Contig 005374:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A07Sequence411004512 (5)ref|XP_010649491.1|8e-51PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X2 [Vitis vinifera718005374 (5)gb|KJB34730.1|2e-86hypothetical protein B456_006G080700 [Gossypium raimondii]
JMFF013N11Sequence575004512 (5)ref|XP_009779748.1|1e-77PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv710005374 (5)gb|KJB34731.1|8e-64hypothetical protein B456_006G080700 [Gossypium raimondii]
JMFF023P22Sequence479004512 (5)ref|XP_009779748.1|1e-58PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv694005374 (5)gb|KHF99088.1|1e-82Beta-glucosidase-like SFR2, chloroplastic [Gossypium arboreum]
JMFF026G08Sequence574004512 (5)ref|XP_009779748.1|2e-77PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv689005374 (5)gb|KJB34730.1|2e-68hypothetical protein B456_006G080700 [Gossypium raimondii]
JMFF040G22Sequence572004512 (5)ref|XP_009779748.1|2e-77PREDICTED: beta-glucosidase-like SFR2, chloroplastic isoform X1 [Nicotiana sylv703005374 (5)gb|KJB34731.1|1e-64hypothetical protein B456_006G080700 [Gossypium raimondii]

Alignment

This contig is upended


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rJMFF012A07+                                                  AGTTTTTGCGGCCACTCTAG
                      ____________________________________________________________
consensus                                                     AGTTTTTGCGGCCACTCTAG
 
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rJMFF026G08+                                        GGACAATTTCTGATAACTGGGAGTGGGCTG
rJMFF023P22+                                        GGACAATTTCTGATAACTGGGAGTGGGCTG
rJMFF012A07+          CAGGTGTCCCAATACTTGGTTACTTGTTTTGGACAATTTCTGATAACTGGGAGTGGGCTG
                      ____________________________________________________________
consensus             CAGGTGTCCCAATACTTGGTTACTTGTTTTGGACAATTTCTGATAACTGGGAGTGGGCTG
 
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rJMFF026G08+          ATGGGCTATGGTCCGAAATTTGGACTTGTAGCAGTTGACCGTTCCAACAACCTTGCCAGG
rJMFF023P22+          AT-GGCTATGGTCCGAAATTTGGACTTGTAGCAGTTGACCGTTCCAACAACCTTGCCAGG
rJMFF012A07+          AT-GGCTATGGTCCGAAATTTGGACTTGTAGCAGTTGACCGTTCCAACAACCTTGCCAGG
rJMFF040G22+                  TGGTCCGAAATTTGGACTTGTAGCAGTTGACCGTTCCAACANCCTTGCCAGG
rJMFF013N11+                    GTCCGAAATTNGGACTTGTAGCAGTTGACCGTTCCAACANCCTTGCCAGG
                      ____________________________________________________________
consensus             AT-GGCTATGGTCCGAAATTTGGACTTGTAGCAGTTGACCGTTCCAACAACCTTGCCAGG
 
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rJMFF026G08+          ATTCCACGCCCTTCATACCATCTGTTTTCCAAGGTTGTCACATCAGGTAAAATCACACGG
rJMFF023P22+          ATTCCACGCCCTTCATACCATCTGTTTTCCAAGGTTGTCACATCAGGTAAAATCACACGG
rJMFF012A07+          ATTCCACGCCCTTCATACCATCTGTTTTCCAAGGTTGTCACATCAGGTAAAATCACACGG
rJMFF040G22+          ATTCCACGCCNTTCATACCATCTGTTTTCCAAGGTTGTCACATCAGGTAAAATCACACGG
rJMFF013N11+          ATTCCACGCCCTTCATACCATCTGTTTTCCAAGGTTGTCACATCAGGTAAAATCACACGG
                      ____________________________________________________________
consensus             ATTCCACGCCCTTCATACCATCTGTTTTCCAAGGTTGTCACATCAGGTAAAATCACACGG
 
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rJMFF026G08+          CAGGATAGAGAGAATGCTTGGAATGAACTTCAAATTGCAGTAAAAGAGAAAAAAACAAGA
rJMFF023P22+          CAGGATAGAGAGAATGCTTGGAATGAACTTCAAATTGCAGTAAAAGAGAAAAAAACAAGA
rJMFF012A07+          CAGGATAGAGAGAATGCTTGGAATGANCTTCAAATTGCAGTAAAAGAGAAAAAAACAAGA
rJMFF040G22+          CAGGATAGAGAGAATGCTTGGAATGAACTTCAAATTGCAGTAAAAGAGAAAAAAACAAGA
rJMFF013N11+          CAGGATAGAGAGAATGCTTGGAATGAACTTCAAATTGCAGTAAAAGAGAAAAAAACAAGA
                      ____________________________________________________________
consensus             CAGGATAGAGAGAATGCTTGGAATGAACTTCAAATTGCAGTAAAAGAGAAAAAAACAAGA
 
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rJMFF026G08+          CCATTTTATCGCTCTGTGAACAAACATGGTTTAATGTATGCAGGAGGTCTTGATGAGCCT
rJMFF023P22+          CCATTTTATCGCTCTGTGAACAAACATGGTTTAATGTATGCAGGAGGTCTTGATGAGCCT
rJMFF012A07+          CCATTTTATCGCTCTGTGAACAAACATGGTTTAATGTATGCAGGAGGTCTTGATGAGCCT
rJMFF040G22+          CCATTTTATCGCTCTGTGAACAAACATGGTTTAATGTATGCAGGAGGTCTTGATGAGCCT
rJMFF013N11+          CCATTTTATCGCTCTGTGAACAAACATGGTTTAATGTATGCAGGAGGTCTTGATGAGCCT
                      ____________________________________________________________
consensus             CCATTTTATCGCTCTGTGAACAAACATGGTTTAATGTATGCAGGAGGTCTTGATGAGCCT
 
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rJMFF026G08+          ATATGGCGACCATATATTGAACGTGATTGGCGGTTTGGACACTATGAAATGGAAGGTCTA
rJMFF023P22+          ATATGGCGACCATATATTGAACGTGATTGGCGGTTTGGACACTATGAAATGGAAGGTCTA
rJMFF012A07+          ATATGGCGACCATATATTGAACGTGATTGGCGGTTTGGACACTATGAAATGGAAGGTCTA
rJMFF040G22+          ATATGGCGACCATATATTGAACGTGATTGGCGGTTTGGACACTATGAAATGGAAGGTCTA
rJMFF013N11+          ATATGGCGACCATATATTGAACGTGATTGGCGGTTTGGACACTATGAAATGGAAGGTCTA
                      ____________________________________________________________
consensus             ATATGGCGACCATATATTGAACGTGATTGGCGGTTTGGACACTATGAAATGGAAGGTCTA
 
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rJMFF026G08+          CAAGATCCATTGAGCCGAATTTCACGATTCATTCTCCGGCCCTTCTCCATCAAGAAGAAA
rJMFF023P22+          CAAGATCCATTGAGCCGAATTTCACGATTCATTCTCCGGCCCTTCTCCATCAAGAAGAAA
rJMFF012A07+          CAAGATCCATTGAGCCGAATTTCACGATTCATTCTCCGGCCCTTCTCCATCAAGAAGAAA
rJMFF040G22+          CAAGATCCATTGAGCCGAATTTCACGATTCATTCTCCGGCCCTTCTCCATCAAGAAGAAA
rJMFF013N11+          CAAGATCCATTGAGCCGAATTTCACGATTCATTCTCCGGCCCTTCTCCATCAAGAAGAAA
                      ____________________________________________________________
consensus             CAAGATCCATTGAGCCGAATTTCACGATTCATTCTCCGGCCCTTCTCCATCAAGAAGAAA
 
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rJMFF026G08+          TCTAAATCCAAGACAGTGAATGAGGAAGCCAGTCTTGAGCCTCTAATGCAGAGCCTTTGA
rJMFF023P22+          TCTAAATCCAAGACAGTGAATGAGGAAGCCAGTCTTGAGCCTCTAATGCAGAGCCTTTGA
rJMFF012A07+          TCTAAATCCAAGACAGTGAATGAGGAAGCCAGTCTTGAGCCTCTAATGCAGAGCCTTTGA
rJMFF040G22+          TNTAAATCCAAGACAGTGAATGAGGAAGCCAGTCTTGAGCCTCTAATGCAGAGCCTTTGA
rJMFF013N11+          TNTAAATCCAAGACAGTGAATGAGGAAGCCAGTCTTGAGCCTCTAATGCAGAGCCTTTGA
                      ____________________________________________________________
consensus             TCTAAATCCAAGACAGTGAATGAGGAAGCCAGTCTTGAGCCTCTAATGCAGAGCCTTTGA
 
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rJMFF026G08+          TGCTCCTGCAAGAAATTATTGTGAAAATTCCATCAAATTTCTTCCGGTGAAGTTGGAGCA
rJMFF023P22+          TGCTCCTGCAAGAAATTATTGTGAAAATTCCATCAAATTTCTTCCGGTGAAGTTGGAGCA
rJMFF012A07+          TGCTCCTGCAAGAAATTATTGTGAAAATTCCATCAAATTTCTTCCGGTGAAGTTGGAGCA
rJMFF040G22+          TGCTCCTGCAAGAAATTATTGTGAAAATTCCATCAAATTTCTTCCGGTGAAGTTGGAGCA
rJMFF013N11+          TGCTCCTGCAAGAAATTATTGTGAAAATTCCATCAAATTTCTTCCGGTGAAGTTGGAGCA
                      ____________________________________________________________
consensus             TGCTCCTGCAAGAAATTATTGTGAAAATTCCATCAAATTTCTTCCGGTGAAGTTGGAGCA
 
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rJMFF026G08+          AG                                                          
rJMFF023P22+          AG                                                          
rJMFF012A07+          AG                                                          
rJMFF040G22+          AGTCACTGCTGGAAAGATGTGGTTCAAGATATAGTCAGAGATGTCCCTGGATGGAGGGGT
rJMFF013N11+          AGTCACTGCTGGAAAGATGTGGTTCAAGATATAGTCAGAGATGTCCCTGGATGGAGGGGT
                      ____________________________________________________________
consensus             AGTCACTGCTGGAAAGATGTGGTTCAAGATATAGTCAGAGATGTCCCTGGATGGAGGGGT
 
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rJMFF040G22+          AACATGGTGATATTCATATTCTGTCAGATTGTATATAGCTTTGAAGTGCGAGTATCAACT
rJMFF013N11+          AACATGGTGATATTCATATTCTGTCAGATTGTATATAGCTTTGAAGTGCGAGTATCAACT
                      ____________________________________________________________
consensus             AACATGGTGATATTCATATTCTGTCAGATTGTATATAGCTTTGAAGTGCGAGTATCAACT
 
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rJMFF040G22+          CTGTATCTTGCATTGTTATTCGGCATCAGAAAAAATCAACTGTAATTTACTCGCGGATTG
rJMFF013N11+          CTGTATCTTGCATTGTTATTCGGCATCAGAAAAAATCAACTGTAATTTACTCGCGGATTG
                      ____________________________________________________________
consensus             CTGTATCTTGCATTGTTATTCGGCATCAGAAAAAATCAACTGTAATTTACTCGCGGATTG
 
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rJMFF040G22+          ATGGATCGTCTATTCAACGCTGTAACATNTAATGCTTACTTATATCCGGAA         
rJMFF013N11+          ATGGATCGTCTATTCAACGCTGTAACATCTAATGCTTACTTATATCCGGAAAGTGTGACA
                      ____________________________________________________________
consensus             ATGGATCGTCTATTCAACGCTGTAACATCTAATGCTTACTTATATCCGGAAAGTGTGACA