Contig 005361:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN038I08+                       AATGCTTCAATCAACAATCATAAGCTTTCAAACAGACTAAGCTAAAGT
                      ____________________________________________________________
consensus                         AATGCTTCAATCAACAATCATAAGCTTTCAAACAGACTAAGCTAAAGT
 
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JMFN038I08+           GCTAAACTCCATATAAATATACAAAATCAGCAAACATTTTCACCAAAGGTAGAAAGAAAA
JMFF011A06+                                                TTTCACCAAAGGTAGAAAGAAAA
rJMFF011A06-                                                                   AAA
                      ____________________________________________________________
consensus             GCTAAACTCCATATAAATATACAAAATCAGCAAACATTTTCACCAAAGGTAGAAAGAAAA
 
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JMFN038I08+           TCCATGAAAAAATAAAAGAAATATCAATTCCCTCACATTCAATTCCCAGTTTTGTACAGA
JMFF011A06+           TCCATGAAAAAATAAAAGAAATATCAATTCCCTCACATTCAATTCCCAGTTTTGTACAGA
rJMFF011A06-          TCCATGAAAAAATAAAAGAAATATCAATTCCCTCACATTCAATTCCCAGTTTTGTACAGA
                      ____________________________________________________________
consensus             TCCATGAAAAAATAAAAGAAATATCAATTCCCTCACATTCAATTCCCAGTTTTGTACAGA
 
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JMFN038I08+           AATGCAGAATAAAAGCGGTATAAGATAACATCGATACCAAGTAATTTATCTTTTAACAGT
JMFF011A06+           AATGCAGAATAAAAGCGGTATAAGATAACATCGATACCAAGTAATTTATCTTTTAACAGT
rJMFF011A06-          AATGCAGAATAAAAGCGGTATAAGATAACATCGATACCAAGTAATTTATCTTTTAACAGT
                      ____________________________________________________________
consensus             AATGCAGAATAAAAGCGGTATAAGATAACATCGATACCAAGTAATTTATCTTTTAACAGT
 
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JMFN038I08+           AGGGATTGTGAAAAGAACCGGCGATCGGGTTTGCTAATGGCGTAGAATTTCGAGGATCAA
JMFF011A06+           AGGGATTGTGAAAAGAACCGGCGATCGGGTTTGCTAATGGCGTAGAATTTCGAGGATCAA
rJMFF011A06-          AGGGATTGTGAAAAGAACCGGCGATCGGGTTTGCTAATGGCGTAGAATTTCGAGGATCAA
                      ____________________________________________________________
consensus             AGGGATTGTGAAAAGAACCGGCGATCGGGTTTGCTAATGGCGTAGAATTTCGAGGATCAA
 
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JMFN038I08+           ACGGCTTTGACGACAGGAGAGGCGGCGGAGTAGTAGGCTTCGGCCGGTGTGGGATCCGGG
JMFF011A06+           ACGGCTTTGACGACAGGAGAGGCGGCGGAGTAGTAGGCTTCGGCCGGTGTGGGATCCGGG
rJMFF011A06-          ACGGCTTTGACGACAGGAGAGGCGGCGGAGTAGTAGGCTTCGGCCGGTGTGGGATCCGGG
                      ____________________________________________________________
consensus             ACGGCTTTGACGACAGGAGAGGCGGCGGAGTAGTAGGCTTCGGCCGGTGTGGGATCCGGG
 
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JMFN038I08+           TTGAGAGGGACCCGAGCGTCGTGATCGTCCGGGTCGTAATCCGGGTTGAGGTTGCGATCC
JMFF011A06+           TTGAGAGGGACCCGAGCGTCGTGATCGTCCGGGTCGTAATCCGGGTTGAGGTTGCGATCC
rJMFF011A06-          TTGAGAGGGACCCGAGCGTCGTGATCGTCCGGGTCGTAATCCGGGTTGAGGTTGCGATCC
                      ____________________________________________________________
consensus             TTGAGAGGGACCCGAGCGTCGTGATCGTCCGGGTCGTAATCCGGGTTGAGGTTGCGATCC
 
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JMFN038I08+           ACGGCTTCCCGGCCCTTCTCCAGGCAAGGCTTGCAGGCCATCTCGATGGTGATCCACCCA
JMFF011A06+           ACGGCTTCCCGGCCCTTCTCCAGGCAAGGCTTGCAGGCCATCTCGATGGTGATCCACCCA
rJMFF011A06-          ACGGCTTCCCGGCCCTTCTCCAGGCAAGGCTTGCAGGCCATCTCGATGGTGATCCACCCA
                      ____________________________________________________________
consensus             ACGGCTTCCCGGCCCTTCTCCAGGCAAGGCTTGCAGGCCATCTCGATGGTGATCCACCCA
 
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JMFN038I08+           AGTATTACCCCCGCTATTGCTATTAAGGATGCTGTCAACGCCCCCATTTCTCTTCTCTCT
JMFF011A06+           AGTATTACCCCCGCTATTGCTATTAAGGATGCTGTCAACGCCCCCATTTCTCTTCTCTCT
rJMFF011A06-          AGTATTACCCCCGCTATTGCTATTAAGGATGCTGTCAACGCCCCCATTTCTCTTCTCTCT
                      ____________________________________________________________
consensus             AGTATTACCCCCGCTATTGCTATTAAGGATGCTGTCAACGCCCCCATTTCTCTTCTCTCT
 
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JMFN038I08+           TCTCTCTTCGCTTCTCACTTCTCTCTGT                                
JMFF011A06+           TCTCTCTTCGCTTCTCACTTCTCTCTGTTGTAATAGACCCAAACGAAGATGGTGATGAGG
rJMFF011A06-          TCTCTCTTCGCTTCTCACTTCTCTCTGTTGTAATAGACCCAAACGAAGATGGTGATGAGG
                      ____________________________________________________________
consensus             TCTCTCTTCGCTTCTCACTTCTCTCTGTTGTAATAGACCCAAACGAAGATGGTGATGAGG
 
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JMFF011A06+           GTGAAGAAGGCTATTCAGCTCTCTAGAAGACTAGAAGAAAAATCTTTTGTTTTGTACACC
rJMFF011A06-          GTGAAGAAGGCTATTCAGCTCTCTAGAAGACTAGAAGAAAAATCTTTTGTTTTGTACACC
                      ____________________________________________________________
consensus             GTGAAGAAGGCTATTCAGCTCTCTAGAAGACTAGAAGAAAAATCTTTTGTTTTGTACACC
 
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JMFF011A06+           GTATAAGTTTGCAGCCTCAACATT                                    
rJMFF011A06-          GTATAAGTTTGCAGCCTCAACATTCGGTTCTCGAGTCATCGCTGTTCCAGATAGCGATGA
                      ____________________________________________________________
consensus             GTATAAGTTTGCAGCCTCAACATTCGGTTCTCGAGTCATCGCTGTTCCAGATAGCGATGA