clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007A05 | Sequence | 605 | 005373 (20) | gb|AFW71933.1| | 3e-91 | histone H3, partial [Zea mays] | 583 | 005373 (20) | gb|AFW71933.1| | 2e-91 | histone H3, partial [Zea mays] |
JMFF013L09 | Sequence | 574 | 005373 (20) | gb|AFW71933.1| | 2e-91 | histone H3, partial [Zea mays] | 601 | 005373 (20) | gb|AFW71933.1| | 3e-91 | histone H3, partial [Zea mays] |
JMFN004G22 | Sequence | 577 | 005373 (20) | tpg|DAA45649.1| | 2e-91 | TPA: histone H3 [Zea mays] | |||||
JMFN005P11 | Sequence | 606 | 005373 (20) | gb|AFW71933.1| | 3e-91 | histone H3, partial [Zea mays] | |||||
JMFN007N17 | Sequence | 490 | 005373 (20) | gb|AFW71933.1| | 3e-92 | histone H3, partial [Zea mays] | |||||
JMFN009F02 | Sequence | 612 | 005373 (20) | gb|AFW71933.1| | 3e-91 | histone H3, partial [Zea mays] | |||||
JMFN010N10 | Sequence | 621 | 005373 (20) | gb|AFW71933.1| | 3e-91 | histone H3, partial [Zea mays] | |||||
JMFN012A09 | Sequence | 600 | 005373 (20) | gb|AFW71933.1| | 2e-91 | histone H3, partial [Zea mays] | |||||
JMFN014D04 | Sequence | 607 | 005373 (20) | gb|AFW71933.1| | 3e-91 | histone H3, partial [Zea mays] | |||||
JMFN018A11 | Sequence | 571 | 005373 (20) | gb|AFW71933.1| | 2e-91 | histone H3, partial [Zea mays] | |||||
JMFN028L03 | Sequence | 544 | 005373 (20) | gb|AFW71933.1| | 1e-91 | histone H3, partial [Zea mays] | |||||
JMFN031F14 | Sequence | 584 | 005373 (20) | gb|AFW71933.1| | 2e-91 | histone H3, partial [Zea mays] | |||||
JMFN035G01 | Sequence | 529 | 005373 (20) | tpg|DAA45649.1| | 1e-91 | TPA: histone H3 [Zea mays] | |||||
JMFN037F21 | Sequence | 463 | 005373 (20) | gb|AFW71933.1| | 1e-91 | histone H3, partial [Zea mays] | |||||
JMFN041H19 | Sequence | 529 | 005373 (20) | gb|AFW71933.1| | 7e-92 | histone H3, partial [Zea mays] | |||||
JMFN042D07 | Sequence | 593 | 005373 (20) | gb|AFW71933.1| | 2e-91 | histone H3, partial [Zea mays] | |||||
JMSF039N12 | Sequence | 639 | 005373 (20) | gb|AFW71933.1| | 4e-91 | histone H3, partial [Zea mays] | 587 | 005373 (20) | gb|AFW71933.1| | 2e-91 | histone H3, partial [Zea mays] |
This contig is upended
. : . : . : . : . : . :
JMFN028L03+ CGGAAATAAAGCACTTGCATTACTGAAGCAACAAGANAGTCATGG
JMFN014D04+ CGGAAATAAAGCACTTGCATTACTGAAGCAACAAGAAAGTCATGG
JMFN005P11+ CGGAAATAAAGCACTTGCATTACTGAAGCAACAAGAAAGTCATGG
JMFN004G22+ CGGAAATAAAGCACTTGCATTACTGAAGCAACAAGAAAGTCATGG
JMFN009F02+ CGGAAATAAAGCACTTGCATTACTGAAGCAACAAGAAAGTCATGG
JMFN042D07+ TTGCATTACTGAAGCAACAAGAAAGTCATGG
JMFN018A11+ ACTGAAGCAACAAGAAAGTCATGG
JMFN041H19+ GAAGCAACAAGAAAGTCATGG
JMFN012A09+ CTTGCATTACTGAAGCAACAAGAAAGTCATGG
JMFF007A05+ TGAAGCAACAAGAAAGTCATGG
rJMSF039N12- TGG
____________________________________________________________
consensus CGGAAATAAAGCACTTGCATTACTGAAGCAACAAGAAAGTCATGG
. : . : . : . : . : . :
JMFN028L03+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN014D04+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN005P11+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN004G22+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN009F02+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN042D07+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN018A11+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN035G01+ CTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN041H19+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN037F21+ T
JMFN012A09+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFN007N17+ CTAGCTAAACAATTTTACATTTTA
rJMFF007A05- TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFF013L09+ ATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
JMFF007A05+ TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
rJMSF039N12- TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
rJMFF013L09- ATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
____________________________________________________________
consensus TTTCTATAAATCAAGAAAATATTTGTTTCTAGGCTTCTAGCTAAACAATTTTACATTTTA
. : . : . : . : . : . :
JMFN028L03+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN014D04+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN005P11+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN004G22+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN009F02+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN042D07+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN018A11+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN035G01+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN041H19+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN037F21+ AAGGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN012A09+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFN007N17+ AGGGGAAAGTATAAAAGAGATTTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
rJMFF007A05- A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFF013L09+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMFF007A05+ A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
rJMSF039N12- A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
JMSF039N12+ CTCCTGGCGAGCTGAAT
JMFN031F14+ CTCCTGGCGAGCTGAAT
JMFN010N10+ CTCCTGGCGAGCTGAAT
rJMFF013L09- A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
____________________________________________________________
consensus A-GGGAAAGTATAAAAGAGATCTAAGCTCTCTCCCCTCTGATTCTCCTGGCGAGCTGAAT
. : . : . : . : . : . :
JMFN028L03+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN014D04+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN005P11+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN004G22+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN009F02+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN042D07+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN018A11+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN035G01+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN041H19+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN037F21+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN012A09+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN007N17+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
rJMFF007A05- GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFF013L09+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFF007A05+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
rJMSF039N12- GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMSF039N12+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN031F14+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
JMFN010N10+ GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
rJMFF013L09- GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
____________________________________________________________
consensus GTCCTTGGGCATGATGGTGACACGCTTGGCATGAATGGCGCACAGGTTAGTGTCCTCAAA
. : . : . : . : . : . :
JMFN028L03+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN014D04+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN005P11+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN004G22+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN009F02+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN042D07+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN018A11+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN035G01+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN041H19+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN037F21+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN012A09+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN007N17+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
rJMFF007A05- CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFF013L09+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFF007A05+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
rJMSF039N12- CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMSF039N12+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN031F14+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
JMFN010N10+ CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
rJMFF013L09- CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
____________________________________________________________
consensus CAGCCCAACAAGGTAAGCCTCGGCCGCCTCCTGCAATGCCAACACAGCGTGGCTCTGGAA
. : . : . : . : . : . :
JMFN028L03+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN014D04+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN005P11+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN004G22+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN009F02+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN042D07+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN018A11+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN035G01+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN041H19+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN037F21+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN012A09+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN007N17+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
rJMFF007A05- ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFF013L09+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFF007A05+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
rJMSF039N12- ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMSF039N12+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN031F14+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
JMFN010N10+ ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
rJMFF013L09- ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
____________________________________________________________
consensus ACGCAGATCAGTCTTGAAATCCTGGGCAATTTCACGGACAAGCCTCTGGAATGGCAGCTT
. : . : . : . : . : . :
JMFN028L03+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN014D04+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN005P11+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN004G22+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN009F02+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN042D07+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN018A11+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN035G01+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN041H19+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN037F21+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN012A09+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN007N17+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
rJMFF007A05- CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFF013L09+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFF007A05+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
rJMSF039N12- CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMSF039N12+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN031F14+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
JMFN010N10+ CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
rJMFF013L09- CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
____________________________________________________________
consensus CCTGATAAGGAGCTCAGTGCTCTTCTGGTATTTGCGGATTTCACGAAGAGCAACGGTTCC
. : . : . : . : . : . :
JMFN028L03+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN014D04+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN005P11+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN004G22+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN009F02+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN042D07+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN018A11+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN035G01+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN041H19+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN037F21+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN012A09+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN007N17+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
rJMFF007A05- AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFF013L09+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFF007A05+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
rJMSF039N12- AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMSF039N12+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN031F14+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
JMFN010N10+ AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
rJMFF013L09- AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
____________________________________________________________
consensus AGGCCTGTATCGGTGAGGCTTCTTCACTCCCCCAGTAGTTGGGGCGGACTTTCGGGCAGC
. : . : . : . : . : . :
JMFN028L03+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN014D04+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN005P11+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN004G22+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN009F02+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN042D07+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN018A11+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN035G01+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN041H19+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN037F21+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN012A09+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN007N17+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
rJMFF007A05- CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFF013L09+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFF007A05+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
rJMSF039N12- CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMSF039N12+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN031F14+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
JMFN010N10+ CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
rJMFF013L09- CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
____________________________________________________________
consensus CTTGGTGGCAAGTTGCTTCCTCGGAGCCTTGCCTCCGGTTGACTTGCGAGCAGTTTGCTT
. : . : . : . : . : . :
JMFN028L03+ GGTACGGGCCATCACTGCGA
JMFN014D04+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFN005P11+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFN004G22+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAA
JMFN009F02+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFN042D07+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFN018A11+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFN035G01+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAA
JMFN041H19+ GGTACGGGCCATCACTGCGATGAAACTTG
JMFN037F21+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAG
JMFN012A09+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFN007N17+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGA
rJMFF007A05- GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFF013L09+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFF007A05+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
rJMSF039N12- GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMSF039N12+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
JMFN031F14+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAG
JMFN010N10+ GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
rJMFF013L09- GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
____________________________________________________________
consensus GGTACGGGCCATCACTGCGATGAAACTTGGGTCAAGTACTAGAAGAGATGGAATCTATCG
. : . : . : . : . : . :
JMFN014D04+ GCGAAGAATGAATGACAAGGCGG
JMFN005P11+ GCGAAGAATGAATGACAAGGCG
JMFN009F02+ GCGAAGAATGAATGACAAGGCGGCTTTC
JMFN042D07+ GCGAAGAATGAATGACAAGGCGG
JMFN018A11+ GCGAAGAA
JMFN012A09+ GCGAAGAATGAATGACAAGGCGGCTTTCG
rJMFF007A05- GCGAAGAATGAATGACAAGGCGGCTTTCGCTTTTGTGGTGTGG
JMFF013L09+ GCGAAGAATGAATGACAAGGCGGCTTTCGCTTTTGTGGTGTGG
JMFF007A05+ GCGAAGAATGAATGACAAGGCGGCTTTCGCTTTTGTGGTGTGG
rJMSF039N12- GCGAAGAATGAATGACAAGGCGGCTTTCGCTTTTGTGGTGTGG
JMSF039N12+ GCGAAGAATGAATGACAAGGCGGCTTTCGCTTTTGTGGTGTGG
JMFN010N10+ GCGAAGAATGAATGACAAGGCGGC
rJMFF013L09- GCGAAGAATGAATGACAAGGCGGCTTTCGCTTTTGTGGGTGTGGTCGGTTCTCGACGAAT
____________________________________________________________
consensus GCGAAGAATGAATGACAAGGCGGCTTTCGCTTTTGTGGTGTGGGTCGGTTCTCGACGAAT