Contig 005405:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF021G13-                                                               GAATTGGG
                      ____________________________________________________________
consensus                                                                 GAATTGGG
 
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JMFF021G13-           GATTGCGCCATTTTAAGTAGTAAAATTACCGTGATATCCCCCGTGCATGGTGATTGGTGA
                      ____________________________________________________________
consensus             GATTGCGCCATTTTAAGTAGTAAAATTACCGTGATATCCCCCGTGCATGGTGATTGGTGA
 
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JMFF021G13-           AACCCTAGCCCCACCCTCGTCCGGTGCATTCCATCAGTTGCTGCAGATTTCAGATTTCAT
JMSF015H13-                                           ATCAGTTGCTGCAGATTTCAGATTTCAT
                      ____________________________________________________________
consensus             AACCCTAGCCCCACCCTCGTCCGGTGCATTCCATCAGTTGCTGCAGATTTCAGATTTCAT
 
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JMFF021G13-           CGTCTCTTCTTTTTACCTTTTTCCCGACTCCATTATTGAAATTCTCCCCTCAGCGGAATA
JMSF015H13-           CGTCTCTTCTTTTTACCTTTTTCCCGACTCCATTATTGAAATTCTCCCCTCAGCGGAATA
                      ____________________________________________________________
consensus             CGTCTCTTCTTTTTACCTTTTTCCCGACTCCATTATTGAAATTCTCCCCTCAGCGGAATA
 
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JMFF021G13-           AATTCATTCGCGTTCTTAACTCAAGAAGAAGAAAGGTATATCTGCATAATGGAGGAATCA
JMSF015H13-           AATTCATTCGCGTTCTTAACTCAAGAAGAAGAAAGGTATATCTGCATAATGGAGGAATCA
                      ____________________________________________________________
consensus             AATTCATTCGCGTTCTTAACTCAAGAAGAAGAAAGGTATATCTGCATAATGGAGGAATCA
 
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JMFF021G13-           GAAAAGAGGAGAGAAAGGCTGAAGGCAATGCGACTGGAAGCGGCGCAGGCAGGAACTCAG
JMSF015H13-           GAAAAGAGGAGAGAAAGGCTGAAGGCAATGCGACTGGAAGCGGCGCAGGCAGGAACTCAG
                      ____________________________________________________________
consensus             GAAAAGAGGAGAGAAAGGCTGAAGGCAATGCGACTGGAAGCGGCGCAGGCAGGAACTCAG
 
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JMFF021G13-           GATGAAGCTGAGATTTCTATGGACCTAGCCAACCCACTAATTGAATCTCAGACGGCTCAG
JMSF015H13-           GATGAAGCTGAGATTTCTATGGACCTAGCCAACCCACTAATTGAATCTCAGACGGCTCAG
                      ____________________________________________________________
consensus             GATGAAGCTGAGATTTCTATGGACCTAGCCAACCCACTAATTGAATCTCAGACGGCTCAG
 
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JMFF021G13-           CCTAGCATAGCTGAGCCGTATTCAAGACCGAGATTCGACTTCTATACTGACCCCATGGCA
JMSF015H13-           CCTAGCATAGCTGAGCCGTATTCAAGACCGAGATTCGACTTCTATACTGACCCCATGGCA
rJMCP001H07+                                                  TCTATACTGACCCCATGGCA
                      ____________________________________________________________
consensus             CCTAGCATAGCTGAGCCGTATTCAAGACCGAGATTCGACTTCTATACTGACCCCATGGCA
 
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JMFF021G13-           GCCTACTCTGCAGACAAGAGGAAGAGCAAGCACAGCCCTCCGGTCTCACAACCATTTTCC
JMSF015H13-           GCCTACTCTGCAGACAAGAGGAAGAGCAAGCACAGCCCTCCGGTCTCACAACCATTTTCC
rJMCP001H07+          GCCTACTCTGCAGACAAGAGGAAGAGCAAGCACAGCCCTCCGGTCTCACAACCATTTTCC
                      ____________________________________________________________
consensus             GCCTACTCTGCAGACAAGAGGAAGAGCAAGCACAGCCCTCCGGTCTCACAACCATTTTCC
 
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JMFF021G13-           ACACCTCCAAGACCGGGGCACTCAGACTCTCCAGCTTATCATGCTCAGGGAAGCTACTTT
JMSF015H13-           ACACCTCCAAGACCGGGGCACTCAGACTCTCCAGCTTATCATGCTCAGGGAAGCTACTTT
rJMCP001H07+          ACACCTCCAAGACCGGGGCACTCAGACTCTCCAGCTTATCATGCTCAGGGAAGCTACTTa
                      ____________________________________________________________
consensus             ACACCTCCAAGACCGGGGCACTCAGACTCTCCAGCTTATCATGCTCAGGGAAGCTACTTT
 
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JMFF021G13-           CTAG                                                        
JMSF015H13-           CTAGATCAAAGGCCACAACAAGCACATGGAGTACATAATACCTTTAGCCCACTGCAAAGT
rJMCP001H07+          gaAGATCAAAGGCCACAACAAGCACATGGAGTACATAATACCTTTAGCCCACTGCAAAGT
                      ____________________________________________________________
consensus             CTAGATCAAAGGCCACAACAAGCACATGGAGTACATAATACCTTTAGCCCACTGCAAAGT
 
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JMSF015H13-           AGTTTGCCTGGCACACTACCAGAAAATCCTCCTAATGTTT                    
rJMCP001H07+          AGTTTGCCTGGCACACTACCAGAAAATCCTggTAATGTTTGGGGTAGTCCTGGAGGCATA
                      ____________________________________________________________
consensus             AGTTTGCCTGGCACACTACCAGAAAATCCTCCTAATGTTTGGGGTAGTCCTGGAGGCATA
 
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rJMCP001H07+          CATACCAGCAACTTTCCACCTAATTACCCAAGATTCAGTAACTTTGCAAACCATAGTCAT
rJMSF015H13+                                     CCAAGATTCAGTAACTTTGCAAACCATAGTCAT
                      ____________________________________________________________
consensus             CATACCAGCAACTTTCCACCTAATTACCCAAGATTCAGTAACTTTGCAAACCATAGTCAT
 
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rJMCP001H07+          GGACGAGGCCCTGGTTTTGATCACGCGCGAGGAAGTCCTGGTTTTGTTCATGGGCGAGGT
rJMSF015H13+          GGACGAGGCCCTGGTTTTGATCACGCGCGAGGAAGTCCTGGTTTTGTTCATGGGCGAGGT
                      ____________________________________________________________
consensus             GGACGAGGCCCTGGTTTTGATCACGCGCGAGGAAGTCCTGGTTTTGTTCATGGGCGAGGT
 
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rJMCP001H07+          AGTCCTGGTTTTGTTCATGGGCGAGGTAGCCCTGGTTTTGTTCATGGGCGAGGTAGCCCT
rJMSF015H13+          AGTCCTGGTTTTGTTCATGGGCGAGGTAGCCCTGGTTTTGTTCATGGGCGAGGTAGCCCT
rJMFF021G13+                         CATGGGCGAGGTAGCCCTGGTTTTGTTCATGGGCGAGGTAGCCCT
                      ____________________________________________________________
consensus             AGTCCTGGTTTTGTTCATGGGCGAGGTAGCCCTGGTTTTGTTCATGGGCGAGGTAGCCCT
 
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rJMCP001H07+          GG-TTTTGATCATGGGCGGGGTAGTCCTGGTTTTTATCATGGGCAAGGTAGCCCTGGTTT
rJMSF015H13+          GG-TTTTGATCATGGGCGGGGTAGTCCTGGTTTTTATCATGGGCAAGGTAGCCCTGGTTT
rJMFF021G13+          GGTTTTTGATCATGGGCGGGGTAGTCCTGNTTTTTATCATGGNCAAGGTAGCCNTGGTTT
                      ____________________________________________________________
consensus             GG-TTTTGATCATGGGCGGGGTAGTCCTGGTTTTTATCATGGGCAAGGTAGCCCTGGTTT
 
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rJMCP001H07+          TGATCAAAGGCGAGGTAGAGGATATGTATTCAGTAATAGCC                   
rJMSF015H13+          TGATCAAAGGCGAGGTAGAGGATATGTATTCAGTAATAGCCCCCGGCCATATTCAGGACG
rJMFF021G13+          TGATCAAAGGCGAGGTAGAGGATATGTATTCAGTAATAGCCCCCGGCCATATTCAGGACG
                      ____________________________________________________________
consensus             TGATCAAAGGCGAGGTAGAGGATATGTATTCAGTAATAGCCCCCGGCCATATTCAGGACG
 
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rJMSF015H13+          TGCAAACAGCCCATACCAAGATTCAGGTAGAGGCAGGGGTAGATGGCAAGGTAATAATGT
rJMFF021G13+          TGCAAACAGCCCATACCAAGATTCAGGTAGAGGCAGGGGTAGATGGCAAGGTAATAATGT
                      ____________________________________________________________
consensus             TGCAAACAGCCCATACCAAGATTCAGGTAGAGGCAGGGGTAGATGGCAAGGTAATAATGT
 
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rJMSF015H13+          TAGTTTTAGCTCTATGCAGAGTGGCAGGAGAGGATCAGGTAATCGGGAAGGCTCCTCAGC
rJMFF021G13+          TAGTTTTAGCTCTATGCAGAGTGGCAGGAGAGGATCAGGTAATCGGGAAGGCTCCTCAGC
                      ____________________________________________________________
consensus             TAGTTTTAGCTCTATGCAGAGTGGCAGGAGAGGATCAGGTAATCGGGAAGGCTCCTCAGC
 
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rJMSF015H13+          AGAGGCAAGACCAGATCTATATTATAACACGTCAATGGTAGAAGATCCATGGGAACAATT
rJMFF021G13+          AGAGGCAAGACCAGATCTATATTATAACACGTCAATGGTAGAAGATCCATGGGAACAATT
                      ____________________________________________________________
consensus             AGAGGCAAGACCAGATCTATATTATAACACGTCAATGGTAGAAGATCCATGGGAACAATT
 
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rJMSF015H13+          GCAGCCTACCATTTGGAAGAAAGTAAATACTCCCTCAAAGTACATAGATACCCCTGGCTC
rJMFF021G13+          GCAGCCTACCATTTGGAAGAAAGTAAATACTCCCTCAAAGTACATAGATACCCCTGGCTC
                      ____________________________________________________________
consensus             GCAGCCTACCATTTGGAAGAAAGTAAATACTCCCTCAAAGTACATAGATACCCCTGGCTC
 
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rJMSF015H13+          ACATAAATCACGGCTTCCAAATTCCATCAGTATGAAAAAGGCGAGGCTTGCAGAAGTTCA
rJMFF021G13+          ACATAAATCACGGCTTCCAAATTCCATCAGTATGAAAAAGGCGAGGCTTGCAGAAGTTCA
                      ____________________________________________________________
consensus             ACATAAATCACGGCTTCCAAATTCCATCAGTATGAAAAAGGCGAGGCTTGCAGAAGTTCA
 
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rJMSF015H13+          AGTGAAGTTAAGCTCTCAGCAAAGCCTTGCCGAATATCTTGCTGCCTCGTTTAATGAAGC
rJMFF021G13+          AGTGAAGTTAAGCTCTCAGCAAAGCCTTGCCGAATATCTTGCTGCCTCGTTTAATGAAGC
                      ____________________________________________________________
consensus             AGTGAAGTTAAGCTCTCAGCAAAGCCTTGCCGAATATCTTGCTGCCTCGTTTAATGAAGC
 
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rJMSF015H13+          AGCCAACGAGGGTGAAAATGACAAGTCTAGTGCATGATTTTGACTCTGAAAACTCAAATA
rJMFF021G13+          AGCCAACGAGGGTGAAAATGACAAGTCTAGTGCATGATTTTGACTCTGAAAACTCAAATA
                      ____________________________________________________________
consensus             AGCCAACGAGGGTGAAAATGACAAGTCTAGTGCATGATTTTGACTCTGAAAACTCAAATA
 
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rJMSF015H13+          GAGCCATGTAGTGACTACTGCTTCTGTTTGACACCTAGTGTTTATAAGAATCTTG     
rJMFF021G13+          GAGCCATGTAGTGACTACTGCTTCTGTTTGACACCTAGTGTTTATAAGAATCTTGTAATT
                      ____________________________________________________________
consensus             GAGCCATGTAGTGACTACTGCTTCTGTTTGACACCTAGTGTTTATAAGAATCTTGTAATT
 
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rJMFF021G13+          TTTCTAAATATTTGTCATTTCATATTTAGTCAAAGGAATCACAACAAAAAAAATGAGTGT
                      ____________________________________________________________
consensus             TTTCTAAATATTTGTCATTTCATATTTAGTCAAAGGAATCACAACAAAAAAAATGAGTGT
 
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rJMFF021G13+          TTGTTTTGAAAGTTATTTGAGATTCCTTACTCCAAGAAGTCAAAGCTTAATCAAACACNT
                      ____________________________________________________________
consensus             TTGTTTTGAAAGTTATTTGAGATTCCTTACTCCAAGAAGTCAAAGCTTAATCAAACACNT