Contig 005397:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018E15Sequence522003208 (7)ref|XP_009612875.1|3e-50PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]763005397 (3)ref|XP_009608295.1|2e-109PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis]
JMFF026O14Sequence521003208 (7)ref|XP_009612875.1|1e-50PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]768005397 (3)ref|XP_009608295.1|3e-110PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis]
JMFF031H04Sequence603003208 (7)ref|XP_009612875.1|2e-51PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis]716005397 (3)ref|XP_009608295.1|1e-103PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF026O14+ CNTACGGAGTTTAGGTAATCTTGTGGCTGGTGAAACTCGTATAACTAATG
rJMFF031H04+ AAACTCGTATAACTAATG
rJMFF018E15+ AGTTTAGGTAATCTTGTGGCTGGTGAAACTCGTATAACTAATG
                      ____________________________________________________________
consensus CNTACGGAGTTTAGGTAATCTTGTGGCTGGTGAAACTCGTATAACTAATG
 
. : . : . : . : . : . :
rJMFF026O14+ CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
rJMFF031H04+ CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
rJMFF018E15+ CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
                      ____________________________________________________________
consensus CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
 
. : . : . : . : . : . :
rJMFF026O14+ TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
rJMFF031H04+ TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
rJMFF018E15+ TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
                      ____________________________________________________________
consensus TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
 
. : . : . : . : . : . :
rJMFF026O14+ CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
rJMFF031H04+ CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
rJMFF018E15+ CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
                      ____________________________________________________________
consensus CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
 
. : . : . : . : . : . :
rJMFF026O14+ ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
rJMFF031H04+ ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
rJMFF018E15+ ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
                      ____________________________________________________________
consensus ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
 
. : . : . : . : . : . :
rJMFF026O14+ TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
rJMFF031H04+ TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
rJMFF018E15+ TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
                      ____________________________________________________________
consensus TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
 
. : . : . : . : . : . :
rJMFF026O14+ CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
rJMFF031H04+ CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
rJMFF018E15+ CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
                      ____________________________________________________________
consensus CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
 
. : . : . : . : . : . :
rJMFF026O14+ AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
rJMFF031H04+ AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
rJMFF018E15+ AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
                      ____________________________________________________________
consensus AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
 
. : . : . : . : . : . :
rJMFF026O14+ AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
rJMFF031H04+ AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
rJMFF018E15+ AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
                      ____________________________________________________________
consensus AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
 
. : . : . : . : . : . :
rJMFF026O14+ ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
rJMFF031H04+ ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
rJMFF018E15+ ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
                      ____________________________________________________________
consensus ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
 
. : . : . : . : . : . :
rJMFF026O14+ AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
rJMFF031H04+ AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
rJMFF018E15+ AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
                      ____________________________________________________________
consensus AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
 
. : . : . : . : . : . :
rJMFF026O14+ TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
rJMFF031H04+ TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
rJMFF018E15+ TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
                      ____________________________________________________________
consensus TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
 
. : . : . : . : . : . :
rJMFF026O14+ CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTTAAATGCCATTGGTTCAAGTC
rJMFF031H04+ CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTT
rJMFF018E15+ CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTTAAATGCCATTGGTTCAAGTCAT
                      ____________________________________________________________
consensus CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTTAAATGCCATTGGTTCAAGTCAT