Contig 005401:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF018K18+           TTCAGATGAACCGTCTCCAAGGTGTTTGACTGCTGCACGGACACTCTGTGAAATTGCAA
rJMFF019O07+          CTTCAGATGAACCGTCTCCAAGGTGTTTGACTGCTGCACGGACACTCTGTGAAATTGCAA
                      ____________________________________________________________
consensus             CTTCAGATGAACCGTCTCCAAGGTGTTTGACTGCTGCACGGACACTCTGTGAAATTGCAA
 
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rJMSF018K18+          CTCAATCAGTGAAGCACAACACAAACGGAACTGTGAAATGTATAAAGAAACCTACTCAGA
rJMFF019O07+          CTCAATCAGTGAAGCACAACACAAACGGAACTGTGAAATGTATAAAGAAACCTACTCAGA
                      ____________________________________________________________
consensus             CTCAATCAGTGAAGCACAACACAAACGGAACTGTGAAATGTATAAAGAAACCTACTCAGA
 
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rJMSF018K18+          AGTCCTCGAGAGCTCCAAAGCTGAAGTTGAATGAGAAATCTGAAAAACCATTTGCAGCAC
rJMFF019O07+          AGTCCTCGAGAGCTCCAAAGCTGAAGTTGAATGAGAAATCTGAAAAACCATTTGCAGCAC
                      ____________________________________________________________
consensus             AGTCCTCGAGAGCTCCAAAGCTGAAGTTGAATGAGAAATCTGAAAAACCATTTGCAGCAC
 
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rJMSF018K18+          CAAAAGTTGTGGGATCGGACAATATGATCAGAGTTTCTGATGGCACACTTCCCTCAAAAA
rJMFF019O07+          CAAAAGTTGTGGGATCGGACAATATGATCAGAGTTTCTGATGGCACACTTCCCTCAAAAA
                      ____________________________________________________________
consensus             CAAAAGTTGTGGGATCGGACAATATGATCAGAGTTTCTGATGGCACACTTCCCTCAAAAA
 
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rJMSF018K18+          AGCCTAAGCTATCATTGGGCACAGAGAGAAATGGAATCGTTCCTAGAAACTTTGATAGAA
rJMFF019O07+          AGCCTAAGCTATCATTGGGCACAGAGAGAAATGGAATCTTTCCTAGAAAC-TTGATAGAA
                      ____________________________________________________________
consensus             AGCCTAAGCTATCATTGGGCACAGAGAGAAATGGAATCTTTCCTAGAAACTTTGATAGAA
 
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rJMSF018K18+          AGGGACCACCGCATTGGTCAGCTCCGCGATCAGTTAGATCATCTCCTAGCAAATTCTTTA
rJMFF019O07+          AGGGACCACCGCATTGGTCAGCTCCGCGATCAGTTAGATCATCTCCTAGCAAATTCTTTA
                      ____________________________________________________________
consensus             AGGGACCACCGCATTGGTCAGCTCCGCGATCAGTTAGATCATCTCCTAGCAAATTCTTTA
 
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rJMSF018K18+          AAGACGCAACTGCAGAAACTAAAGGTCACAATAGCAACTTTGTAGATAAACTTTATATGA
rJMFF019O07+          AAGACGCAACTGCAGAAACTAAAGGTCACAATAGCAACTTTGTAGATAAACTTTATATGA
                      ____________________________________________________________
consensus             AAGACGCAACTGCAGAAACTAAAGGTCACAATAGCAACTTTGTAGATAAACTTTATATGA
 
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rJMSF018K18+          TGCCCCCACCTGCAAGGATGAAGGACAAGGGTTCTAGCAGTCAACAAAAACCGAGGAAGG
rJMFF019O07+          TGCCCCCACCTGCAAGGATGAAGGACAAGGGTTCTAGCAGTCAACAAAAACCGAGGAAGG
                      ____________________________________________________________
consensus             TGCCCCCACCTGCAAGGATGAAGGACAAGGGTTCTAGCAGTCAACAAAAACCGAGGAAGG
 
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rJMSF018K18+          TTTTATCAGGGGAGTGGAACCATTCAAGTAGCAAGATGGAGTGAAGACACACCAGGGTAC
rJMFF019O07+          TTTTATCAGGGGAGTGGAACCATTCAAGTAGCAAGATGGAGTGAAGACACACCAGGGTAC
                      ____________________________________________________________
consensus             TTTTATCAGGGGAGTGGAACCATTCAAGTAGCAAGATGGAGTGAAGACACACCAGGGTAC
 
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rJMSF018K18+          ATGAACATCTAGTTTGTTGTTGCACAAGTGATTTGTTCAGTTTAACTTTTAGATCACCAA
rJMFF019O07+          ATGAACATCTAGTTTGTTGTTGCACAAGTGATTTGTTCAGTTTAACTTTTAGATCACCAA
                      ____________________________________________________________
consensus             ATGAACATCTAGTTTGTTGTTGCACAAGTGATTTGTTCAGTTTAACTTTTAGATCACCAA
 
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rJMSF018K18+          AACTGGTAGGGTTCTGTATATTCTGTTGTGTGAAGGGGGGAGTTGGTAGCTTTCTTGATT
rJMFF019O07+          AACTGGTAGGGTTCTGTATATTCTGTTGTGTGAAGGGGGGAGTTGGTAGCTTTCTTGATT
                      ____________________________________________________________
consensus             AACTGGTAGGGTTCTGTATATTCTGTTGTGTGAAGGGGGGAGTTGGTAGCTTTCTTGATT
 
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rJMSF018K18+          TCAGGAGAACAGGCCTGTTGTATCAATATTTGTTAA                        
rJMFF019O07+          TCAGGAGAACAGGCCTGTTGTATCAATATTTGTTAACTGGTGTCAGATCAGAATAGAAAT
                      ____________________________________________________________
consensus             TCAGGAGAACAGGCCTGTTGTATCAATATTTGTTAACTGGTGTCAGATCAGAATAGAAAT