Contig 005406:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002O11Sequence754005406 (3)emb|CDP05735.1|2e-70unnamed protein product [Coffea canephora]
JMFF021G24Sequence486004538 (3)ref|XP_011095407.1|2e-25PREDICTED: probable beta-1,3-galactosyltransferase 2 [Sesamum indicum]671005406 (3)emb|CDP05735.1|1e-49unnamed protein product [Coffea canephora]
JMSF034P16Sequence646004538 (3)ref|XP_011095407.1|2e-70PREDICTED: probable beta-1,3-galactosyltransferase 2 [Sesamum indicum]775005406 (3)emb|CDP05735.1|1e-82unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF034P16+                                                       AAGGGAGTAAGATAT
                      ____________________________________________________________
consensus                                                          AAGGGAGTAAGATAT
 
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rJMSF034P16+          CATGAGCCCGAACACTGGAAATTTGGTGAGGAAGGAAATAAGTACTTCCGCCATGCGACT
rJMFF002O11+                                   GTGAGGAAGGAAATAAGTACTTCCGCCATGCGACT
                      ____________________________________________________________
consensus             CATGAGCCCGAACACTGGAAATTTGGTGAGGAAGGAAATAAGTACTTCCGCCATGCGACT
 
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rJMSF034P16+          GGGCAGCTATATGCCATTTCAAAAGATTTAGCAACCTATATTTCCATAAACCAGAACATG
rJMFF002O11+          GGGCAGCTATATGCCATTTCAAAAGATTTAGCAACCTATATTTCCATAAACCAGAACATG
rJMFF021G24+                                                           ACCAGAACATG
                      ____________________________________________________________
consensus             GGGCAGCTATATGCCATTTCAAAAGATTTAGCAACCTATATTTCCATAAACCAGAACATG
 
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rJMSF034P16+          CTTCACAAATATACTAACGAGGACGTCTCTCTGGGATCATGGTTAATCGGATTGGATGTA
rJMFF002O11+          CTTCACAAATATACTAACGAGGACGTCTCTCTGGGATCATGGTTAATCGGATTGGATGTA
rJMFF021G24+          CTTCACAAATATACTAACGAGGACGTCTCTCTGGGATCATGGTTAATCGGATTGGATGTA
                      ____________________________________________________________
consensus             CTTCACAAATATACTAACGAGGACGTCTCTCTGGGATCATGGTTAATCGGATTGGATGTA
 
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rJMSF034P16+          GAACATATAGATGACCGAAGGCTGTGCTGTGGAACTCCACCCGACTGTGAATGGAAGGCT
rJMFF002O11+          GAACATATAGATGACCGAAGGCTGTGCTGTGGAACTCCACCCGACTGTGAATGGAAGGCT
rJMFF021G24+          GAACATATAGATGACCGAAGGCTGTGCTGTGGAACTCCACCCGACTGTGAATGGAAGGCT
                      ____________________________________________________________
consensus             GAACATATAGATGACCGAAGGCTGTGCTGTGGAACTCCACCCGACTGTGAATGGAAGGCT
 
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rJMSF034P16+          CAAGCGGGGAACGTATGCGTGGCTTCCTTTGATTGGCGATGCAGTGGCATTTGCAATTCG
rJMFF002O11+          CAAGCGGGGAACGTATGCGTGGCTTCCTTTGATTGGCGATGCAGTGGCATTTGCAATTCG
rJMFF021G24+          CAAGCGGGGAACGTATGCGTGGCTTCCTTTGATTGGCGATGCAGTGGCATTTGCAATTCG
                      ____________________________________________________________
consensus             CAAGCGGGGAACGTATGCGTGGCTTCCTTTGATTGGCGATGCAGTGGCATTTGCAATTCG
 
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rJMSF034P16+          GTGGAGAGAATCAAGGAGGTTCACCGTCGGTGTGGGGAAGGCGATAACGCCCTTTGGAAT
rJMFF002O11+          GTGGAGAGAATCAAGGAGGTTCACCGTCGGTGTGGGGAAGGCGATAACGCCCTTTGGAAT
rJMFF021G24+          GTGGAGAGAATCAAGGAGGTTCACCGTCGGTGTGGGGAGGGCGATAACGCCCTTTGGAAT
                      ____________________________________________________________
consensus             GTGGAGAGAATCAAGGAGGTTCACCGTCGGTGTGGGGAAGGCGATAACGCCCTTTGGAAT
 
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rJMSF034P16+          GCAGTGTTTTGATAATGCGGATCCTCCAAGCTCTGGAGGCGTTGGAACTGATATCAAGAG
rJMFF002O11+          GCAGTGTTTTGATAATGCGGATCCTCCAAGCTCTGGAGGCGTTGGAACTGATATCAAGAG
rJMFF021G24+          GCAGTGTTTTGATAATGCGGATCCTCCAAGCTCTGGAGGCGTTGGAACTGATATCAAGAG
                      ____________________________________________________________
consensus             GCAGTGTTTTGATAATGCGGATCCTCCAAGCTCTGGAGGCGTTGGAACTGATATCAAGAG
 
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rJMSF034P16+          TACAGTGTAATGGCCATTTGTTTCGGGGAATTTTTCTGAATTATCAACCTGTAAAATACG
rJMFF002O11+          TACAGTGTAATGGCCATTTGTTTCGGGGAATTTTTCTGAATTATCAACCTGTAAAATACG
rJMFF021G24+          TACAGTGTAATGGCCATTTGTTTCGGGGAATTTTTCTGAATTATCAACCTGTAAAATACG
                      ____________________________________________________________
consensus             TACAGTGTAATGGCCATTTGTTTCGGGGAATTTTTCTGAATTATCAACCTGTAAAATACG
 
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rJMSF034P16+          CGTCGAAAGAAGCAGTGAGACAGAGAGGTTGCTGTGGGAATCTACTCCATTTTAGGTAAG
rJMFF002O11+          CGTCGAAAGAAGCAGTGAGACAGAGAGGTTGCTGTGGGAATCTACTCCATTTTAGGTAAG
rJMFF021G24+          CGTCGAAAGAAGCAGTGAGACAGAGAGGTTGCTGTGGGAATCTACTCCATTTTAGGTAAG
                      ____________________________________________________________
consensus             CGTCGAAAGAAGCAGTGAGACAGAGAGGTTGCTGTGGGAATCTACTCCATTTTAGGTAAG
 
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rJMSF034P16+          GAAAGAGATGACTATGGCAGCAGTCTACTAGAGGAGCAAAAAGTGTAAACTTACAATTTC
rJMFF002O11+          GAAAGAGATGACTATGGCAGCAGTCTACTAGAGGAGCAAAAAGTGTAAACTTACAATTTC
rJMFF021G24+          GAAAGAGATGACTATGGCAGCAGTCTACTAGAGGAGCAAAAAGTGTAAACTTACAATTTC
                      ____________________________________________________________
consensus             GAAAGAGATGACTATGGCAGCAGTCTACTAGAGGAGCAAAAAGTGTAAACTTACAATTTC
 
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rJMSF034P16+          TTAGATGTTTAGGAAACACAAAAATTCTTTTAGTCTCTGATTGGAGAGCTAGTGAAACTT
rJMFF002O11+          TTAGATGTTTAGGAAACACAAAAATTCTTTTAGTCTCTGATTGGAGAGCTAGTGAAACTT
rJMFF021G24+          TTAGATGTTTAGGAAACACAAAAATTCTTTTAGTCTCTGATTGGAGAGCTAGTGAAACTT
                      ____________________________________________________________
consensus             TTAGATGTTTAGGAAACACAAAAATTCTTTTAGTCTCTGATTGGAGAGCTAGTGAAACTT
 
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rJMSF034P16+          GTAATAAGTCTGTATAAATGCAGGCTATGATTTCCTGTTTTCACCTTTCACTTCCTTGCA
rJMFF002O11+          GTAATAAGTCTGTATAAATGCAGGCTATGATTTCCTGTTTTCACCTTTCACTTCCTTGCA
rJMFF021G24+          GTAATAAGTCTGTATAAATGCAGGCTATGATTTCCTGTTTTCACCTTTCACTTCCTTGCA
                      ____________________________________________________________
consensus             GTAATAAGTCTGTATAAATGCAGGCTATGATTTCCTGTTTTCACCTTTCACTTCCTTGCA
 
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rJMSF034P16+          CTTCTTGTGTATTAAATATGAGGGCT                                  
rJMFF002O11+          CTTCTTGTGTATTAAATATGAGGGCTTGCCTTCATAAAAAAGCCACTCAGTA        
rJMFF021G24+          CTTCTTGTGTATTAAATATGAGGGCTTGCCTTCATAAAAAAGCCACTCAGTATAAAAGAT
                      ____________________________________________________________
consensus             CTTCTTGTGTATTAAATATGAGGGCTTGCCTTCATAAAAAAGCCACTCAGTATAAAAGAT