Contig 005353:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF040K03+                                                           GTGAAGGAGAT
                      ____________________________________________________________
consensus                                                              GTGAAGGAGAT
 
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rJMFF040K03+          CGCTATTGCTTTAGAGCGTAGCGGGGAAGAGGTTCTTGTGGACACTGAGGTGTATGCCGG
                      ____________________________________________________________
consensus             CGCTATTGCTTTAGAGCGTAGCGGGGAAGAGGTTCTTGTGGACACTGAGGTGTATGCCGG
 
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rJMFF040K03+          AAAAGGGTTCTCTTATTCCCGGGGAATACAGCGATCCCGGAGAAGTCTTGCCGAATGGGG
rJMFF009M01+                                GGAATACAGCGATCCCGGAGAAGTCTTGCCGAAT-GGG
                      ____________________________________________________________
consensus             AAAAGGGTTCTCTTATTCCCGGGGAATACAGCGATCCCGGAGAAGTCTTGCCGAATGGGG
 
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rJMFF040K03+          TTCTTGGAAAGGACACAAGGAGTAGGGAAAGTGATTGGGTGGGCTCCCCAGGTGGCCATA
rJMFF009M01+          TTCTTGGAAAGGACACAAGGAGTAGGGAAAGTGATTGGGTGGGCTCCCCAGGTGGCCATA
                      ____________________________________________________________
consensus             TTCTTGGAAAGGACACAAGGAGTAGGGAAAGTGATTGGGTGGGCTCCCCAGGTGGCCATA
 
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rJMFF040K03+          CTGAGCCACCCGGGGGTCGGGGGCTTCGTTTCACATTGNGGGTGGAATTCGACACTCGAG
rJMFF009M01+          CTGAGCCACCCGGGGGTCGGGGGCTTCGTTTCACATTGCGGGTGGAATTCGACACTCGAG
                      ____________________________________________________________
consensus             CTGAGCCACCCGGGGGTCGGGGGCTTCGTTTCACATTGCGGGTGGAATTCGACACTCGAG
 
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rJMFF040K03+          AGCATCTGGTTCGGGAAGCCAATGGCGGCATGGCCTATTGCCGCGGAGCAACAAGCCAAT
rJMFF009M01+          AGCATCTGGTTCGGGAAGCCAATGGCGGCATGGCCTATTGCCGCGGAGCAACAAGCCAAT
                      ____________________________________________________________
consensus             AGCATCTGGTTCGGGAAGCCAATGGCGGCATGGCCTATTGCCGCGGAGCAACAAGCCAAT
 
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rJMFF040K03+          GCGTTTCAAATAGTGAAGGAGATAGGAATAGGGGTAGATCTTAAGATGGATTACAAGAGG
rJMFF009M01+          GCGTTTCAAATAGTGAAGGAGATAGGAATAGGGGTAGATCTTAAGATGGATTACAAGAGG
                      ____________________________________________________________
consensus             GCGTTTCAAATAGTGAAGGAGATAGGAATAGGGGTAGATCTTAAGATGGATTACAAGAGG
 
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rJMFF040K03+          GATTTCAAGGATGCAACCAAATTTTCAGAAATGGTGAGGGCGGAGGAGATAGAAAGGGGA
rJMFF009M01+          GATTTCAAGGATGCAACCAAATTTTCAGAAATGGTGAGGGCGGAGGAGATAGAAAGGGGA
                      ____________________________________________________________
consensus             GATTTCAAGGATGCAACCAAATTTTCAGAAATGGTGAGGGCGGAGGAGATAGAAAGGGGA
 
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rJMFF040K03+          ATCAGGAGTGTTATGGATCCTCTAAATCCCATTAGGTTGAAGGCCAAAGAAATGAGTGAA
rJMFF009M01+          ATCAGGAGTGTTATGGATCCTCTAAATCCCATTAGGTTGAAGGCCAAAGAAATGAGTGAA
                      ____________________________________________________________
consensus             ATCAGGAGTGTTATGGATCCTCTAAATCCCATTAGGTTGAAGGCCAAAGAAATGAGTGAA
 
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rJMFF040K03+          AAGAGCAGATCAGCCATAGTGGAGGGTGGCTCATCCTACACTAATGTTGGGCGGTTCATC
rJMFF009M01+          AAGAGCAGATCAGCCATAGTGGAGGGTGGCTCATCCTACACTAATGTTGGGCGGTTCATC
                      ____________________________________________________________
consensus             AAGAGCAGATCAGCCATAGTGGAGGGTGGCTCATCCTACACTAATGTTGGGCGGTTCATC
 
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rJMFF040K03+          CAGGATGTCTTCAGCAACATCAATTAATATATAGTTTGTCTAGCTTGCTTGGTTTTGAAC
rJMFF009M01+          CAGGATGTCTTCAGCAACATCAATTAATATATAGTTTGTCTAGCTTGCTTGGTTTTGAAC
                      ____________________________________________________________
consensus             CAGGATGTCTTCAGCAACATCAATTAATATATAGTTTGTCTAGCTTGCTTGGTTTTGAAC
 
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rJMFF040K03+          CAGGGTAGCAATCATTAATTTTCTTCTAGTTTCTAGAGTTCTCAATGATATGCATGCTAA
rJMFF009M01+          CAGGGTAGCAATCATTAATTTTCTTCTAGTTTCTAGAGTTCTCAATGATATGCATGCTAA
                      ____________________________________________________________
consensus             CAGGGTAGCAATCATTAATTTTCTTCTAGTTTCTAGAGTTCTCAATGATATGCATGCTAA
 
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rJMFF040K03+          TAAGGTTAAAAAGTTTAAAACTAATTTGTACTATCAAGAAGAGAGTCT            
rJMFF009M01+          TAAGGTTAAAAAGTTTAAAACTAATTTGTACTATCAAGAAGAGAGTCTGAGCAAGTAATG
                      ____________________________________________________________
consensus             TAAGGTTAAAAAGTTTAAAACTAATTTGTACTATCAAGAAGAGAGTCTGAGCAAGTAATG