| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018E15 | Sequence | 522 | 003208 (7) | ref|XP_009612875.1| | 3e-50 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | 763 | 005397 (3) | ref|XP_009608295.1| | 2e-109 | PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis] |
| JMFF026O14 | Sequence | 521 | 003208 (7) | ref|XP_009612875.1| | 1e-50 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | 768 | 005397 (3) | ref|XP_009608295.1| | 3e-110 | PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis] |
| JMFF031H04 | Sequence | 603 | 003208 (7) | ref|XP_009612875.1| | 2e-51 | PREDICTED: importin subunit alpha-2 [Nicotiana tomentosiformis] | 716 | 005397 (3) | ref|XP_009608295.1| | 1e-103 | PREDICTED: importin subunit alpha-2-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF026O14+ CNTACGGAGTTTAGGTAATCTTGTGGCTGGTGAAACTCGTATAACTAATG
rJMFF031H04+ AAACTCGTATAACTAATG
rJMFF018E15+ AGTTTAGGTAATCTTGTGGCTGGTGAAACTCGTATAACTAATG
____________________________________________________________
consensus CNTACGGAGTTTAGGTAATCTTGTGGCTGGTGAAACTCGTATAACTAATG
. : . : . : . : . : . :
rJMFF026O14+ CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
rJMFF031H04+ CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
rJMFF018E15+ CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
____________________________________________________________
consensus CTGTTCTTGTCGCTGGAAACGAGATAACAGATGCGTTTATCCAAGCACAGGTGAAGTGTT
. : . : . : . : . : . :
rJMFF026O14+ TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
rJMFF031H04+ TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
rJMFF018E15+ TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
____________________________________________________________
consensus TGAAAAGCGAACATCGTATCTTGAAGAAGGAAGCAGCTTGGGTACTATCTAATCTAGCAG
. : . : . : . : . : . :
rJMFF026O14+ CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
rJMFF031H04+ CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
rJMFF018E15+ CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
____________________________________________________________
consensus CCGGGTCTGCAGAACATAAGAAATTAATACATTCAAGCGATGCGTTGGCAGTGTTATTGC
. : . : . : . : . : . :
rJMFF026O14+ ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
rJMFF031H04+ ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
rJMFF018E15+ ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
____________________________________________________________
consensus ACCTTCTTTCGACAGCACCTTTTGACATAAAAAAGGAGGTAGCATATGTTCTGGGCAACC
. : . : . : . : . : . :
rJMFF026O14+ TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
rJMFF031H04+ TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
rJMFF018E15+ TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
____________________________________________________________
consensus TCTGTGTTGCCCCGGATGACGGTTCTGGAATGCCAAAGTTGATACTGGAACACTTGGTTT
. : . : . : . : . : . :
rJMFF026O14+ CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
rJMFF031H04+ CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
rJMFF018E15+ CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
____________________________________________________________
consensus CCCTCGTGGGAAGAGGATGCCTTTCCGGATTCGTTGATTTAGTAAGGTCAGTCGACGCTG
. : . : . : . : . : . :
rJMFF026O14+ AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
rJMFF031H04+ AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
rJMFF018E15+ AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
____________________________________________________________
consensus AGGCTGCAAGACTCGGGATGCAATTTCTTGAGCTGGTTCTAAGGGGAATGCCAAACCGCG
. : . : . : . : . : . :
rJMFF026O14+ AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
rJMFF031H04+ AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
rJMFF018E15+ AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
____________________________________________________________
consensus AGGGCCCAAAGCTGGTGGAGAAGGAGGATGGCATCGAAGCCTTGGAGCGATACCAATTCC
. : . : . : . : . : . :
rJMFF026O14+ ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
rJMFF031H04+ ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
rJMFF018E15+ ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
____________________________________________________________
consensus ACGAAAACGAAGAACTGAGGGGCATGGCTAATGAGTTGCTGGACAAGTACTATGGGGATG
. : . : . : . : . : . :
rJMFF026O14+ AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
rJMFF031H04+ AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
rJMFF018E15+ AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
____________________________________________________________
consensus AGTATGGACTTGAAGAGTAGAAAGAGCAGTGATGATGTATTCTGCAAATGTTTACTGGAA
. : . : . : . : . : . :
rJMFF026O14+ TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
rJMFF031H04+ TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
rJMFF018E15+ TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
____________________________________________________________
consensus TTTTGATGTCTCTCCTCTTGTGTGCCAAAACTCTAGCCCCCTTGAAACCATTCTGCTGTA
. : . : . : . : . : . :
rJMFF026O14+ CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTTAAATGCCATTGGTTCAAGTC
rJMFF031H04+ CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTT
rJMFF018E15+ CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTTAAATGCCATTGGTTCAAGTCAT
____________________________________________________________
consensus CTGCCTTTTGTACAAATATCAAATAGGTGGAGAGTTTTAAATGCCATTGGTTCAAGTCAT