Contig 005384:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A21Sequence601002211 (4)ref|XP_006339420.1|261PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]662005384 (4)ref|XP_009609631.1|109PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMFF016F07Sequence605002211 (4)ref|XP_009614536.1|359PREDICTED: uncharacterized protein LOC104107438 [Nicotiana tomentosiformis]653005384 (4)ref|XP_009609631.1|109PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMSF020M02Sequence669002211 (4)ref|XP_006339420.1|283PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]747005384 (4)ref|XP_009609631.1|132PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]
JMSF021C20Sequence673002211 (4)ref|XP_006339420.1|283PREDICTED: uncharacterized protein LOC102603324 [Solanum tuberosum]806005384 (4)ref|XP_009609631.1|164PREDICTED: uncharacterized protein LOC104103435 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF021C20+                        ATGGTCGTAACGTGCCTGTTTCCATAGATGATGACGAGTATGTGGA
                      ____________________________________________________________
consensus                           ATGGTCGTAACGTGCCTGTTTCCATAGATGATGACGAGTATGTGGA
 
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rJMSF021C20+          ATACACACTCGATAATTTGGCAGATTTTCCAAGCAGTATGGAGGAAGAAGAAAGGATGTT
rJMSF020M02+                       AATTTGGCAGATTTTCCAAGCAGTATGGAGGAAGAAGAAAGGATGTT
                      ____________________________________________________________
consensus             ATACACACTCGATAATTTGGCAGATTTTCCAAGCAGTATGGAGGAAGAAGAAAGGATGTT
 
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rJMSF021C20+          CATGGAAGCAGTATTAGAGTCACTGAAAGACTTAGAAGTGTCGAAAACCCCTCATGTTGA
rJMSF020M02+          CATGGAAGCAGTATTAGAGTCACTGAAAGACTTAGAAGTGTCGAAAACCCCTCATGTTGA
rJMFF001A21+                                                                    GA
                      ____________________________________________________________
consensus             CATGGAAGCAGTATTAGAGTCACTGAAAGACTTAGAAGTGTCGAAAACCCCTCATGTTGA
 
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rJMSF021C20+          GTCAAGCAACGGACAACCAGATCCATTCCCAAAAAATATTCTCGACTCTTCCACATCAAA
rJMSF020M02+          GTCAAGCAACGGACAACCAGATCCATTCCCAAAAAATATTCTCGACTCTTCCACATCAAA
rJMFF001A21+          GTCAAGCAACGGACAACCAGATCCATTCCCAAAAAATATTCTCGACTCTTCCACATCAAA
rJMFF016F07+                 AACGGACAACCAGATCCATTCCCAAAAAATATTCTNGACTCTTCCACATCAAA
                      ____________________________________________________________
consensus             GTCAAGCAACGGACAACCAGATCCATTCCCAAAAAATATTCTCGACTCTTCCACATCAAA
 
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rJMSF021C20+          ACAGTGTGTGCCCATGAATAAGCTCCCAGCTGCAGGACTAGCCAACGGGCACACTCCAGC
rJMSF020M02+          ACAGTGTGTGCCCATGAATAAGCTCCCAGCTGCAGGACTAGCCAACGGGCACACTCCAGC
rJMFF001A21+          ACAGTGTGTGCCCATGAATAAGCTCCCAGCTGCAGGACTAGCCAACGGGCACACTCCAGC
rJMFF016F07+          ACAGTGTGTGCCCATGAATAAGCTCCCAGCTGCAGGACTAGCCAACGGGCACACTCCAGC
                      ____________________________________________________________
consensus             ACAGTGTGTGCCCATGAATAAGCTCCCAGCTGCAGGACTAGCCAACGGGCACACTCCAGC
 
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rJMSF021C20+          AAAGGAACCCGAAACCAAGCCCCGAGCTGCGGGAATAGCCAATGGGCACAATCCAGCAAA
rJMSF020M02+          AAAGGAACCCGAAACCAAGCCCCGAGCTGCGGGAATAGCCAATGGGCACAATCCAGCAAA
rJMFF001A21+          AAAGGAACCCGAAACCAAGCCCCGAGCTGCGGGAATAGCCAATGGGCACAATCCAGCAAA
rJMFF016F07+          AAAGGAACCCGAAACCAAGCCCCGAGCTGCGGGAATAGCCAATGGGCACAATCCAGCAAA
                      ____________________________________________________________
consensus             AAAGGAACCCGAAACCAAGCCCCGAGCTGCGGGAATAGCCAATGGGCACAATCCAGCAAA
 
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rJMSF021C20+          GGAACCCGAAAGCAGTAAGGCGTCTCCTCGCAGAAATACTTCAGTTGGCAACCAGAGTTC
rJMSF020M02+          GGAACCCGAAAGCAGTAAGGCGTCTCCTCGCAGAAATACTTCAGTTGGCAACCAGAGTTC
rJMFF001A21+          GGAACCCGAAAGCAGTAAGGCGTCTCCTCGCAGAAATACTTCAGTTGGCAACCAGAGTTC
rJMFF016F07+          GGAACCCGAAAGCAGTAAGGCGTCTCCTCGCAGAAATACTTCAGTTGGCAACCAGAGTTC
                      ____________________________________________________________
consensus             GGAACCCGAAAGCAGTAAGGCGTCTCCTCGCAGAAATACTTCAGTTGGCAACCAGAGTTC
 
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rJMSF021C20+          GTCTAGCACTGACATGGTCGATCACACAAAAGCCACAGTGACTGTCGTAAAGAATCCATC
rJMSF020M02+          GTCTAGCACTGACATGGTCGATCACACAAAAGCCACAGTGACTGTCGTAAAGAATCCATC
rJMFF001A21+          GTCTAGCACTGACATGGTCGATCACACAAAAGCCACAGTGACTGTCGTAAAGAATCCATC
rJMFF016F07+          GTCTAGCACTGACATGGTCGATCACACAAAAGCCACAGTGACTGTCGTAAAGAATCCATC
                      ____________________________________________________________
consensus             GTCTAGCACTGACATGGTCGATCACACAAAAGCCACAGTGACTGTCGTAAAGAATCCATC
 
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rJMSF021C20+          TGGCAACATCATGGACGGTTTGATGCGTCGTTGGGACCTTAGCTTCTTCAAAAACAGGTG
rJMSF020M02+          TGGCAACATCATGGACGGTTTGATGCGTCGTTGGGACCTTAGCTTCTTCAAAAACAGGTG
rJMFF001A21+          TGGCAACATCATGGACGGTTTGATGCGTCGTTGGGACCTTAGCTTCTTCAAAAACAGGTG
rJMFF016F07+          TGGCAACATCATGGACGGTTTGATGCGTCGTTGGGACCTTAGCTTCTTCAAAAACAGGTG
                      ____________________________________________________________
consensus             TGGCAACATCATGGACGGTTTGATGCGTCGTTGGGACCTTAGCTTCTTCAAAAACAGGTG
 
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rJMSF021C20+          ATGTTGAACGTGGGAGAAGCGCCTCGTGAAAGCTGGTGGTATTGTATAGTTCAGCCATAT
rJMSF020M02+          ATGTTGAACGTGGGAGAAGCGCCTCGTGAAAGCTGGTGGTATTGTATAGTTCAGCCATAT
rJMFF001A21+          ATGTTGAACGTGGGAGAAGCGCCTCGTGAAAGCTGGTGGTATTGTATAGTTCAGCCATAT
rJMFF016F07+          ATGTTGAACGTGGGAGAAGCGCCTCGTGAAAGCTGGTGGTATTGTATAGTTCAGCCATAT
                      ____________________________________________________________
consensus             ATGTTGAACGTGGGAGAAGCGCCTCGTGAAAGCTGGTGGTATTGTATAGTTCAGCCATAT
 
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rJMSF021C20+          GAAAATTAAAAGCAAGCAAAATTTCAGGGTTGTGTATATTTTGGAAGACTTGGATCTGTA
rJMSF020M02+          GAAAATTAAAAGCAAGCAAAATTTCAGGGTTGTGTATATTTTGGAAGACTTGGATCTGTA
rJMFF001A21+          GAAAATTAAAAGCAAGCAAAATTTCAGGGTTGTGTATATTTTGGAAGACTTGGATCTGTA
rJMFF016F07+          GAAAATTAAAAGCAAGCAAAATTTCAGGGTTGTGTATATTTTGGAAGACTTGGATCTGTA
                      ____________________________________________________________
consensus             GAAAATTAAAAGCAAGCAAAATTTCAGGGTTGTGTATATTTTGGAAGACTTGGATCTGTA
 
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rJMSF021C20+          CTCTCCATAAAATATGATGGAGAAAGAAAGTAGGAGAAACAATACATTGGTCACTTGGTG
rJMSF020M02+          CTCTCCATAAAATATGATGGAGAAAGAAAGTAGGAGAAACAATACATTGGTCACTTGGTG
rJMFF001A21+          CTCTCCATAAAATATGATGGAGAAAGAAAGTAGGAGAAACAATACATTGGTCACTTGGTG
rJMFF016F07+          CTCTCCATAAAATATGATGGAGAAAGAAAGTAGGAGAAACAATACATTGGTCACTTGGTG
                      ____________________________________________________________
consensus             CTCTCCATAAAATATGATGGAGAAAGAAAGTAGGAGAAACAATACATTGGTCACTTGGTG
 
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rJMSF021C20+          CATGGGAATCAATATTGTTCTTGAGAGAGGAGAAAAGGGGAGGGAGACATTATTTGGTTG
rJMSF020M02+          CATGGGAATCAATATTGTTCTTGAGAGAGGAGAAAAGGGGAGGGAGACATTATTTGGTTG
rJMFF001A21+          CATGGGAATCAATATTGTTCTTGAGAGAGGAGAAAAGGGGAGGGAGACATTATTTGGTTG
rJMFF016F07+          CATGGGAATCAATATTGTTCTTGAGAGAGGAGAAAAGGGGAGGGAGACATTATTTGGTTG
                      ____________________________________________________________
consensus             CATGGGAATCAATATTGTTCTTGAGAGAGGAGAAAAGGGGAGGGAGACATTATTTGGTTG
 
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rJMSF021C20+          TAAAATATGGATTGATCAGAATTTGTTTGAC                             
rJMSF020M02+          TAAAATATGGATTGATCAGAATTTGTTTGAC                             
rJMFF001A21+          TAAAATATGGATTGATCAGAATTTGTTTGACTGAAAAGTATTCATGATGAACAATATAAA
rJMFF016F07+          TAAAATATGGATTGATCAGAATTTGTTTGACTGAAAAGTATTCATGATGAACAATATAAA
                      ____________________________________________________________
consensus             TAAAATATGGATTGATCAGAATTTGTTTGACTGAAAAGTATTCATGATGAACAATATAAA