Contig 005358:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010M04Sequence607016259ref|XP_009627494.1|5e-49PREDICTED: GPN-loop GTPase 1 homolog [Nicotiana tomentosiformis] ref|XP_00962749675005358 (2)emb|CDP08540.1|5e-49unnamed protein product [Coffea canephora]
JMFF030H19Sequence382013396 (4)747005358 (2)emb|CDP08540.1|5e-68unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+                                    CTGCTACTTTTATGAGCAACATGCTTTATGCATG
                      ____________________________________________________________
consensus                                       CTGCTACTTTTATGAGCAACATGCTTTATGCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          CAGTATCNTTTACAAGACACGACTGCNTCTGGTATTGGCATTCAACAAGACAGACGTAGC
rJMFF010M04+                                                       CAAGACAGACGTAGC
                      ____________________________________________________________
consensus             CAGTATCNTTTACAAGACACGACTGCNTCTGGTATTGGCATTCAACAAGACAGACGTAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          ACAGCATCAATTTGCTTTGGAGTGGATGGAGGATTTTGAAGCATTTCATGCAGCGCTTGA
rJMFF010M04+          ACAGCATCAATTTGCTTTGGAGTGGATGGAGGATTTTGAAGCATTTCATGCAGCGCTTGA
                      ____________________________________________________________
consensus             ACAGCATCAATTTGCTTTGGAGTGGATGGAGGATTTTGAAGCATTTCATGCAGCGCTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          CTCGGACAACTCTTACACTTCAACTCTGACACGAAGCCTATCCCTTTCGCTGGAGGAGTT
rJMFF010M04+          CTCGGACAACTCTTACACTTCAACTCTGACACGAAGCCTATCCCTTTCGCTGGAGGAGTT
                      ____________________________________________________________
consensus             CTCGGACAACTCTTACACTTCAACTCTGACACGAAGCCTATCCCTTTCGCTGGAGGAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          CTATAAGAATCTGAGGTCTGTAGGAGTTTCTGCTGTTTCAGGCGCGGGGATGGATGCGTT
rJMFF010M04+          CTATAAGAATCTGAGGTCTGTAGGAGTTTCTGCTGTTTCAGGCGCGGGGATGGATGCGTT
                      ____________________________________________________________
consensus             CTATAAGAATCTGAGGTCTGTAGGAGTTTCTGCTGTTTCAGGCGCGGGGATGGATGCGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          CTTTAAGGCCATTGATGCAAGTGCAGAGGAGTACATGGAAACTTACAAGGCTGAACTTGA
rJMFF010M04+          CTTTAAGGCCATTGATGCAAGTGCAGAGGAGTACATGGAAACTTACAAGGCTGAACTTGA
                      ____________________________________________________________
consensus             CTTTAAGGCCATTGATGCAAGTGCAGAGGAGTACATGGAAACTTACAAGGCTGAACTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          CAAGAAACTGGCGGAGAAGCAACGGTTGGAGGAAGAACGCAGGATGGAGAACATGGAGAA
rJMFF010M04+          CAAGAAACTGGCGGAGAAGCAACGGTTGGAGGAAGAACGCAGGATGGAGAACATGGAGAA
                      ____________________________________________________________
consensus             CAAGAAACTGGCGGAGAAGCAACGGTTGGAGGAAGAACGCAGGATGGAGAACATGGAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          GCTCAGGAAAGACATGGAGAAGTCTCGGGGAGAAACTGTGGTATTGAGCACTAGCTTAAA
rJMFF010M04+          GCTCAGGAAAGACATGGAGAAGTCTCGGGGAGAAACTGTGGTATTGAGCACTAGCTTAAA
                      ____________________________________________________________
consensus             GCTCAGGAAAGACATGGAGAAGTCTCGGGGAGAAACTGTGGTATTGAGCACTAGCTTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          GGATAACACCATGATGGAAGAAGATGAAGAGGACGAAGATCTGGAGGAAGATTTTGGGAG
rJMFF010M04+          GGATAACACCATGATGGAAGAAGATGAAGAGGACGAAGATCTGGAGGAAGATTTTGGGAG
                      ____________________________________________________________
consensus             GGATAACACCATGATGGAAGAAGATGAAGAGGACGAAGATCTGGAGGAAGATTTTGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          ATTCGGCGAGGATGATGATGATGATGATGGTGGCATAAGTGATGAGGATGAAGAAATTGG
rJMFF010M04+          ATTCGGCGAGGATGATGATGATGATGATGGTGGCATAAGTGATGAGGATGAAGAAATTGG
                      ____________________________________________________________
consensus             ATTCGGCGAGGATGATGATGATGATGATGGTGGCATAAGTGATGAGGATGAAGAAATTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          AAGTTTTTCTTTCTGATATGGCAAAAGAAAAGTTTGTATATTACTGATGGATGAAAGTGA
rJMFF010M04+          AAGTTTTTCTTTCTGATATGGCAAAAGAAAAGTTTGTATATTACTGATGGATGAAAGTGA
                      ____________________________________________________________
consensus             AAGTTTTTCTTTCTGATATGGCAAAAGAAAAGTTTGTATATTACTGATGGATGAAAGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          ACTGGACCAACTTACAAGAGACGTAAATGTCAGTTTTGCCCTTATGCAGTGATAATTGGT
rJMFF010M04+          ACTGGACCAACTTACAAGAGACGTAAATGTCAGTTTTGCCCTTATGCAGTGATAATTGGT
                      ____________________________________________________________
consensus             ACTGGACCAACTTACAAGAGACGTAAATGTCAGTTTTGCCCTTATGCAGTGATAATTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF030H19+          CCTCACAGATTAGGAAGACTGGATGTGAAATGACTATCAAGTATGAACTCATT       
rJMFF010M04+          CCTCACAGATTAGGAAGACTGGATGTGAAATGACTATCAAGTATGAACTCATTTTAACGG
                      ____________________________________________________________
consensus             CCTCACAGATTAGGAAGACTGGATGTGAAATGACTATCAAGTATGAACTCATTTTAACGG