Contig 005379:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015B14Sequence540005379 (3)ref|XP_006359148.1|96.7PREDICTED: uncharacterized protein LOC102594709 [Solanum tuberosum]591005379 (3)ref|XP_006359148.1|71.2PREDICTED: uncharacterized protein LOC102594709 [Solanum tuberosum]
JMFN037C02Sequence476005379 (3)ref|XP_006359148.1|96.7PREDICTED: uncharacterized protein LOC102594709 [Solanum tuberosum]

Alignment

This contig is upended


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JMFF015B14+                                                               GTACAATT
rJMFF015B14-                  AGTTTATGTAATCCACAACCACTGCACCTATAATACCTGCTACAGTACAATT
                      ____________________________________________________________
consensus                     AGTTTATGTAATCCACAACCACTGCACCTATAATACCTGCTACAGTACAATT
 
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JMFN037C02+                                                     AATTAAATCAGAAAACAT
JMFF015B14+           TTACAGATTAAATTTTCCCATAAATGAAAAAAAAAGTTTATAAATTAAATCAGAAAACAT
rJMFF015B14-          TTACAGATTAAATTTTCACATAAATGAAAAAAAAAGTTTATAAATTAAATCAGAAAACAT
                      ____________________________________________________________
consensus             TTACAGATTAAATTTTCCCATAAATGAAAAAAAAAGTTTATAAATTAAATCAGAAAACAT
 
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JMFN037C02+           AATCTATATATCAATCCAATTCAGCAGGAATTGAAGAACATAATGAAAAAAAAAAACCCT
JMFF015B14+           AATNTATATATCAATCCAATTCAGCAGGAATTGAAGAACATAATG-AAAAAAAAAACCCT
rJMFF015B14-          AATCTATATATCAATCCAATTCAGCAGGAATTGAAGAACATAATG-AAAAAAAAAACCCT
                      ____________________________________________________________
consensus             AATCTATATATCAATCCAATTCAGCAGGAATTGAAGAACATAATG-AAAAAAAAAACCCT
 
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JMFN037C02+           AAATCAGAGCAAGAATTAAGTCTTGCGTTCAAGCTCAGTACTATCGTCCTTGAAAGATGT
JMFF015B14+           AAATCAGAGCAAGAATTAAGTCTTGCGTTCAAGCTCAGTACTATCGTCCTTGAAAGATGT
rJMFF015B14-          AAATCANAGCAAGAATTAAGTCTTGCGTTCAAGCTCAGTACTATCGTCCTTGAAANATGT
                      ____________________________________________________________
consensus             AAATCAGAGCAAGAATTAAGTCTTGCGTTCAAGCTCAGTACTATCGTCCTTGAAAGATGT
 
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JMFN037C02+           GGATGATGATGATGAGGCGAAGTCCTTGGGAGGAATAGGATAATAGGGCTCGCCGGCGGC
JMFF015B14+           GGATGATGATGATGAGGCGAAGTCCTTGGGAGGAATAGGATAATAGGGCTCGCCGGCGGC
rJMFF015B14-          GGATGATGATGATGAGGCGAAGTCCTTGGGAGGAATAGGATAATAGGGCTCGCCGGCGGC
                      ____________________________________________________________
consensus             GGATGATGATGATGAGGCGAAGTCCTTGGGAGGAATAGGATAATAGGGCTCGCCGGCGGC
 
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JMFN037C02+           GGGCAAGTCGGCGAGCGCCGCCATCATGCGGCGGATGCTGAGAGTGCGCGCCCTCTTGAA
JMFF015B14+           GGGCAAGTCGGCGAGCGCCGCCATCATGCGGCGGATGCTGAGAGTGCGCGCCCTCTTGAA
rJMFF015B14-          GGGCAAGTCGGCGAGCGCCGCCATCATGCGGCGGATGCTGANAGTGCNCNCCCTCTTGAA
                      ____________________________________________________________
consensus             GGGCAAGTCGGCGAGCGCCGCCATCATGCGGCGGATGCTGAGAGTGCGCGCCCTCTTGAA
 
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JMFN037C02+           GCTGAAGGATCTCGGCGGCGGCGCGTTGGAGAAGACGGCGGAAGACTTGGATAGGATGAA
JMFF015B14+           GCTGAAGGATCTCGGCGGCGGCGCGTTGGAGAAGACGGCGGAAGACTTGGATAGGATGAA
rJMFF015B14-          GCTGAAGGATCTCGGCGGCGGCNCGTTGGAAAAAACGGCGGAANACTTGGATAGGATGAA
                      ____________________________________________________________
consensus             GCTGAAGGATCTCGGCGGCGGCGCGTTGGAGAAGACGGCGGAAGACTTGGATAGGATGAA
 
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JMFN037C02+           GTAAACCAGAGCTTGAACTAGGAGGAAGAGCCCCACCTTCACCAACATGTCTTCGTCAAA
JMFF015B14+           GTAAACCAGAGCTTGAACTAGGAGGAAGAGCCCCACCTTCACCAACATGTCTTCGTCAAA
rJMFF015B14-          GTAAACCANAGCTTGAACTAGGAGGAANAGCCCCACCTTCACCAACATGTCTTCGTCAAA
                      ____________________________________________________________
consensus             GTAAACCAGAGCTTGAACTAGGAGGAAGAGCCCCACCTTCACCAACATGTCTTCGTCAAA
 
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JMFN037C02+           CTCCATTTTTCTATTGATTTCTGAGAAATAAAATAAAATCGAGAAAAAATATTGAGAGGT
JMFF015B14+           CTCCATTTTTCTATTGATTTCTGAGAAATAAAATAAAATCGAGAAAAAATATTGAGAGGT
rJMFF015B14-          CTCCATTTTTCTATTGATTTCTGANAAATAAAATAAAATCGANAAAAAATATTGAGAGGT
                      ____________________________________________________________
consensus             CTCCATTTTTCTATTGATTTCTGAGAAATAAAATAAAATCGAGAAAAAATATTGAGAGGT
 
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JMFN037C02+           TGTGATTGAATTGGAACACCAAAAGATGATGATGAGGA                      
JMFF015B14+           TGTGATTGAATTGGAACACCAAAAGATGATGATGAGGATTGAGGATGAAGGAT       
rJMFF015B14-          TGTGATTGAATTGGAACNCCAAAAGATGATGATGAGGATTGAGGATGAAGGATCGGTTCT
                      ____________________________________________________________
consensus             TGTGATTGAATTGGAACACCAAAAGATGATGATGAGGATTGAGGATGAAGGATCGGTTCT