| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020C12 | Sequence | 520 | 005403 (7) | ref|XP_008242664.1| | 133 | PREDICTED: uncharacterized protein LOC103340972 [Prunus mume] | 747 | 005403 (7) | emb|CDP03321.1| | 4e-53 | unnamed protein product [Coffea canephora] |
| JMFF033F04 | Sequence | 525 | 005403 (7) | ref|XP_010688224.1| | 204 | PREDICTED: uncharacterized protein LOC104902223 [Beta vulgaris subsp. vulgaris] | 680 | 005403 (7) | emb|CDP03321.1| | 2e-53 | unnamed protein product [Coffea canephora] |
| JMSF016A01 | Sequence | 506 | 005403 (7) | ref|XP_010688224.1| | 182 | PREDICTED: uncharacterized protein LOC104902223 [Beta vulgaris subsp. vulgaris] | 770 | 005403 (7) | ref|XP_007202457.1| | 6e-123 | hypothetical protein PRUPE_ppa010091mg [Prunus persica] gb|EMJ03656.1| hypotheti |
| JMSF032O20 | Sequence | 694 | 022165 | 675 | 005403 (7) | ||||||
This contig is upended
. : . : . : . : . : . :
JMSF016A01- GGGGGGA
JMFF020C12- GATAAAAGGGGAGA
JMFF033F04- GGGGAGA
____________________________________________________________
consensus GATAAAAGGGGAGA
. : . : . : . : . : . :
JMSF016A01- GATAGAGAGAGAGAGAGACTGTTGAAATCTGTANACTACTGAGCAAAGAANAGTCTGAAA
JMFF020C12- GATAGAGAGAGAGAGAGACTGTTGAAATCTGTAGACTACTGAGCAAAGAAGAGTCTGAAA
JMFF033F04- GATAGAGAGAGAGAGAGACTGTTGAAATCTGTAGACTACTGAGCAAAGAAGAGTCTGAAA
____________________________________________________________
consensus GATAGAGAGAGAGAGAGACTGTTGAAATCTGTAGACTACTGAGCAAAGAAGAGTCTGAAA
. : . : . : . : . : . :
JMSF016A01- TTGGGTTTGCGGAGGAAAGTAATGGGAGATGACAAATCGGGGATGGTGGGTACTATTGGG
JMFF020C12- TTGGGTTTGCGGAGGAAAGTAATGGGAGATGACAAATCGGGGATGGTGGGTACTATTGGG
JMFF033F04- TTGGGTTTGCGGAGGAAAGTAATGGGAGATGACAAATCGGGGATGGTGGGTACTATTGGG
____________________________________________________________
consensus TTGGGTTTGCGGAGGAAAGTAATGGGAGATGACAAATCGGGGATGGTGGGTACTATTGGG
. : . : . : . : . : . :
JMSF016A01- AACTCCAGTANANAAAGANATCGGGAGCTTCTCATACCCGTGGCTGTCTCCGCCGGCGGC
JMFF020C12- AACTCCAGTAGAGAAAGAGATCGGGAGCTTCTCATACCCGTGGCTGTCTCCGCCGGCGGC
JMFF033F04- AACTCCAGTAGAGAAAGAGATCGGGAGCTTCTCATACCCGTGGCTGTCTCCGCCGGCGGC
____________________________________________________________
consensus AACTCCAGTAGAGAAAGAGATCGGGAGCTTCTCATACCCGTGGCTGTCTCCGCCGGCGGC
. : . : . : . : . : . :
JMSF016A01- GTTGACNACCATGACTCCAAGCCGTCGTCCTCCGCCGCGTCTGCTCACCACCTTCATTCC
JMFF020C12- GTTGACGACCATGACTCCAAGCCGTCGTCCTCCGCCGCGTCTGCTCACCACCTTCGTTCC
JMFF033F04- GTTGACGACCATGACTCCAAGCCGTCGTCCTCCGCCGCGTCTGCTCACCACCTTCATTCC
____________________________________________________________
consensus GTTGACGACCATGACTCCAAGCCGTCGTCCTCCGCCGCGTCTGCTCACCACCTTCATTCC
. : . : . : . : . : . :
JMSF016A01- GGCCGCGAGACTTTCTACAAAGTTGTTAGGAGTTGGGCTTCAAAGAAATTCATGACTGGA
JMFF020C12- GGCCGCGAGACTTTCTACAAAGTTGTTAGGAGTTGGGCTTCAAAGAAATTCATGACTGGA
JMFF033F04- GGCCGCGAGACTTTCTACAAAGTTGTTAGGAGTTGGGCTTCAAAGAAATTCATGACTGGA
____________________________________________________________
consensus GGCCGCGAGACTTTCTACAAAGTTGTTAGGAGTTGGGCTTCAAAGAAATTCATGACTGGA
. : . : . : . : . : . :
JMSF016A01- TGTGTCATTCTATTTCCAATAGCAGTGACATTTTATATAACATGGNGGTTTATTCACTTT
JMFF020C12- TGTGTCATTCTATTTCCAATAGCAGTGACATTTTATATAACATGGTGGTTTATTCACTTT
JMFF033F04- TGTGTCATTCTATTTCCAATAGCAGTGACATTTTATATAACATGGTGGTTTATTCACTTT
rJMSF016A01+ ATAGCAGTGACATTTTATATAACATGGTGGTTTATTCACTTT
____________________________________________________________
consensus TGTGTCATTCTATTTCCAATAGCAGTGACATTTTATATAACATGGTGGTTTATTCACTTT
. : . : . : . : . : . :
JMSF016A01- GTGGATAGCTTTTTCTCCCCCATCTATCTGCAGCTTGGTATCAATATATTTGGTCTCGGA
JMFF020C12- GTGGATAGCTTTTTCTCCCCCATCTATCTGCAGCTTGGTATCA--ATATTTGGTCTCGGA
JMFF033F04- GTGGATAGCTTTTTCTCCCCCATCTATCTGCAGCTTGGTATCAATATATTTGGTCTCGGA
rJMSF016A01+ GTGGATAGCTTTTTCTCCCCCATCTATCTGCAGCTTGGTATCAATATATTTGGTCTCGGA
____________________________________________________________
consensus GTGGATAGCTTTTTCTCCCCCATCTATCTGCAGCTTGGTATCAATATATTTGGTCTCGGA
. : . : . : . : . : . :
JMSF016A01- TTTGTGACCTCAATCACTTTCATTTTCTTGGTTGGAGTATTCATGTCATCATGGTTGGGG
JMFF020C12- TTTGTGACCTCAATCACTTTCATTTTCTTGGTTGGAGTATTCATGTCATCATGGTTGGGG
JMFF033F04- TTTGTGACCTCAATCACTTTCATTTTCTTGGTTGGAGTATTCATGTCATCATGGTTGGGG
rJMSF016A01+ TTTGTGACCTCAATCACTTTCATTTTCTTGGTTGGAGTATTCATGTCATCATGGTTGGGG
____________________________________________________________
consensus TTTGTGACCTCAATCACTTTCATTTTCTTGGTTGGAGTATTCATGTCATCATGGTTGGGG
. : . : . : . : . : . :
JMSF016A01- GCATCTGTTTTAG
JMFF020C12- GCATCTGTTTTAGGTCTTGGGGAATGGT
JMFF033F04- GCATCTGTTTTAGGTCTTGGGGAATGGTTCATC
rJMSF016A01+ GCATCTGTTTTAGGTCTTGGGGAATGGTTCATCAAAAGAATGCCTTTTGTTCGTCATATC
____________________________________________________________
consensus GCATCTGTTTTAGGTCTTGGGGAATGGTTCATCAAAAGAATGCCTTTTGTTCGTCATATC
. : . : . : . : . : . :
rJMSF016A01+ TATAATGCCTCTAAGCAAATTAGTTCTGCCATATCTCCAGATCAGAACACTCAGGCTTTC
____________________________________________________________
consensus TATAATGCCTCTAAGCAAATTAGTTCTGCCATATCTCCAGATCAGAACACTCAGGCTTTC
. : . : . : . : . : . :
rJMSF016A01+ AAGGAAGTGGCCATCATAAGGCATCCACGTATTGGTGAATATGCATTTGGGTTCATTACT
____________________________________________________________
consensus AAGGAAGTGGCCATCATAAGGCATCCACGTATTGGTGAATATGCATTTGGGTTCATTACT
. : . : . : . : . : . :
rJMSF016A01+ TCTTCTGTTGTTCTTCAGAACTATTCAGGAGATGAAGAGCTATGCTGTGTGTATGTTCCT
rJMFF033F04+ CAGAACTATTCAGGAGATGAAGAGCTATGCTGTGTGTATGTTCCT
rJMFF020C12+ CAGAACTATTCAGGAGATGAAGAGCTATGCTGTGTGTATGTTCCT
____________________________________________________________
consensus TCTTCTGTTGTTCTTCAGAACTATTCAGGAGATGAAGAGCTATGCTGTGTGTATGTTCCT
. : . : . : . : . : . :
rJMSF016A01+ ACAAACCATCTCTACATTGGTGATATATTCCTGGTCAATGCAAACGATGTTATAAGACCG
rJMFF033F04+ ACAAACCATCTCTACATTGGTGATATATTCCTGGTCAATGCAAACGATGTTATAAGACCG
rJMFF020C12+ ACAAACCATCTCTACATTGGTGATATATTCCTGGTCAATGCAAACGATGTTATAAGACCG
____________________________________________________________
consensus ACAAACCATCTCTACATTGGTGATATATTCCTGGTCAATGCAAACGATGTTATAAGACCG
. : . : . : . : . : . :
rJMSF016A01+ AACTTGTCAGTTCGTGAAGGGATTGAGATTGTCGTATCTGGTGGCATGTCGATGCCCCAG
rJMFF033F04+ AACTTGTCAGTTCGTGAAGGGATTGAGATTGTCGTATCTGGTGGCATGTCGATGCCCCAG
rJMSF032O20+ TGGCATGTCGATGCCCCAG
rJMFF020C12+ AACTTGTCAGTTCGTGAAGGGATTGAGATTGTCGTATCTGGTGGCATGTCGATGCCCCAG
____________________________________________________________
consensus AACTTGTCAGTTCGTGAAGGGATTGAGATTGTCGTATCTGGTGGCATGTCGATGCCCCAG
. : . : . : . : . : . :
rJMSF016A01+ ATTTTATCAACGCTGGATCAAAGAATCGTTCAAAGTTGATAGGGTTAGACCTGACAGAAG
rJMFF033F04+ ATTTTATCAACGCTGGATCAAAGAATCGTTCAAAGTTGATAGGGTTAGACCTGACAGAAG
rJMSF032O20+ ATTTTATCAACGCTGGATCAAAGAATCGTTCAAAGTTGATAGGGTTAGACCTGACAGAAG
rJMFF020C12+ ATTTTATCAACGCTGGATCAAAGAATCGTTCAAAGTTGATAGGGTTAGACCTGACAGAAG
____________________________________________________________
consensus ATTTTATCAACGCTGGATCAAAGAATCGTTCAAAGTTGATAGGGTTAGACCTGACAGAAG
. : . : . : . : . : . :
rJMSF016A01+ TTGAGACTGAAGATAATAGACATAGCCGACGGCCTTGAATTCCATCACGTTTTTTAAACG
rJMFF033F04+ TTGAGACTGAAGATAATAGACATAGCCGACGGCCTTGAATTCCATCACGTTTTTTAAACG
rJMSF032O20+ TTGAGACTGAAGATAATAGACATAGCCGACGGCCTTGAATTCCATCACGTTTTTTAAACG
rJMFF020C12+ TTGAGACTGAAGATAATAGACATAGCCGACGGCCTTGAATTCCATCACGTTTTTTAAACG
____________________________________________________________
consensus TTGAGACTGAAGATAATAGACATAGCCGACGGCCTTGAATTCCATCACGTTTTTTAAACG
. : . : . : . : . : . :
rJMSF016A01+ TTGCAGACTGGGGCACGGGCACCTCACCAGCACCAACACCTGCAACCCTATCGATTGGCA
rJMFF033F04+ TTGCAGACTGGGGCACGGGCACCTCACCAGCACCAACACCTGCAACCCTATCGATTGGCA
rJMSF032O20+ TTGCAGACTGGGGCACGGGCACCTCACCAGCACCAACACCTGCAACCCTATCGATTGGCA
rJMFF020C12+ TTGCAGACTGGGGCACGGGCACCTCACCAGCACCAACACCTGCAACCCTATCGATTGGCA
____________________________________________________________
consensus TTGCAGACTGGGGCACGGGCACCTCACCAGCACCAACACCTGCAACCCTATCGATTGGCA
. : . : . : . : . : . :
rJMSF016A01+ CAAGTTTTTTTCCGATTTATTTGATTTTTGAATCATTAGATTAGATTGAGTTGCTTT
rJMFF033F04+ CAAGTTTTTTTCCGATTTATTTGATTTTTGAATCATTAGATTAGATTGAGTTGCTTTTGT
rJMSF032O20+ CAAGTTTTTTTCCGATTTATTTGATTTTTGAATCATTAGATTAGATTGAGTTGCTTTTGT
rJMFF020C12+ CAAGTTTTTTTCCGATTTATTTGATTTTTGAATCATTAGATTAGATTGAGTTGCTTTTGT
____________________________________________________________
consensus CAAGTTTTTTTCCGATTTATTTGATTTTTGAATCATTAGATTAGATTGAGTTGCTTTTGT
. : . : . : . : . : . :
rJMFF033F04+ AACAAGATTTGGTAGTGTACAATGTAGAGAAAGTAGGGTTTGTGTGGAAATATAGTTGAT
rJMSF032O20+ AACAAGATTTGGTAGTGTACAATGTAGAGAAAGTAGGGTTTGTGTGGAAATATAGTTGAT
rJMFF020C12+ AACAAGATTTGGTAGTGTACAATGTAGAGAAAGTAGGGTTTGTGTGGAAATATAGTTGAT
____________________________________________________________
consensus AACAAGATTTGGTAGTGTACAATGTAGAGAAAGTAGGGTTTGTGTGGAAATATAGTTGAT
. : . : . : . : . : . :
rJMFF033F04+ TAATACTACTACTTCCATGATTATTTATAGGCTGTTTGAATGTTGAGATCCTTCTTCCCA
rJMSF032O20+ TAATACTACTACTTCCATGATTATTTATAGGCTGTTTGAATGTTGAGATCCTTCTTCCCA
rJMFF020C12+ TAATACTACTACTTCCATGATTATTTATAGGCTGTTTGAATGTTGAGATCCTTCTTCCCA
____________________________________________________________
consensus TAATACTACTACTTCCATGATTATTTATAGGCTGTTTGAATGTTGAGATCCTTCTTCCCA
. : . : . : . : . : . :
rJMFF033F04+ AGAGTCTCTCTCCTGGTAATTCCGGAATACCACTTCATCACTTCTGTAAATAAAA
rJMSF032O20+ AGAGTCTCTCTCCTGGTAATTCCGGAATACCACTTCATCACTTCTGTAAATAAAAGGGGG
rJMFF020C12+ AGAGTCTCTCTCCTGGTAATTCCGGAATACCACTTCATCACTTCTGTAAATAAAAGAGGG
____________________________________________________________
consensus AGAGTCTCTCTCCTGGTAATTCCGGAATACCACTTCATCACTTCTGTAAATAAAAGGGGG
. : . : . : . : . : . :
rJMSF032O20+ TTTTATTAGTTAAAATAAATTGGTTATTCAGT
rJMFF020C12+ TTTTATTAGTTAAAATAAATTGGTTATTCAGTTGTAAACACCATTATACTTGAGGTATAT
____________________________________________________________
consensus TTTTATTAGTTAAAATAAATTGGTTATTCAGTTGTAAACACCATTATACTTGAGGTATAT