Contig 005370:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012L14Sequence405003913 (7)ref|XP_006339100.1|2e-10PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube770005370 (6)gb|EYU41567.1|2e-72hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata]
JMFF026K13Sequence538003913 (7)ref|XP_006339100.1|3e-37PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube786005370 (6)gb|EYU41567.1|2e-77hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata]
JMSF013C17Sequence442003913 (7)ref|XP_006339100.1|6e-15PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube758005370 (6)ref|XP_009593672.1|4e-88PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento
JMSF013P20Sequence253003913 (7)789005370 (6)ref|XP_009593672.1|9e-101PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento
JMSF051I15Sequence662003913 (7)ref|XP_006339100.1|5e-63PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube724005370 (6)gb|EYU41567.1|4e-79hypothetical protein MIMGU_mgv1a003249mg [Erythranthe guttata]
JMSF053M05Sequence661003913 (7)ref|XP_006339100.1|5e-63PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum tube869005370 (6)ref|XP_009593672.1|6e-118PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF053M05+ GAGCTGAAGCATACTGCAAGT
                      ____________________________________________________________
consensus GAGCTGAAGCATACTGCAAGT
 
. : . : . : . : . : . :
rJMSF013P20+ ACATGNACTTTG
rJMSF053M05+ ATTACAACCTCAAGGATGAAAATATAGTAGTAATAACCAGTGGAGCTAACATGAACTTTG
                      ____________________________________________________________
consensus ATTACAACCTCAAGGATGAAAATATAGTAGTAATAACCAGTGGAGCTAACATGAACTTTG
 
. : . : . : . : . : . :
rJMSF013P20+ ATAGANTAAGANTGGTAACTGNACTAGCAGATGTTGGTAGAAAACGTGAAGCTGTTCTTT
rJMSF053M05+ ATAGACTAAGATTGGTAACTGAACTAGCAGATGTTGGTAGAAAACGTGAAGCTGTTCTTT
                      ____________________________________________________________
consensus ATAGACTAAGATTGGTAACTGAACTAGCAGATGTTGGTAGAAAACGTGAAGCTGTTCTTT
 
. : . : . : . : . : . :
rJMSF013P20+ CAACCAATTTGCCTGAAGAGCCAGGGAGTTTCAAGAAATTTGTTGAACTTGTGGGGCCCA
rJMSF053M05+ CAACCAATTTGCCTGAAGAGCCAGGGAGTTTCAAGAAATTTGTTGAACTTGTGGGGCCCA
rJMSF013C17+ AACCAATTTGCCTGAAGAGCCAGGGAGTTTCAAGAAATTTGTTGAACTTGTGGGGCCCA
rJMSF051I15+ AACTTGTGGGGCCCA
rJMFF026K13+ GGGCCCA
                      ____________________________________________________________
consensus CAACCAATTTGCCTGAAGAGCCAGGGAGTTTCAAGAAATTTGTTGAACTTGTGGGGCCCA
 
. : . : . : . : . : . :
rJMSF013P20+ TGAACATTACTGAATTCAGATACAGATACAGTTCTGGTCAAGGACAAACTCTGGTACTAT
rJMSF053M05+ TGAACATTACTGAATTCAGATACAGATACAGTTCTGGTCAAGGACAAACTCTGGTACTAT
rJMSF013C17+ TGAACATTACTGAATTCAGATACAGATACAGTTCTGGTCAAGGACAAACTCTGGTACTAT
rJMSF051I15+ TGAACATTACTGAATTCAGATACAGATACAGTTCTGGTCAAGGACAAACTCTGGTACTAT
rJMFF026K13+ TGAACATTACTGAATTCAGATACAGATACAGTTCTGGTCAAGGACAAACTCTGGTACTAT
rJMFF012L14+ TGAATTCAGATACAGATACAGTTCTGGTCAAGGACAAACTCTGGTACTAT
                      ____________________________________________________________
consensus TGAACATTACTGAATTCAGATACAGATACAGTTCTGGTCAAGGACAAACTCTGGTACTAT
 
. : . : . : . : . : . :
rJMSF013P20+ ACAGTGTTGGTGTTCATACAAAAATGGAACTTGATGCAATGGTGGAGAGGATGACACTCT
rJMSF053M05+ ACAGTGTTGGTGTTCATACAAAAATGGAACTTGATGCAATGGTGGAGAGGATGACACTCT
rJMSF013C17+ ACAGTGTTGGTGTTCATACAAAAATGGAACTTGATGCAATGGTGGAGAGGATGACACTCT
rJMSF051I15+ ACAGTGTTGGTGTTCATACAAAAATGGAACTTGATGCAATGGTGGAGAGGATGACACTCT
rJMFF026K13+ ACAGTGTTGGTGTTCATACAAAAATGGAACTTGATGCAATGGTGGAGAGGATGACACTCT
rJMFF012L14+ ACAGTGTTGGTGTTCATACAAAAATGGAACTTGATGCAATGGTGGAGAGGATGACACTCT
                      ____________________________________________________________
consensus ACAGTGTTGGTGTTCATACAAAAATGGAACTTGATGCAATGGTGGAGAGGATGACACTCT
 
. : . : . : . : . : . :
rJMSF013P20+ CTCAATTACATACCATTGATCTGACAGATAATGACCTTGTCAAAGATCATCTACGCCATT
rJMSF053M05+ CTCAATTACATACCATTGATCTGACAGATAATGACCTTGTCAAAGATCATCTACGCCATT
rJMSF013C17+ CTCAATTACATACCATTGATCTGACAGATAATGACCTTGTCAAAGATCATCTACGCCATT
rJMSF051I15+ CTCAATTACATACCATTGATCTGACAGATAATGACCTTGTCAAAGATCATCTACGCCATT
rJMFF026K13+ CTCAATTACATACCATTGATCTGACAGATAATGACCTTGTCAAAGATCATCTACGCCATT
rJMFF012L14+ CTCAATTACATACCATTGATCTGACAGATAATGACCTTGTCAAAGATCATCTACGCCATT
                      ____________________________________________________________
consensus CTCAATTACATACCATTGATCTGACAGATAATGACCTTGTCAAAGATCATCTACGCCATT
 
. : . : . : . : . : . :
rJMSF013P20+ TGATTGGTGGCCGATCTAGTGTACAAGATGAACTTCTTTGCCGGTTTGTTTTCCCAGAGA
rJMSF053M05+ TGATTGGTGGCCGATCTAGTGTACAAGATGAACTTCTTTGCCGGTTTGTTTTCCCAGAGA
rJMSF013C17+ TGATTGGTGGCCGATCTAGTGTACAAGATGAACTTCTTTGCCGGTTTGTTTTCCCAGAGA
rJMSF051I15+ TGATTGGTGGCCGATCTAGTGTACAAGATGAACTTCTTTGCCGGTTTGTTTTCCCAGAGA
rJMFF026K13+ TGATTGGTGGCCGATCTAGTGTACAAGATGAACTTCTTTGCCGGTTTGTTTTCCCAGAGA
rJMFF012L14+ TGATTGGTGGCCGATCTAGTGTACAAGATGAACTTCTTTGCCGGTTTGTTTTCCCAGAGA
                      ____________________________________________________________
consensus TGATTGGTGGCCGATCTAGTGTACAAGATGAACTTCTTTGCCGGTTTGTTTTCCCAGAGA
 
. : . : . : . : . : . :
rJMSF013P20+ GGCCTGGTGCCCTAATGAAATTTTTAGACGCTTTCAGCCCACGATGGAATATAACTTTGT
rJMSF053M05+ GGCCTGGTGCCCTAATGAAATTTTTAGACGCTTTCAGCCCACGATGGAATATAACTTTGT
rJMSF013C17+ GGCCTGGTGCCCTAATGAAATTTTTAGACGCTTTCAGCCCACGATGGAATATAACTTTGT
rJMSF051I15+ GGCCTGGTGCCCTAATGAAATTTTTAGACGCTTTCAGCCCACGATGGAATATAACTTTGT
rJMFF026K13+ GGCCTGGTGCCCTAATGAAATTTTTAGACGCTTTCAGCCCACGATGGAATATAACTTTGT
rJMFF012L14+ GGCCTGGTGCCCTAATGAAATTTTTAGACGCTTTCAGCCCACGATGGAATATAACTTTGT
                      ____________________________________________________________
consensus GGCCTGGTGCCCTAATGAAATTTTTAGACGCTTTCAGCCCACGATGGAATATAACTTTGT
 
. : . : . : . : . : . :
rJMSF013P20+ TCCATTACCGTTCACAGGGAGAAGCTGGTGCAAATGTGTTGGTTGGTCTTCAAGTTGCCA
rJMSF053M05+ TCCATTACCGTTCACAGGGAGAAGCTGGTGCAAATGTGTTGGTTGGTCTTCAAGTTGCCA
rJMSF013C17+ TCCATTACCGTTCACAGGGAGAAGCTGGTGCAAATGTGTTGGTTGGTCTTCAAGTTGCCA
rJMSF051I15+ TCCATTACCGTTCACAGGGAGAAGCTGGTGCAAATGTGTTGGTTGGTCTTCAAGTTGCCA
rJMFF026K13+ TCCATTACCGTTCACAGGGAGAAGCTGGTGCAAATGTGTTGGTTGGTCTTCAAGTTGCCA
rJMFF012L14+ TCCATTACCGTTCACAGGGAGAAGCTGGTGCAAATGTGTTGGTTGGTCTTCAAGTTGCCA
                      ____________________________________________________________
consensus TCCATTACCGTTCACAGGGAGAAGCTGGTGCAAATGTGTTGGTTGGTCTTCAAGTTGCCA
 
. : . : . : . : . : . :
rJMSF013P20+ GCAACGAGATAGATGAGTTTAAGCAACGAGCCAACAATCTGGGTTTTGAGTATGCTGTGG
rJMSF053M05+ GCAACGAGATAGATGAGTTTAAGCAACGAGCCAACAATCTGGGTTTTGAGTATGCTGTGG
rJMSF013C17+ GCAACGAGATAGATGAGTTTAAGCAACGAGCCAACAATCTGGGTTTTGAGTATGCTGTGG
rJMSF051I15+ GCAACGAGATAGATGAGTTTAAGCAACGAGCCAACAATCTGGGTTTTGAGTATGCTGTGG
rJMFF026K13+ GCAACGAGATAGATGAGTTTAAGCAACGAGCCAACAATCTGGGTTTTGAGTATGCTGTGG
rJMFF012L14+ GCAACGAGATAGATGAGTTTAAGCAACGAGCCAACAATCTGGGTTTTGAGTATGCTGTGG
                      ____________________________________________________________
consensus GCAACGAGATAGATGAGTTTAAGCAACGAGCCAACAATCTGGGTTTTGAGTATGCTGTGG
 
. : . : . : . : . : . :
rJMSF013P20+ AAACCTGTAACGAGGCTTTCCAACTCTTGATGCATTAAGCAGGTCCATCAGAATATCACT
rJMSF053M05+ AAACCTGTAACGAGGCTTTCCAACTCTTGATGCATTAAGCAGGTCCATCAGAATATCACT
rJMSF013C17+ AAACCTGTAACGAGGCTTTCCAACTCTTGATGCATTAAGCAGGTCCATCAGAATATCACT
rJMSF051I15+ AAACCTGTAACGAGGCTTTCCAACTCTTGATGCATTAAGCAGGTCCATCAGAATATCACT
rJMFF026K13+ AAACCTGTAACGAGGCTTTCCAACTCTTGATGCATTAAGCAGGTCCATCAGAATATCACT
rJMFF012L14+ AAACCTGTAACGAGGCTTTCCAACTCTTGATGCATTAAGCAGGTCCATCAGAATATCACT
                      ____________________________________________________________
consensus AAACCTGTAACGAGGCTTTCCAACTCTTGATGCATTAAGCAGGTCCATCAGAATATCACT
 
. : . : . : . : . : . :
rJMSF013P20+ CATGCTTGGCGCAAAAGCTTTATAGCATTTTACAGTCCTATAGATTTCCCAAGAAACCCG
rJMSF053M05+ CATGCTTGGCGCAAAAGCTTTATAGCATTTTACAGTCCTATAGATTTCCCAAGAAACCCG
rJMSF013C17+ CATGCTTGGCGCAAAAGCTTTATAGCATTTTACAGTCCTATAGATTTCCCAAGAAACCCG
rJMSF051I15+ CATGCTTGGCGCAAAAGCTTTATAGCATTTTACAGTCCTATAGATTTCCCAAGAAACCCG
rJMFF026K13+ CATGCTTGGCGCAAAAGCTTTATAGCATTTTACAGTCCTATAGATTTCCCAAGAAACCCG
rJMFF012L14+ CATGCTTGGCGCAAAAGCTTTATAGCATTTTACAGTCCTATAGATTTCCCAAGAAACCCG
                      ____________________________________________________________
consensus CATGCTTGGCGCAAAAGCTTTATAGCATTTTACAGTCCTATAGATTTCCCAAGAAACCCG
 
. : . : . : . : . : . :
rJMSF013P20+ TTTTCAGCAGTACTATTAAGGTTATGTAAAACCTATTGTGCCATGCTATGACTGTAGTAC
rJMSF053M05+ TTTTCAGCAGTACTATTAAGGTTATGTAAAACCTATTGTGCCATGCTATGACTGTAGTAC
rJMSF013C17+ TTTTCAGCAGTACTATTAAGGTTATGTAAAACCTATTGTGCCATGCTATGACTGTAGTAC
rJMSF051I15+ TTTTCAGCAGTACTATTAAGGTTATGTAAAACCTATTGTGCCATGCTATGACTGTAGTAC
rJMFF026K13+ TTTTCAGCAGTACTATTAAGGTTATGTAAAACCTATTGTGCCATGCTATGACTGTAGTAC
rJMFF012L14+ TTTTCAGCAGTACTATTAAGGTTATGTAAAACCTATTGTGCCATGCTATGACTGTAGTAC
                      ____________________________________________________________
consensus TTTTCAGCAGTACTATTAAGGTTATGTAAAACCTATTGTGCCATGCTATGACTGTAGTAC
 
. : . : . : . : . : . :
rJMSF013P20+ TCCTTGGTGTTATTTCTTGATGTTTTCAGGCCTGCCGCCTGCATTTCACATTA
rJMSF053M05+ TCCTTGGTGTTATTTCTTGATGTTTTCAGGCCTGCCGCCTGCATTTCACATTACTTCCCT
rJMSF013C17+ TCCTTGGTGTTATTTCTTGATGTTTTCAGGCCTGCCGCCTGCATTTCACATTACTTCCCT
rJMSF051I15+ TCCTTGGTGTTATTTCTTGATGTTTTCAGGCCTGCCGCCTGCATTTCACATTACTTCCCT
rJMFF026K13+ TCCTTGGTGTTATTTCTTGATGTTTTCAGGCCTGCCGCCTGCATTTCACATTACTTCCCT
rJMFF012L14+ TCCTTGGTGTTATTTCTTGATGTTTTCAGGCCTGCCGCCTGCATTTCACATTACTTCCCT
                      ____________________________________________________________
consensus TCCTTGGTGTTATTTCTTGATGTTTTCAGGCCTGCCGCCTGCATTTCACATTACTTCCCT
 
. : . : . : . : . : . :
rJMSF053M05+ GATGTATT
rJMSF013C17+ GATGTATTTTGGTAATGCAGCATGTATTGTGCC
rJMSF051I15+ GATGTATTTTGGTAATGCAGCATGTATTGTGCCCTTTTATCATCACCCT
rJMFF026K13+ GATGTATTTTGGTAATGCAGCATGTATTGTGCCCTTTTATCATCACCCTATAATGTCATA
rJMFF012L14+ GATGTATTTTGGTAATGCAGCATGTATTGTGCCCTTTTATCATCACCCTATAATGTCATA
                      ____________________________________________________________
consensus GATGTATTTTGGTAATGCAGCATGTATTGTGCCCTTTTATCATCACCCTATAATGTCATA
 
. : . : . : . : . : . :
rJMFF026K13+ TCGTATGTGTACAAATTTGTGCACGGTGCATGTATATACAAATTTCATTGAAACCGAGT
rJMFF012L14+ TCGTATGTGTACAAATTTGTGCACGGTGCATGTATATACAAATTTCATTGAAACCGAGTA
                      ____________________________________________________________
consensus TCGTATGTGTACAAATTTGTGCACGGTGCATGTATATACAAATTTCATTGAAACCGAGTA