Contig 005357:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010L16Sequence550004490 (2)ref|XP_011087753.1|2e-51PREDICTED: 3-ketoacyl-CoA synthase 7 [Sesamum indicum]746005357 (3)ref|XP_010657694.1|4e-105PREDICTED: 3-ketoacyl-CoA synthase 7 [Vitis vinifera]
JMFF025J12Sequence778005357 (3)ref|XP_010657694.1|2e-81PREDICTED: 3-ketoacyl-CoA synthase 7 [Vitis vinifera]
JMFN007A11Sequence364005357 (3)ref|XP_010657694.1|2e-22PREDICTED: 3-ketoacyl-CoA synthase 7 [Vitis vinifera]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+                                          GACAGAAAAAGGGCAAAATATAGGCTCA
rJMFF010L16+                                            CAGAAAAAGGGCAAAATATAGGCTCA
                      ____________________________________________________________
consensus                                             GACAGAAAAAGGGCAAAATATAGGCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          AACATCTTGTGAGAACACACATGGGAGAAGGTGATGATTCATACCACTCAGTCTTCCAGG
rJMFF010L16+          AACATCTTGTGAGAACACACATGGGAGAAGATGATGATTCATACCACTCAGTCTTCCAGG
                      ____________________________________________________________
consensus             AACATCTTGTGAGAACACACATGGGAGAAGGTGATGATTCATACCACTCAGTCTTCCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          AAAATGATGAATCAGGGCACATGGGAGTCTACCTCTCAAGAAACCTCCTCCAAGTAGCTG
rJMFF010L16+          AAAATGATGAATCAGGGCACATGGGAGTCTACCTCTCAAGAAACCTCCTCCAAGTAGCTG
                      ____________________________________________________________
consensus             AAAATGATGAATCAGGGCACATGGGAGTCTACCTCTCAAGAAACCTCCTCCAAGTAGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          GGAAGGCCCTGAGAACCAACATATCGGACCTCG-CCCCCGGGTCCTCCCCTTCTCCGAGC
rJMFF010L16+          GGAAGGCCCTGAGAACCAACATATCGGACCTCGCCCCCCGGGTCCTCCCCTTCTCCGAGC
                      ____________________________________________________________
consensus             GGAAGGCCCTGAGAACCAACATATCGGACCTCGCCCCCCGGGTCCTCCCCTTCTCCGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          TCCTCCTCTATGCATGCTCGCTCCTCCCACGACGAAAGGCGGGCCCCACATACACACCAA
rJMFF010L16+          TCCTCCTCTATGCATGCTCGCTCCTCCCACGACGAAAGGCGGGCCCCACATACACACCAA
                      ____________________________________________________________
consensus             TCCTCCTCTATGCATGCTCGCTCCTCCCACGACGAAAGGCGGGCCCCACATACACACCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          ATTTCAAGAAATCGTTCGAGCATTTCTGCATACACGCGGGGGGCAGGGCGGTGATCGATG
rJMFF010L16+          ATTTCAAGAGATCGTTCGAGCATTTCTGCATACACGCGGGGGGCAGGGCGGTGATCGATG
                      ____________________________________________________________
consensus             ATTTCAAGAGATCGTTCGAGCATTTCTGCATACACGCGGGGGGCAGGGCGGTGATCGATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          CAGTGGAGGAGAGCCTGAGGCTGAGCAAGGAAGATGCTGAGGCCTCAAGAATGACACTCT
rJMFF010L16+          CAGTGGAGGAGAGCCTGAGGCTGAGCAAGGAAGATGCTGAGGCCTCAAGAATGACACTCT
                      ____________________________________________________________
consensus             CAGTGGAGGAGAGCCTGAGGCTGAGCAAGGAAGATGCTGAGGCCTCAAGAATGACACTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          ATAGATTTGGCAACACTTCATCTTCTTCCATTTGGTATGAGCTGTGTTACCTTGAGGCTA
rJMFF010L16+          ATAGATTTGGCAACACTTCATCTTCTTCCATTTGGTATGAGCTGTGTTACCTTGAGGCTA
                      ____________________________________________________________
consensus             ATAGATTTGGCAACACTTCATCTTCTTCCATTTGGTATGAGCTGTGTTACCTTGAGGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          AAGGGAGGGTTAAGAAGGGTGATAGGGTTTGGCAGATTGCATTTGGGAGTGGATTTAAGT
JMFN007A11+                              TGATAGGGTTTGGCAGATTGCATTTGGGAGTGGATTTAAGT
rJMFF010L16+          AAGGGAGGGTTAAGAAGGGTGATAGGGTTTGGCAGATTGCATTTGGGAGTGGATTTAAGT
                      ____________________________________________________________
consensus             AAGGGAGGGTTAAGAAGGGTGATAGGGTTTGGCAGATTGCATTTGGGAGTGGATTTAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          GCAATAGTGCAGTTTGGAAGTGCATTTCTGAGCTTGATCCAAAGCCTTATAATGCATGGT
JMFN007A11+           GCAATAGTGCAGTTTGGAAGTGCATTTCTGAGCTTGATCCAAAGCCTTATAATGCATGGT
rJMFF010L16+          GCAATAGTGCAGTTTGGAAGTGCATTTCTGAGCTTGATCCAAAGCCTTATAATGCATGGT
                      ____________________________________________________________
consensus             GCAATAGTGCAGTTTGGAAGTGCATTTCTGAGCTTGATCCAAAGCCTTATAATGCATGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF025J12+          CTGACAGGATTGATAGGTACCCTGTGGAGGTTCCAAGGATTTTGGATCATTAAGC     
JMFN007A11+           CTGACAGGATTGATAGGTACCCTGTGGAGGTTCCAAGGATTTTGGATCATTAAGC     
rJMFF010L16+          CTGACAGGATTGATAGGTACCCTGTGGAGGTTCCAAGGATTTTGGATCATTAAGCTAAGC
                      ____________________________________________________________
consensus             CTGACAGGATTGATAGGTACCCTGTGGAGGTTCCAAGGATTTTGGATCATTAAGCTAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF010L16+          ATCCCTCTCACAATTTCATGTGCAATTAATATGCAAATAATAAAGATCACAAAGCATATA
                      ____________________________________________________________
consensus             ATCCCTCTCACAATTTCATGTGCAATTAATATGCAAATAATAAAGATCACAAAGCATATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF010L16+          TACCTCATTGTTAGTACCATATATAATAAGGTTTACTAAAATCACAAACTTAGGATACAA
                      ____________________________________________________________
consensus             TACCTCATTGTTAGTACCATATATAATAAGGTTTACTAAAATCACAAACTTAGGATACAA