Contig 005351:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L08Sequence578010580 (7)ref|XP_006357223.1|2e-57PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]684005351 (8)ref|XP_009602624.1|3e-69PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMFF015J16Sequence561010580 (7)ref|XP_006357223.1|9e-54PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]753005351 (8)ref|XP_009602624.1|4e-90PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMFS130G08Sequence629005351 (8)ref|XP_009799074.1|6e-113PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana sylvestris]
JMSF005B13Sequence262010580 (7)ref|XP_006357223.1|1e-06PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]269005351 (8)
JMSF007E21Sequence343010580 (7)ref|XP_006357223.1|6e-15PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]796005351 (8)ref|XP_009602624.1|1e-108PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMSF011F21Sequence341010580 (7)ref|XP_006357223.1|3e-14PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]804005351 (8)ref|XP_009602624.1|2e-108PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMSF037B22Sequence694010580 (7)ref|XP_006357223.1|4e-79PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]607005351 (8)ref|XP_009602624.1|4e-62PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform
JMSF040J02Sequence654010580 (7)ref|XP_006357223.1|3e-69PREDICTED: probable inactive receptor kinase At1g27190-like [Solanum tuberosum]836005351 (8)ref|XP_009602624.1|5e-111PREDICTED: probable inactive receptor kinase At1g27190 [Nicotiana tomentosiform

Alignment

This contig is upended


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JMFS130G08-                   GTTTGGTTGAGAATGAGAAGCTTTTGGTGTATAAGCATATGCCTAATGGTAG
                      ____________________________________________________________
consensus                     GTTTGGTTGAGAATGAGAAGCTTTTGGTGTATAAGCATATGCCTAATGGTAG
 
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JMFS130G08-           CTTATATTCGGCTTTGCACGGGAGCCTTTGTACTGGTGTTAGGAACAATAGATATGAGCT
rJMSF040J02+                                               GTTAGGAACAATAGATATGAGCT
                      ____________________________________________________________
consensus             CTTATATTCGGCTTTGCACGGGAGCCTTTGTACTGGTGTTAGGAACAATAGATATGAGCT
 
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JMFS130G08-           TGG-TTGGCAATCTAGGCTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
rJMSF040J02+          TGGTTTGGCAATNTAGGCTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
rJMSF007E21+                           CTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
rJMSF011F21+                           CTTAGGATAGCTGTTGGTGCAGCCAGAGGGCTTGCTTGGCTGC
                      ____________________________________________________________
consensus             TGGTTTGGCAATCTAGGCTTAGGATAGCTGTTGGTGCAGCAAGAGGGCTTGCTTGGCTGC
 
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JMFS130G08-           ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMSF040J02+          ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMSF007E21+          ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMSF011F21+          ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
rJMFF015J16+                                   GCATCAATACATTAGCTCGAATGTGATTCTAGTGG
                      ____________________________________________________________
consensus             ATCATGGCTGCCAACCGCCCTATTTGCATCAATACATTAGCTCGAATGTGATTCTAGTGG
 
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JMFS130G08-           ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMSF040J02+          ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMSF007E21+          ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMSF011F21+          ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMFF015J16+          ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
rJMFF008L08+                                             CTTGCCAGGCTCGTTAAATCAGCTG
                      ____________________________________________________________
consensus             ACGATGATCTTGATGCTAGGATAACTGATTTTGGCCTTGCCAGGCTCGTTAAATCAGCTG
 
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JMFS130G08-           ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF040J02+          ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF007E21+          ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF011F21+          ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMSF037B22+                                                   ATTCGGGTATGTTGCTCCT
rJMFF015J16+          ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
rJMFF008L08+          ACTCCCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
                      ____________________________________________________________
consensus             ACT-CCAATGATGGTTCTTTTGTCAATGGCGGTCTTGGGGAATTCGGGTATGTTGCTCCT
 
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JMFS130G08-           GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF040J02+          GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF007E21+          GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF011F21+          GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMSF037B22+          GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMFF015J16+          GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
rJMFF008L08+          GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
                      ____________________________________________________________
consensus             GAATACTCGAGCACTCTGGTTGCATCGACAAAAGGAGATGTCTATAGTTTTGGGGTTGTG
 
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JMFS130G08-           CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF040J02+          CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF007E21+          CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF011F21+          CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMSF037B22+          CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMFF015J16+          CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
rJMFF008L08+          CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
                      ____________________________________________________________
consensus             CTGCTGGAGCTGGTGAGTGGGCAGAAGCCTCTTGGAGCAGGCAATGCACAGGAAGGGTTC
 
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JMFS130G08-           AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF040J02+          AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF007E21+          AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF011F21+          AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMSF037B22+          AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMFF015J16+          AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
rJMFF008L08+          AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
                      ____________________________________________________________
consensus             AAGGGGAGCCTAGTGGATTGGGTTAGTCATCTCTTAGTCTCGGGCCGAAGTAGGGATGCC
 
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JMFS130G08-           ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF040J02+          ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF007E21+          ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF011F21+          ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMSF037B22+          ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMFF015J16+          ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
rJMFF008L08+          ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
                      ____________________________________________________________
consensus             ATAGACAAACACCTTGTTGGGGGAGGACAGGAAGATGAAATCATGCAGGTTTTGAGGATT
 
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JMFS130G08-           GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCT                     
rJMSF040J02+          GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMSF005B13+                                                                    AG
rJMSF007E21+          GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMSF011F21+          GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMSF037B22+          GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMFF015J16+          GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
rJMFF008L08+          GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
                      ____________________________________________________________
consensus             GCTTGCTCCTGTGTAGCTCCAAGACCAAAGGATAGGCCTTCTATGTACACTGTTTACCAG
 
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rJMSF040J02+          TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMSF005B13+          TCNTTGAAGACCATGGGTGACAAACATGGTCTCTCTGANCAANTTGATCATGAGTNTCCA
rJMSF007E21+          TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMSF011F21+          TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMSF037B22+          TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMFF015J16+          TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
rJMFF008L08+          TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
                      ____________________________________________________________
consensus             TCCTTGAAGACCATGGCTGACAAACATGGTCTCTCTGAACAATTTGATCATGAGTTTCCA
 
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rJMSF040J02+          ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMSF005B13+          ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCNGCAACCAAAGAT
rJMSF007E21+          ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMSF011F21+          ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMSF037B22+          ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMFF015J16+          ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
rJMFF008L08+          ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
                      ____________________________________________________________
consensus             ATGAACTTTGGAAAACAAGATGACAATCCAAAGGACTAGATTGCTCCTGCAACCAAAGAT
 
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rJMSF040J02+          TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF005B13+          TAAGCATCATCATATTGTNTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF007E21+          TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF011F21+          TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMSF037B22+          TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMFF015J16+          TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
rJMFF008L08+          TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
                      ____________________________________________________________
consensus             TAAGCATCATCATATTGTCTCTTATCAGATGAACCTCAATTATTATGATGCCATGTTACC
 
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rJMSF040J02+          CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMSF005B13+          CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGAGCT
rJMSF007E21+          CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMSF011F21+          CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMSF037B22+          CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMFF015J16+          CAAACCTTTCTACTGCCGAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
rJMFF008L08+          CAAACCTTTCTACTGCCGAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
                      ____________________________________________________________
consensus             CAAACCTTTCTACTGCCAAGAGGTAATTCTCCTTTCTATTGTCCATCAAATTGTTGA-CT
 
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rJMSF040J02+          ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC                         
rJMSF005B13+          ATGTATACTAGAAAATCAAAAGCTCAA                                 
rJMSF007E21+          ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC                         
rJMSF011F21+          ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC                         
rJMSF037B22+          ATGTATACTAGAAAATCAAAAGCTCAATGGCATCC                         
rJMFF015J16+          ATGTATACTAGAAAATCAAAAGCTCAATGGCATCCTGGCATCTGGTTTCT          
rJMFF008L08+          ATGTATACTAGAAAATCAAAAGCTCAATGGCATCCTGGCATCTGGTTTCTTGACAGAAAT
                      ____________________________________________________________
consensus             ATGTATACTAGAAAATCAAAAGCTCAATGGCATCCTGGCATCTGGTTTCTTGACAGAAAT