asagaodb

Contig 005356: Sequence
BLAST Hits against nr-aa DB Show

clone	5'-sequence						3'-sequence
clone	Seq.	length	contig	BestHit	Evalue	description	length	contig	BestHit	Evalue	description
JMFF010E07	Sequence	603	005356 (6)	ref\|XP_004232914.1\|	1e-66	PREDICTED: uncharacterized protein At4g28440-like [Solanum lycopersicum]	771	005356 (6)	ref\|XP_009630306.1\|	2e-61	PREDICTED: uncharacterized protein At4g28440-like [Nicotiana tomentosiformis]
JMFF020F15	Sequence	595	005356 (6)	ref\|XP_004232914.1\|	8e-67	PREDICTED: uncharacterized protein At4g28440-like [Solanum lycopersicum]	784	005356 (6)	ref\|XP_009630306.1\|	3e-61	PREDICTED: uncharacterized protein At4g28440-like [Nicotiana tomentosiformis]
JMSF013M22	Sequence	455	005356 (6)	ref\|XP_004232914.1\|	3e-66	PREDICTED: uncharacterized protein At4g28440-like [Solanum lycopersicum]	747	005356 (6)	ref\|XP_004232914.1\|	4e-62	PREDICTED: uncharacterized protein At4g28440-like [Solanum lycopersicum]
Alignment

This contig is upended


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JMFF020F15-                                     AACGACGACTCTTTCAAATTCGCCAAAATCTTCT
JMSF013M22-                                                           CCAAAATCTTCT
JMFF010E07-                                     AACGACGACTCTTTCAAATTCGCCAAAATCTTCT
                      ____________________________________________________________
consensus                                       AACGACGACTCTTTCAAATTCGCCAAAATCTTCT
 
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JMFF020F15-           CCTTTCTCTCACTGCAATCCATGGCTACCAGAAGCTACAACCGCCGCCGACCGTCCGCCG
JMSF013M22-           CCTTTCTCTCACTGCAATCCATGGCTACCAGAAGCTACAACCGCCGCCGACCGTCCGCCG
JMFF010E07-           CCTTTCTCTCACTGCAATCCATGGCTACCAGAAGCTACAACCGCCGCCGACCGTCCGCCG
rJMSF013M22+                                              ACAACCGCCGCCGACCGTCCGCCG
rJMFF020F15+                                                                 CGCCG
                      ____________________________________________________________
consensus             CCTTTCTCTCACTGCAATCCATGGCTACCAGAAGCTACAACCGCCGCCGACCGTCCGCCG
 
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JMFF020F15-           CCGGCGGTGCCGTGAAGACGCCAATGAGGAAGCCGGTGTTCGTGAAGGTGGATCAGTTGC
JMSF013M22-           CCGGCGGTGCCGTGAAGACGCCAATGAGGAAGCCGGTGTTCGTGAAGGTGGATCAGTTGC
JMFF010E07-           CCGGCGGTGCCGTGAAGACGCCAATGAGGAAGCCGGTGTTCGTGAAGGTGGATCAGTTGC
rJMSF013M22+          CCGGCNGTGCCGTGAAGACGCCAATGAGGAAGCCGGTGTTCGTGAAGGTGGATCAGTTGC
rJMFF020F15+          CCGGCGGTGCCGTGAAGACGCCAATGAGGAAGCCGGTGTTCGTGAAGGTGGATCAGTTGC
rJMFF010E07+                  GCCGTGAAGACGCCAATGAGGAAGCCGGTGTTCGTGAAGGTGGATCAGTTGC
                      ____________________________________________________________
consensus             CCGGCGGTGCCGTGAAGACGCCAATGAGGAAGCCGGTGTTCGTGAAGGTGGATCAGTTGC
 
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JMFF020F15-           AGCCCGGAACTACCGGCCATAACCTCACCGTCAAGGTTTTGAACTGCAACACAGTGCTGG
JMSF013M22-           AGCCCGGAACTACCGGCCATAACCTCACCGTCAAGGTTTTGAACTGCAACACAGTGCTGG
JMFF010E07-           AGCCCGGAACTACCGGCCATAACCTCACCGTCAAGGTTTTGAACTGCAACACAGTGCTGG
rJMSF013M22+          AGCCCGGAACTACCGGCCATAACCTCACCGTCAAGGTTTTGAACTGCAACACAGTGCTGG
rJMFF020F15+          AGCCCGGAACTACCGGCCATAACCTCACCGTCAAGGTTTTGAACTGCAACACAGTGCTGG
rJMFF010E07+          AGCCCGGAACTACCGGCCATAACCTCACCGTCAAGGTTTTGAACTGCAACACAGTGCTGG
                      ____________________________________________________________
consensus             AGCCCGGAACTACCGGCCATAACCTCACCGTCAAGGTTTTGAACTGCAACACAGTGCTGG
 
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JMFF020F15-           AGAAGAAGCCGACGAATACGGCGCCGTTAGCGGGTCCCCGTCGCCCTCCCCAGAACACTC
JMSF013M22-           AGAAGAAGCCGACGAATACGGCGCCGTTAGCGGGTCCCCGTCGCCCTCCCCAGAACACTC
JMFF010E07-           AGAAGAAGCCGACGAATACGGCGCCGTTAGCGGGTCCCCGTCGCCCTCCCCAGAACACTC
rJMSF013M22+          AGAAGAAGCCGACGAATACGGCGCCGTTAGCGGGTCCCCGTCGCCCTCCCCAGAACACTC
rJMFF020F15+          AGAAGAAGCCGACGAATACGGCGCCGTTAGCGGGTCCCCGTCGCCCTCCCCAGAACACTC
rJMFF010E07+          AGAAGAAGCCGACGAATACGGCGCCGTTAGCGGGTCCCCGTCGCCCTCCCCAGAACACTC
                      ____________________________________________________________
consensus             AGAAGAAGCCGACGAATACGGCGCCGTTAGCGGGTCCCCGTCGCCCTCCCCAGAACACTC
 
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JMFF020F15-           GCATCGCGGAGTGTCTCATCGGAGACGAAACTGGGACTATCCTCTTCACTGCCCGTAACG
JMSF013M22-           GCATCGCGGAGTGTCTCATCGGAGACGAAACTGGGACTATCCTCTTCACTGCCCGTAACG
JMFF010E07-           GCATCGCGGAGTGTCTCATCGGAGACGAAACTGGGACTATCCTCTTCACTGCCCGTAACG
rJMSF013M22+          GCATCGCGGAGTGTCTCATCGGAGACGAAACTGGGACTATCCTCTTCACTGCCCGTAACG
rJMFF020F15+          GCATCGCGGAGTGTCTCATCGGAGACGAAACTGGGACTATCCTCTTCACTGCCCGTAACG
rJMFF010E07+          GCATCGCGGAGTGTCTCATCGGAGACGAAACTGGGACTATCCTCTTCACTGCCCGTAACG
                      ____________________________________________________________
consensus             GCATCGCGGAGTGTCTCATCGGAGACGAAACTGGGACTATCCTCTTCACTGCCCGTAACG
 
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JMFF020F15-           ACCAAGTTGAATTGATGAAACCAGAAACCACTGTAATTCTTCGCAACGCCAAGATCGACA
JMSF013M22-           ACCAAGTTGAATTGATGAAACCAGAAACCACTGTAATTCTTCGCAACGCCAAGATCGACA
JMFF010E07-           ACCAAGTTGAATTGATGAAACCAGAAACCACTGTAATTCTTCGCAACGCCAAGATCGACA
rJMSF013M22+          ACCAAGTTGAATTGATGAAACCAGAAACCACTGTAATTCTTCGCAACGCCAAGATCGACA
rJMFF020F15+          ACCAAGTTGAATTGATGAAACCAGAAACCACTGTAATTCTTCGCAACGCCAAGATCGACA
rJMFF010E07+          ACCAAGTTGAATTGATGAAACCAGAAACCACTGTAATTCTTCGCAACGCCAAGATCGACA
                      ____________________________________________________________
consensus             ACCAAGTTGAATTGATGAAACCAGAAACCACTGTAATTCTTCGCAACGCCAAGATCGACA
 
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JMFF020F15-           TGTTTAAGGGGTCTATGAGGCTAGCCGTGGACAAATGGGGTCGAATTGAGGTAACTGAGC
JMSF013M22-           TGTTTAAGGGGTCTATGAGGCTAGCCGTGGACAAATGGGGTCGAATTGAGGTAACTGAGC
JMFF010E07-           TGTTTAAGGGGTCTATGAGGCTAGCCGTGGACAAATGGGGTCGAATTGAGGTAACTGAGC
rJMSF013M22+          TGTTTAAGGGGTCTATGAGGCTAGCCGTGGACAAATGGGGTCGAATTGAGGTAACTGAGC
rJMFF020F15+          TGTTTAAGGGGTCTATGAGGCTAGCCGTGGACAAATGGGGTCGAATTGAGGTAACTGAGC
rJMFF010E07+          TGTTTAAGGGGTCTATGAGGCTAGCCGTGGACAAATGGGGTCGAATTGAGGTAACTGAGC
                      ____________________________________________________________
consensus             TGTTTAAGGGGTCTATGAGGCTAGCCGTGGACAAATGGGGTCGAATTGAGGTAACTGAGC
 
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JMFF020F15-           CTGCAGATTTCACGGTCAAAGAAGACAACAATCTATCACTGGTCGAGTACGAGTTGGTGA
JMSF013M22-           CTGCAGATTTCACGGTCAAAG                                       
JMFF010E07-           CTGCAGATTTCACGGTCAAAGAAGACAACAATCTATCACTGGTCGAGTACGAGTTGGTGA
rJMSF013M22+          CTGCAGATTTCACGGTCAAAGAAGACAACAATCTATCACTGGTCGAGTACGAGTTGGTGA
rJMFF020F15+          CTGCAGATTTCACGGTCAAAGAAGACAACAATCTATCACTGGTCGAGTACGAGTTGGTGA
rJMFF010E07+          CTGCAGATTTCACGGTCAAAGAAGACAACAATCTATCACTGGTCGAGTACGAGTTGGTGA
                      ____________________________________________________________
consensus             CTGCAGATTTCACGGTCAAAGAAGACAACAATCTATCACTGGTCGAGTACGAGTTGGTGA
 
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JMFF020F15-           ATGTTGAAGAATAGTGTTATGTCCCTTTCGCCTCTTTTGTCTACTGGGTGAAGTTCCAAT
JMFF010E07-           ATGTTGAAGAATAGTGTTATGTCCCTTTCGCCTCTTTTGTCTACTGGGTGAAGTTCCAAT
rJMSF013M22+          ATGTTGAAGAATAGTGTTATGTCCCTTTCGCCTCTTTTGTCTACTGGGTGAAGTTCCAAT
rJMFF020F15+          ATGTTGAAGAATAGTGTTATGTCCCTTTCGCCTCTTTTGTCTACTGGGTGAAGTTCCAAT
rJMFF010E07+          ATGTTGAAGAATAGTGTTATGTCCCTTTCGCCTCTTTTGTCTACTGGGTGAAGTTCCAAT
                      ____________________________________________________________
consensus             ATGTTGAAGAATAGTGTTATGTCCCTTTCGCCTCTTTTGTCTACTGGGTGAAGTTCCAAT
 
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JMFF020F15-           TCTGGTTTTTGGGTTGGTTGA                                       
JMFF010E07-           TCTGGTTTTTGGGTTGGTTGATTATTTAA                               
rJMSF013M22+          TCTGGTTTTTGGGTTGGTTGATTATTTAAGAAGTGCGTTCTTCCTCTGTTATCTATTAAA
rJMFF020F15+          TCTGGTTTTTGGGTTGGTTGATTATTTAAGAAGTGCGTTCTTCCTCTGTTATCTATTAAA
rJMFF010E07+          TCTGGTTTTTGGGTTGGTTGATTATTTAAGAAGTGCGTTCTTCCTCTGTTATCTATTAAA
                      ____________________________________________________________
consensus             TCTGGTTTTTGGGTTGGTTGATTATTTAAGAAGTGCGTTCTTCCTCTGTTATCTATTAAA
 
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rJMSF013M22+          GATGATATCAGGTAAAAAAATGTATCTGGCTACTGGTGTTTTGTGAATGTTGAAGAAAGG
rJMFF020F15+          GATGATATCAGGTAAAAAAATGTATCTGGCTACTGGTGTTTTGTGAATGTTGAAGAAAGG
rJMFF010E07+          GATGATATCAGGTAAAAAAATGTATCTGGCTACTGGTGTTTTGTGAATGTTGAAGAAAGG
                      ____________________________________________________________
consensus             GATGATATCAGGTAAAAAAATGTATCTGGCTACTGGTGTTTTGTGAATGTTGAAGAAAGG
 
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rJMSF013M22+          GTGGAAGTGCATTTTACCACTTTTATCTATTAGGATTTAGGAGAGGGTGTTGGGTAAAAT
rJMFF020F15+          GTGGAAGTGCATTTTACCACTTTTATCTATTAGGATTTAGGAGAGGGTGTTGGGTAAAAT
rJMFF010E07+          GTGGAAGTGCATTTTACCACTTTTATCTATTAGGATTTAGGAGAGGGTGTTGGGTAAAAT
                      ____________________________________________________________
consensus             GTGGAAGTGCATTTTACCACTTTTATCTATTAGGATTTAGGAGAGGGTGTTGGGTAAAAT
 
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rJMSF013M22+          TCAGTGTTGGGTCTTGGGGTTTGGTATAGTATTTCAGTTATGGTATTTGTTTTGTGAAGA
rJMFF020F15+          TCAGTGTTGGGTCTTGGGGTTTGGTATAGTA-TTCAGTTATGGTATTTGTTTTGTGAAGA
rJMFF010E07+          TCAGTGTTGGGTCTTGGGGTTTGGTATAGTA-TTCAGTTATGGTATTTGTTTTGTGAAGA
                      ____________________________________________________________
consensus             TCAGTGTTGGGTCTTGGGGTTTGGTATAGTA-TTCAGTTATGGTATTTGTTTTGTGAAGA
 
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rJMSF013M22+          CTC                                                         
rJMFF020F15+          CTCCACTGTTACTAGGACTAATCTAATCTAAGTTTGATTAATTGGTATGTAAAAGAGATT
rJMFF010E07+          CTCCACTGTTACTAGGACTAATCTAATCTAAGTTTGATTAATTGGTATGTAAAAGAGATT
                      ____________________________________________________________
consensus             CTCCACTGTTACTAGGACTAATCTAATCTAAGTTTGATTAATTGGTATGTAAAAGAGATT
Contig 005356: SequenceBLAST Hits against nr-aa DB Show

Alignment

Contig 005356: Sequence
BLAST Hits against nr-aa DB Show
