGATTCTGAGTGTTATTAATTTGATGCTTTTCTTGTTC
rJMFF021L07+ TATGATTTCTACTGGCTGCTAGCGATTCTGAGTGTTATTAATTTGATGCTTTTCTTGTTC
____________________________________________________________
consensus TATGATTTCTACTGGCTGCTAGCGATTCTGAGTGTTATTAATTTGATGCTTTTCTTGTTC
. : . : . : . : . : . :
JMSF024N15- TGCTCGAGATGGTATGT
rJMSF025I16+ TGCTCGAGATGGTATGTGTACAAGGAGAAGAGGCTTGCGGATGAGGGGATTGAGTTAGAG
rJMSF024N15+ TGCTCGAGATGGTATGTGTACAAGGAGAAGAGGCTTGCGGATGAGGGGATTGAGTTAGAG
rJMFF004K13+ TGCTCGAGATGGTATGTATACAAGGAGAAGAGGCTTGCGGATGAGGGGATTGAGTTAGAG
rJMFF021L07+ TGCTCGAGATGGTATGTATACAAGGAGAAGAGGCTTGCGGATGAGGGGATTGAGTTAGAG
____________________________________________________________
consensus TGCTCGAGATGGTATGTGTACAAGGAGAAGAGGCTTGCGGATGAGGGGATTGAGTTAGAG
. : . : . : . : . : . :
rJMSF025I16+ GAGGACGAAGAATCTGCAGCGGCATGCCATTAACACAAGACGACTGGGCCTGCGGGCCGT
rJMSF024N15+ GAGGACGAAGAATCTGCAGCGGCATGCCATTAACACAAGACGACTGGGCCTGCGGGCCGT
rJMFF004K13+ GAGGACGAAGAATCTGCAGCGGCATGCCATTAACACAAGACGACTGGGCCTGCGGGCCGT
rJMFF021L07+ GAGGACGAAGAATCTGCAGCGGCATGCCATTAACACAAGACGACTGGGCCTGCGGGCCGT
____________________________________________________________
consensus GAGGACGAAGAATCTGCAGCGGCATGCCATTAACACAAGACGACTGGGCCTGCGGGCCGT
. : . : . : . : . : . :
rJMSF025I16+ CCATTCATCAAGAACACAACTATGTTCGCTTCTTTGTTCCTTAATTTGAAAGGTTTAAAA
rJMSF024N15+ CCATTCATCAAGAACACAACTATGTTCGCTTCTTTGTTCCTTAATTTGAAAGGTTTAAAA
rJMFF004K13+ CCATTCATCAAGAACACAACTATGTTCGCTTCTTTGTTCCTTAATTTGAAAGGTTTAAAA
rJMFF021L07+ CCATTCATCAAGAACACAACTATGTTCGCTTCTTTGTTCCTTAATTTGAAAGGTTTAAAA
____________________________________________________________
consensus CCATTCATCAAGAACACAACTATGTTCGCTTCTTTGTTCCTTAATTTGAAAGGTTTAAAA
. : . : . : . : . : . :
rJMSF025I16+ TAATTACATTTTGTAAGCTTGTTAGTTATCATATGTATGT
rJMSF024N15+ TAATTACATTTTGTAAGCTTGTTAGTTATCATATGTATGT
rJMFF004K13+ TAATTACATTTTGTAAGCTTGTTAGTTATCATATGTATGTGTACATAAAAAGAAATGCA
rJMFF021L07+ TAATTACATTTTGTAAGCTTGTTAGTTATCATATGTATGTGTACATAAAAAGAAATGCAT
____________________________________________________________
consensus TAATTACATTTTGTAAGCTTGTTAGTTATCATATGTATGTGTACATAAAAAGAAATGCAT