Contig 005354:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009N02Sequence595000450 (4)ref|XP_006350514.1|7e-18PREDICTED: WD repeat-containing protein YMR102C-like [Solanum tuberosum]716005354 (2)emb|CDP05030.1|3e-35unnamed protein product [Coffea canephora]
JMFF026K04Sequence475000450 (4)ref|XP_006350514.1|7e-12PREDICTED: WD repeat-containing protein YMR102C-like [Solanum tuberosum]586005354 (2)emb|CDP05030.1|2e-28unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF009N02+              TTNTCAGGTGATGCGTCTGTTGCAGTGCNTTGGTCCGGCTTGAAATTTAGAGAGCC
                      ____________________________________________________________
consensus                 TTNTCAGGTGATGCGTCTGTTGCAGTGCNTTGGTCCGGCTTGAAATTTAGAGAGCC
 
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rJMFF009N02+          AGATAGCGGGTGTGAGTCAAATGGAGGCGATGAAACTTTAAATAGCGGTTTGCCCTTCTC
                      ____________________________________________________________
consensus             AGATAGCGGGTGTGAGTCAAATGGAGGCGATGAAACTTTAAATAGCGGTTTGCCCTTCTC
 
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rJMFF026K04+                CTCTCTGGGCCATGAATTTTTCTTGGAGGCGATTCCTAAGTGCTCTGCAACTTG
rJMFF009N02+          TTTCACCTCTCTGGGCCATGAATTTTTCTTGGAGGCGATTCCTAAGTGCTCTGCAACTTG
                      ____________________________________________________________
consensus             TTTCACCTCTCTGGGCCATGAATTTTTCTTGGAGGCGATTCCTAAGTGCTCTGCAACTTG
 
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rJMFF026K04+          GCCGGAGGAAAAGCTTCCTGTATCGAGTGCCCATAATTCACCGCCCATGTCCAAGTCTGA
rJMFF009N02+          GCCGGAGGAAAAGCTTCCTGTATCGAGTGCCCATAATTCACCGCCCATGTCCAAGTCTGA
                      ____________________________________________________________
consensus             GCCGGAGGAAAAGCTTCCTGTATCGAGTGCCCATAATTCACCGCCCATGTCCAAGTCTGA
 
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rJMFF026K04+          ATACAAGTTCCTCAAGAGCTCTTACCAAATTTCATCTTCGAGTCACGCCTGGAGTTTAGT
rJMFF009N02+          ATACAAGTTCCTCAAGAGCTCTTACCAAATTTCATCTTCGAGTCACGCCTGGAGTTTAGT
                      ____________________________________________________________
consensus             ATACAAGTTCCTCAAGAGCTCTTACCAAATTTCATCTTCGAGTCACGCCTGGAGTTTAGT
 
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rJMFF026K04+          TATTGTCACTGCAGGGTGGGATGGGCGGATTAGGTCGTTCCACAATTATGGATTGCCAGT
rJMFF009N02+          TATTGTCACTGCAGGGTGGGATGGGCGGATTAGGTCGTTCCACAATTATGGATTGCCAGT
                      ____________________________________________________________
consensus             TATTGTCACTGCAGGGTGGGATGGGCGGATTAGGTCGTTCCACAATTATGGATTGCCAGT
 
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rJMFF026K04+          ACGGCTGTAAAGAAGAGAGTGGTCAGAAAACGCGAAAATAACATTTGAGTTGGCACGCCT
rJMFF009N02+          ACGGCTGTAAAGAAGAGAGTGGTCAGAAAACGCGAAAATAACATTTGAGTTGGCACGCCT
                      ____________________________________________________________
consensus             ACGGCTGTAAAGAAGAGAGTGGTCAGAAAACGCGAAAATAACATTTGAGTTGGCACGCCT
 
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rJMFF026K04+          CAATGCTGCCGAAGCATGCATGTGATCTGGTCGTTCGAGAGAGAGAGTTGCAGGGCAGAG
rJMFF009N02+          CAATGCTGCCGAAGCATGCATGTGATCTGGTCGTTCGAGAGAGAGAGTTGCAGGGCAGAG
                      ____________________________________________________________
consensus             CAATGCTGCCGAAGCATGCATGTGATCTGGTCGTTCGAGAGAGAGAGTTGCAGGGCAGAG
 
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rJMFF026K04+          GAGGCGTACGGAATGGCTCCATTTGGGTCCCTTGGGATATACATACATATATACATACAA
rJMFF009N02+          GAGGCGTACGGAATGGCTCCATTTGGGTCCCTTGGGATATACATACATATATACATACAA
                      ____________________________________________________________
consensus             GAGGCGTACGGAATGGCTCCATTTGGGTCCCTTGGGATATACATACATATATACATACAA
 
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rJMFF026K04+          ACAACATGAGATTGCTGGTAGAGAGGGGAGTTTGTTTGATGTGGCCACTCAATCTCATTG
rJMFF009N02+          ACAACATGAGATTGCTGGTAGAGAGGGGAGTTTGTTTGATGTGGCCACTCAATCTCATTG
                      ____________________________________________________________
consensus             ACAACATGAGATTGCTGGTAGAGAGGGGAGTTTGTTTGATGTGGCCACTCAATCTCATTG
 
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rJMFF026K04+          AGATAAGCCAAACACTCATCTCAGTTTGTATGTATGTATGTATGCATGTATTATTTGATT
rJMFF009N02+          AGATAAGCCAAACACTCATCTCAGTTTGTATGTATGTATGTATGCATGTATTATTTGATT
                      ____________________________________________________________
consensus             AGATAAGCCAAACACTCATCTCAGTTTGTATGTATGTATGTATGCATGTATTATTTGATT
 
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rJMFF026K04+          TGGTTAGTTGGATGTGTGAAAGGGGGCCTAGAGAAATAAATAGAGATAAGGA        
rJMFF009N02+          TGGTTAGTTGGATGTGTGAAAGGGGGCCTAGAGAAATAAATAGAGATAAGGATGAGGGGT
                      ____________________________________________________________
consensus             TGGTTAGTTGGATGTGTGAAAGGGGGCCTAGAGAAATAAATAGAGATAAGGATGAGGGGT