Contig 005390:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017J17Sequence597003568 (3)779005390 (2)
JMSF009G20Sequence362003568 (3)756005390 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009G20+ GGAAGTAAAAGAATAAATAAAACTTTCCAAACAACTCCTTATCATATGAATGGGTCTT
rJMFF017J17+ CAGGAAGTAAAAGAATAAATAAAACTTTCCAAACAACTCCTTATCATATGAATGGGTCTT
                      ____________________________________________________________
consensus CAGGAAGTAAAAGAATAAATAAAACTTTCCAAACAACTCCTTATCATATGAATGGGTCTT
 
. : . : . : . : . : . :
rJMSF009G20+ TAAATACAAAAAAAGATTTCTAATGGTAGATATGTCAAGGAAATCCATCATTCTTGTACT
rJMFF017J17+ TAAATACAAAAAAAGATTTCTAATGGTAGATATGTCAAGGAAATCCATCATTCTTGTACT
                      ____________________________________________________________
consensus TAAATACAAAAAAAGATTTCTAATGGTAGATATGTCAAGGAAATCCATCATTCTTGTACT
 
. : . : . : . : . : . :
rJMSF009G20+ CTTTAACAAAGTAGAATGAAAAAATTATGTCTCTTAAAACTGCTATAAAAATTATGCCAT
rJMFF017J17+ CTTTAACAAAGTAGAATGAAAAAATTATGTCTCTTAAAACTGCTATAAAAATTATGCCAT
                      ____________________________________________________________
consensus CTTTAACAAAGTAGAATGAAAAAATTATGTCTCTTAAAACTGCTATAAAAATTATGCCAT
 
. : . : . : . : . : . :
rJMSF009G20+ GAACATAGGTGCCCTTAAAAAAGAAAACAGACATTTAGAAAGATAGTATAGCTGAAAATT
rJMFF017J17+ GAACATAGGTGCCCTTAAAAAAGAAAACAGACATTTAGAAAGATAGTATAGCTGAAAATT
                      ____________________________________________________________
consensus GAACATAGGTGCCCTTAAAAAAGAAAACAGACATTTAGAAAGATAGTATAGCTGAAAATT
 
. : . : . : . : . : . :
rJMSF009G20+ AAGAACTGAAAAATAGTATTTAGAACCCTAAACCCTTACCTCAGAATCATGGTAGGTAGA
rJMFF017J17+ AAGAACTGAAAAATAGTATTTAGAACCCTAAACCCTTACCTCAGAATCATGGTAGGTAGA
                      ____________________________________________________________
consensus AAGAACTGAAAAATAGTATTTAGAACCCTAAACCCTTACCTCAGAATCATGGTAGGTAGA
 
. : . : . : . : . : . :
rJMSF009G20+ GACTCTCTTTATTAGAATTGTGTTTCGACCTTCAGGGACAAATGTAGGTTCGCACTAACC
rJMFF017J17+ GACTCTCTTTATTAGAATTGTGTTTCGACCTTCAGGGACAAATGTAGGTTCGCACTAACC
                      ____________________________________________________________
consensus GACTCTCTTTATTAGAATTGTGTTTCGACCTTCAGGGACAAATGTAGGTTCGCACTAACC
 
. : . : . : . : . : . :
rJMSF009G20+ TTAACCTTGTAGCTTTTTTGGTATAATGGTGCCATTTTAGGTTTTGCAAATGTTTAAACA
rJMFF017J17+ TTAACCTTGTAGCTTTTTTGGTATAATGGTGCCATTTTAGGTTTTGCAAATGTTTAAACA
                      ____________________________________________________________
consensus TTAACCTTGTAGCTTTTTTGGTATAATGGTGCCATTTTAGGTTTTGCAAATGTTTAAACA
 
. : . : . : . : . : . :
rJMSF009G20+ AATTTGTTGATCAAAGCTTAGAAGAGATTCAAAGAAGAAGGATGTGGCAACAACAAAGAA
rJMFF017J17+ AATTTGTTGATCAAAGCTTAGAAGAGATTCAAAGAAGAAGGATGTGGCAACAACAAAGAA
                      ____________________________________________________________
consensus AATTTGTTGATCAAAGCTTAGAAGAGATTCAAAGAAGAAGGATGTGGCAACAACAAAGAA
 
. : . : . : . : . : . :
rJMSF009G20+ GAAGGAGGTGGCTTTAGTTGCTGCTCCCTGCTGGTAGTGTACTATTTATAGCAGAAGTAT
rJMFF017J17+ GAAGGAGGTGGCTTTAGTTGCTGCTCCCTGCTGGTAGTGTACTATTTATAGCAGAAGTAT
                      ____________________________________________________________
consensus GAAGGAGGTGGCTTTAGTTGCTGCTCCCTGCTGGTAGTGTACTATTTATAGCAGAAGTAT
 
. : . : . : . : . : . :
rJMSF009G20+ GAAGCAGATGGAGTTCTAAAAAGTATACAATATTAATGAAATTGGATCATTGTGTTGCAC
rJMFF017J17+ GAAGCAGATGGAGTTCTAAAAAGTATACAATATTAATGAAATTGGATCATTGTGTTGCAC
                      ____________________________________________________________
consensus GAAGCAGATGGAGTTCTAAAAAGTATACAATATTAATGAAATTGGATCATTGTGTTGCAC
 
. : . : . : . : . : . :
rJMSF009G20+ CGGTTATCCAAACGCCAAAAGTAAAGGCTGCTGCTTTGAAAAACTTAATTTGTATTAAGT
rJMFF017J17+ CGGTTATCCAAACGCCAAAAGTAAAGGCTGCTGCTTTGAAAAACTTAATTTGTATTAAGT
                      ____________________________________________________________
consensus CGGTTATCCAAACGCCAAAAGTAAAGGCTGCTGCTTTGAAAAACTTAATTTGTATTAAGT
 
. : . : . : . : . : . :
rJMSF009G20+ AGTGTTTTATTAGTCTTCTAATTTTAAGCCTTCAGATTTTAAAAAAATTGTAATTCATGT
rJMFF017J17+ AGTGTTTTATTAGTCTTCTAATTTTAAGCCTTCAGATTTT-AAAAAATTGTAATTCATGT
                      ____________________________________________________________
consensus AGTGTTTTATTAGTCTTCTAATTTTAAGCCTTCAGATTTTAAAAAAATTGTAATTCATGT
 
. : . : . : . : . : . :
rJMSF009G20+ TGTGTGTATTATGTAGACAATGCATTAACT
rJMFF017J17+ TGTGTGTATTATGTAGACAATGCATTAACTTGGAACAATTTCCAATGAGCCAATTAAAAG
                      ____________________________________________________________
consensus TGTGTGTATTATGTAGACAATGCATTAACTTGGAACAATTTCCAATGAGCCAATTAAAAG