Contig 005360:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P19Sequence599005360 (5)ref|XP_006419524.1|1e-107hypothetical protein CICLE_v10005665mg [Citrus clementina] ref|XP_006489042.1| P741005360 (5)emb|CDO98839.1|9e-114unnamed protein product [Coffea canephora]
JMSF002B20Sequence275005360 (5)ref|XP_011071433.1|3e-15PREDICTED: acylpyruvase FAHD1, mitochondrial [Sesamum indicum]732005360 (5)emb|CDO98839.1|9e-82unnamed protein product [Coffea canephora]
JMSF006N09Sequence255000606 (3)182005360 (5)emb|CDO98839.1|8e-20unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF002B20- ACAGAACAACGCCGATTTGTAATTTAGTCTTGGC
JMFF010P19- ATATGTACAGAACAACGCCGATTTGTAATTTAGTCTTGGC
                      ____________________________________________________________
consensus ATATGTACAGAACAACGCCGATTTGTAATTTAGTCTTGGC
 
. : . : . : . : . : . :
JMSF002B20- ACGAACGTCAAGTAGGAAGATGGCAACAGCTGCGTCTGCGTGTCAGAAGTTGCTCACCGT
JMFF010P19- ACGAACGTCAAGTAGGAAGATGGCAACAGCTGCGTCTGCGTGTCAGAAGTTGCTCACCGT
                      ____________________________________________________________
consensus ACGAACGTCAAGTAGGAAGATGGCAACAGCTGCGTCTGCGTGTCAGAAGTTGCTCACCGT
 
. : . : . : . : . : . :
JMSF002B20- TGGCACTAAAATCATCGGCGTCGGCCGCAACTTCGCCGCTCACGCCAAAGAACTCGGCAA
JMFF010P19- TGGCACTAAAATCATCGGCGTCGGCCGCAACTTCGCCGCTCACGCCAAAGAACTCGGCAA
                      ____________________________________________________________
consensus TGGCACTAAAATCATCGGCGTCGGCCGCAACTTCGCCGCTCACGCCAAAGAACTCGGCAA
 
. : . : . : . : . : . :
JMSF002B20- CTCCATCCCCAAAG
JMFF010P19- CTCCATCCCCAAAGAGCCTGTGTTGTTTCTGAAACCGACTACGTCGTATTTGCAAAATGG
rJMSF002B20+ GAGCCTGTGTTGTTTCTGAAACCGACTACGTCGTATTTGCAAAATGG
rJMFF010P19+ GAGCCTGTGTTGTTTCTGAAACCGACTACGTCGTATTTGCAAAATGG
                      ____________________________________________________________
consensus CTCCATCCCCAAAGAGCCTGTGTTGTTTCTGAAACCGACTACGTCGTATTTGCAAAATGG
 
. : . : . : . : . : . :
JMFF010P19- AGGTACGATCGAGATTCCACAATCCTTGGAAACGCTGCATCACGAGGTAGAGCTGGCGGT
rJMSF002B20+ AGGTACGATCGAGATTCCACAATCCTTGGAAACGCTGCATCACGAGGTAGAGCTGGCGGT
rJMFF010P19+ AGGTACGATCGAGATTCCACAATCCTTGGAAACGCTGCATCACGAGGTAGAGCTGGCGGT
                      ____________________________________________________________
consensus AGGTACGATCGAGATTCCACAATCCTTGGAAACGCTGCATCACGAGGTAGAGCTGGCGGT
 
. : . : . : . : . : . :
JMFF010P19- GGTGATCGGCCAAAGAGCTAGGGATGTCACCCCCGGTAGTGCCATGGATTATATTGGAGG
rJMSF002B20+ GGTGATCGGCCAAAGAGCTAGGGATGTCACCCCCGGTAGTGCCATGGATTATATTGGAGG
rJMFF010P19+ GGTGATCGGCCAAAGAGCTAGGGATGTCACCCCCGGTAGTGCCATGGATTATATTGGAGG
                      ____________________________________________________________
consensus GGTGATCGGCCAAAGAGCTAGGGATGTCACCCCCGGTAGTGCCATGGATTATATTGGAGG
 
. : . : . : . : . : . :
JMFF010P19- CTATGCTGTTGCATTGGATATGACTGCAAGGGAAATCCAATCTGCTGCAAAGTCTGCAGG
rJMSF002B20+ CTATGCTGTTGCATTGGATATGACTGCAAGGGAAATCCAATCTGCTGCAA-------AGG
rJMFF010P19+ CTATGCTGTTGCATTGGATATGACTGCAAGGGAAATCCAATCTGCTGCAAAGTCTGCAGG
                      ____________________________________________________________
consensus CTATGCTGTTGCATTGGATATGACTGCAAGGGAAATCCAATCTGCTGCAAAGTCTGCAGG
 
. : . : . : . : . : . :
JMFF010P19- TCTGCCATGGACTGTAGCTAAAGGCCAAGACACTTTCACGCCAATCAGCTCTATTTTACC
rJMSF002B20+ TCTGCCATGGACTGTAGCTAAAGGCCAAGACACTTTCACGCCAATCAGCTCTATTTTACC
rJMFF010P19+ TCTGCCATGGACTGTAGCTAAAGGCCAAGACACTTTCACGCCAATCAGCTCTATTTTACC
                      ____________________________________________________________
consensus TCTGCCATGGACTGTAGCTAAAGGCCAAGACACTTTCACGCCAATCAGCTCTATTTTACC
 
. : . : . : . : . : . :
JMFF010P19- TTGTTCAATGGTGCCAGACCCTCATGATGTAGAATTATGGTTGAAGGTTGATGGAGAAAT
rJMSF002B20+ TTGTTCAATGGTGCCAGACCCTCATGATGTAGAATTATGGTTGAAGGTTGATGGAGAAAT
rJMFF010P19+ TTGTTCAATGGTGCCAGACCCTCATGATGTAGAATTATGGTTGAAGGTTGATGGAGAAAT
                      ____________________________________________________________
consensus TTGTTCAATGGTGCCAGACCCTCATGATGTAGAATTATGGTTGAAGGTTGATGGAGAAAT
 
. : . : . : . : . : . :
JMFF010P19- TCGGCAAAAAGGCTCTACAAGGGATATGATATTCAAGATCCCGTATTTAGTTAGCCACAT
rJMSF006N09+ ACAT
rJMSF002B20+ TCGGCAAAAAGGCTCTACAAGGGATATGATATTCAAGATCCCGTATTTAGTTAGCCACAT
rJMFF010P19+ TCGGCAAAAAGGCTCTACAAGGGATATGATATTCAAGATCCCGTATTTAGTTAGCCACAT
                      ____________________________________________________________
consensus TCGGCAAAAAGGCTCTACAAGGGATATGATATTCAAGATCCCGTATTTAGTTAGCCACAT
 
. : . : . : . : . : . :
JMFF010P19- AAGTAGTATTATGACACTT
rJMSF006N09+ AAGTAGTATTATGACACTTGCTGAGGGAGATGTCATCTTGACTGGAACCCCTGAAGGTGT
rJMSF002B20+ AAGTAGTATTATGACACTTGCTGAGGGAGATGTCATCTTGACTGGAACCCCTGAAGGTGT
rJMFF010P19+ AAGTAGTATTATGACACTTGCTGAGGGAGATGTCATCTTGACTGGAACCCCTGAAGGTGT
                      ____________________________________________________________
consensus AAGTAGTATTATGACACTTGCTGAGGGAGATGTCATCTTGACTGGAACCCCTGAAGGTGT
 
. : . : . : . : . : . :
rJMSF006N09+ CGGCCCCGTAAAGGTGGGTCAAAAGGTTGAAGCTGGGATAACAGGTCTCCTGGATGTGCA
rJMSF002B20+ TGGCCCCGTAAAGGTGGGTCAAAAGGTTGAAGCTGGGATAACAGGTCTCCTGGATGTGCA
rJMFF010P19+ TGGCCCCGTAAAGGTGGGTCAAAAGGTTGAAGCTGGGATAACAGGTCTCCTGGATGTGCA
                      ____________________________________________________________
consensus TGGCCCCGTAAAGGTGGGTCAAAAGGTTGAAGCTGGGATAACAGGTCTCCTGGATGTGCA
 
. : . : . : . : . : . :
rJMSF006N09+ CTTCAACGTTGGAAGACGCCAGGGAGTGNCGCATTGATATGGTGCATTATTTAAGGGG
rJMSF002B20+ CTTCAACGTTGGAAGACGCCAGGGAGTGACGCATTGATATGGTGCATTATTTAAGGGGGT
rJMFF010P19+ CTTCAACGTTGGAAGACGCCAGGGAGTGACGCATTGATATGGTGCATTATTTAAGGGGGT
                      ____________________________________________________________
consensus CTTCAACGTTGGAAGACGCCAGGGAGTGACGCATTGATATGGTGCATTATTTAAGGGGGT
 
. : . : . : . : . : . :
rJMSF002B20+ AACCATACGGCATGGTCTCCAGCAAGTGTCGAGACTTTTTCTATTTTACCTTAATTATAA
rJMFF010P19+ AACCATACGGCATGGTCTCCAGCAAGTGTCGAGACTTTTTCTATTTTACCTTAATTATAA
                      ____________________________________________________________
consensus AACCATACGGCATGGTCTCCAGCAAGTGTCGAGACTTTTTCTATTTTACCTTAATTATAA
 
. : . : . : . : . : . :
rJMSF002B20+ AC
rJMFF010P19+ ACAGCAGTTTGTATTCAGACATGTGAGAACTCTGGTCAAGTATTCAGTTATAACTGAAGA
                      ____________________________________________________________
consensus ACAGCAGTTTGTATTCAGACATGTGAGAACTCTGGTCAAGTATTCAGTTATAACTGAAGA