| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011E02 | Sequence | 541 | 005362 (11) | gb|EYU26084.1| | 7e-27 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | 512 | 005362 (11) | gb|EYU26084.1| | 5e-27 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] |
| JMFF049I07 | Sequence | 487 | 005362 (11) | gb|EYU26084.1| | 6e-22 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | 351 | 005362 (11) | |||
| JMFN016I16 | Sequence | 518 | 005362 (11) | ref|XP_009613539.1| | 77.4 | PREDICTED: uncharacterized protein LOC104106657 [Nicotiana tomentosiformis] | |||||
| JMFN017M23 | Sequence | 410 | 005362 (11) | gb|EYU26084.1| | 9e-28 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | |||||
| JMFN032E15 | Sequence | 547 | 005362 (11) | gb|EYU26084.1| | 5e-27 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | |||||
| JMFN039J20 | Sequence | 494 | 005362 (11) | gb|EYU26084.1| | 2e-27 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | |||||
| JMFN039L16 | Sequence | 494 | 005362 (11) | gb|EYU26084.1| | 2e-27 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | |||||
| JMFS035F11 | Sequence | 471 | 005362 (11) | gb|EYU26084.1| | 2e-27 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | |||||
| JMFS087C05 | Sequence | 448 | 005362 (11) | gb|EYU26084.1| | 1e-27 | hypothetical protein MIMGU_mgv1a017465mg [Erythranthe guttata] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN016I16+ AATCTCACATGTCAGTATTATAAACTCTTCACTCTGCAGGGCAATATCA
JMFN032E15+ AATCTCACATGTCAGTATTATAAACTCTTCACTCTGCAGGGCAATATCA
____________________________________________________________
consensus AATCTCACATGTCAGTATTATAAACTCTTCACTCTGCAGGGCAATATCA
. : . : . : . : . : . :
rJMFF049I07- TGCCTAAAAATTTAAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFN016I16+ TTGCAATGCCTAAAAATTTAAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFN039L16+ GCAATGCCTAAAAATTTAAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFN039J20+ GCAATGCCTAAAAATTTAAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFS035F11+ AAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFF049I07+ TTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFN032E15+ TTGCAATGCCTAAAAATTTAAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFF011E02+ GCAATGCCTAAAAATTTAAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
JMFS087C05+ GGTAAGATTCATATGTTC
rJMFF011E02- ATACTTCATCATGTTGGTAAGATTCATATGTTC
____________________________________________________________
consensus TTGCAATGCCTAAAAATTTAAAATTCAATACTTCATCATGTTGGTAAGATTCATATGTTC
. : . : . : . : . : . :
rJMFF049I07- CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFN016I16+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFN039L16+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFN039J20+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFS035F11+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFF049I07+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFN032E15+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFF011E02+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFS087C05+ CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
JMFN017M23+ AAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
rJMFF011E02- CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
____________________________________________________________
consensus CTAAGATTGAGATACTGTGTAAGTACTTCCAAACGATGGGTGAATTTATTAACAAGCCCA
. : . : . : . : . : . :
rJMFF049I07- GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFN016I16+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFN039L16+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFN039J20+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFS035F11+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFF049I07+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFN032E15+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFF011E02+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFS087C05+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
JMFN017M23+ GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
rJMFF011E02- GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
____________________________________________________________
consensus GAGCAAAGCTCAGAACAATTGCAATTCCTCTAGAGCAGCAACCGTAAGGATGATGAACTA
. : . : . : . : . : . :
rJMFF049I07- CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCCAGAAA
JMFN016I16+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFN039L16+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFN039J20+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFS035F11+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFF049I07+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFN032E15+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFF011E02+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFS087C05+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
JMFN017M23+ CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
rJMFF011E02- CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
____________________________________________________________
consensus CGATTTCATTTATGAATACTCTTTGGATCCCATAAATGCGGGAAAATAAAGATCAAGAAA
. : . : . : . : . : . :
rJMFF049I07- ATTTACAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFN016I16+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFN039L16+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFN039J20+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFS035F11+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFF049I07+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFN032E15+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFF011E02+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFS087C05+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
JMFN017M23+ ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
rJMFF011E02- ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
____________________________________________________________
consensus ATTTAGAAATGGAATGCATGGGGCAGTCTACTCAGCAGCTTCCACTTGTTTTGTTGCCTC
. : . : . : . : . : . :
rJMFF049I07- CACTGCTTTCACCTTTTCTAATGCTGAAATA
JMFN016I16+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFN039L16+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFN039J20+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFS035F11+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFF049I07+ CAGTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFN032E15+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFF011E02+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFS087C05+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
JMFN017M23+ CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
rJMFF011E02- CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
____________________________________________________________
consensus CACTGCTTTCACCTTTTCTAATGCTGAAATACGTCCATTTAGAGATTCGTAGACACCATT
. : . : . : . : . : . :
JMFN016I16+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAG
JMFN039L16+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
JMFN039J20+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
JMFS035F11+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
JMFF049I07+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTCTAGAACGTAAAGTCC
JMFN032E15+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
JMFF011E02+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
JMFS087C05+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
JMFN017M23+ CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
rJMFF011E02- CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
____________________________________________________________
consensus CATCTGCGTTGAGAGAGCATGATGGGCGGTCTTGTAATCATTGTGGAGAACGTAAAGTCC
. : . : . : . : . : . :
JMFN039L16+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
JMFN039J20+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
JMFS035F11+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
JMFF049I07+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCTGTACCCTCAGCACGA
JMFN032E15+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
JMFF011E02+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
JMFS087C05+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
JMFN017M23+ GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
rJMFF011E02- GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
____________________________________________________________
consensus GATTGCCGACGCCACCGCTGCTCCGGTGAAGAAAGACGCGAATCT-CACCCTCAGCACGA
. : . : . : . : . : . :
JMFN039L16+ ACCCCATTCTTTCTGCT
JMFN039J20+ ACCCCATTCTTTCTGCT
JMFS035F11+ ACCCCATTCTT
JMFF049I07+ ACCCCATTCTTTCT
JMFN032E15+ ACCCCATTCTTTCTGCT
JMFF011E02+ ACCCCATTCTTTCTGCTTCCTCTCTCTCTCTCTCTATTGTTTTACCCATAAATCCATAAT
JMFS087C05+ ACCCCATTCTT
JMFN017M23+ ACCCCAT
rJMFF011E02- ACCCCATTCTTTCTGCTTCCTCTCTCTCTCTCTCTATTGTTTTACCCATAAATCCATAAT
____________________________________________________________
consensus ACCCCATTCTTTCTGCTTCCTCTCTCTCTCTCTCTATTGTTTTACCCATAAATCCATAAT