Contig 005347:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008H06Sequence584005347 (11)ref|XP_009763651.1|89.7PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]678005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF009J20Sequence298005347 (11)ref|XP_003633339.1|53.5PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera]576005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF010B10Sequence514005347 (11)ref|XP_009763651.1|95.5PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF018K23Sequence299005347 (11)ref|XP_003633339.1|53.9PREDICTED: uncharacterized protein LOC100853006 [Vitis vinifera]
JMSF019J20Sequence302005347 (11)624005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF022E09Sequence657023187ref|XP_004235216.1|145PREDICTED: uncharacterized protein LOC101251760 [Solanum lycopersicum]620005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]
JMSF025O08Sequence586005347 (11)ref|XP_009763651.1|89.7PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]619005347 (11)ref|XP_009763651.1|95.9PREDICTED: uncharacterized protein LOC104215531 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF009J20-                           GAACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMSF018K23-                            AACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMSF019J20-                            AACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMFF008H06-                            AACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
JMSF025O08-                             ACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
rJMSF025O08+                                                              TCGGAACA
rJMSF022E09+                                                                GGAACA
rJMSF019J20+                                                            AATCGGAACA
rJMSF009J20+                                                               CGGAACA
rJMFF008H06+                                                  TACTGCTTCGAATCGGAACA
                      ____________________________________________________________
consensus                             GAACAGCTCCGACTGGGTGATCTCTACTGCTTCGAATCGGAACA
 
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JMSF009J20-           ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
JMSF018K23-           ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG--AAAAAAAAACCAGAACAATAT
JMSF019J20-           ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAGAAAAAAAAAAACCAGAACAATAT
JMFF008H06-           ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
JMSF025O08-           ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMSF025O08+          ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMSF022E09+          ATCCNTGAAATTTGTNGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMSF010B10+                                                AAAAAAAAAACCAGAACAATAT
rJMSF019J20+          ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAGAAAAAAAAAAACCAGAACAATAT
rJMSF009J20+          ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
rJMFF008H06+          ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
                      ____________________________________________________________
consensus             ATCCTTGAAATTTGTAGAACAAGGCTTAAAGGAAAAG-AAAAAAAAAACCAGAACAATAT
 
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JMSF009J20-           GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
JMSF018K23-           GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
JMSF019J20-           GAGTTTGAACCGNGTTTGGGTGGCGGCGGGTGTCNCCTTCGTTAATAACCNCTCCGATCA
JMFF008H06-           GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
JMSF025O08-           GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF025O08+          GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF022E09+          GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF010B10+          GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF019J20+          GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMSF009J20+          GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
rJMFF008H06+          GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
                      ____________________________________________________________
consensus             GAGTTTGAACCGTGTTTGGGTGGCGGCGGGTGTCGCCTTCGTTAATAACCACTCCGATCA
 
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JMSF009J20-           AGGTCANAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
JMSF018K23-           AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
JMSF019J20-           AGGTCANAAACTGAAGTCTGGCCTCANATCCCTTCAGCAAACCAAAAAANGCTTTTCTTC
JMFF008H06-           AGGTCANAAACTGAAGTCTGGCCTCANATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
JMSF025O08-           AGGTCANAAACTGAAGTCTGGCCTCANATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF025O08+          AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF022E09+          AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF010B10+          AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF019J20+          AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMSF009J20+          AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
rJMFF008H06+          AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
                      ____________________________________________________________
consensus             AGGTCAGAAACTGAAGTCTGGCCTCAGATCCCTTCAGCAAACCAAAAAATGCTTTTCTTC
 
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JMSF009J20-           TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
JMSF018K23-           TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
JMSF019J20-           TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCNATCTCCGGCCTCTTTCCGGCTCCNA
JMFF008H06-           TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
JMSF025O08-           TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF025O08+          TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF022E09+          TTNTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF010B10+          TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF019J20+          TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMSF009J20+          TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
rJMFF008H06+          TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
                      ____________________________________________________________
consensus             TTCTTCTTCTTCTTCTTCTTCATCTTCCGCATCCGATCTCCGGCCTCTTTCCGGCTCCGA
 
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JMSF009J20-           TCTTGGAGGGTTCGT                                             
JMSF018K23-           TCTTGGAGGGTTCGTCG                                           
JMSF019J20-           TCTTGGAGGGTTCGTCGG                                          
JMFF008H06-           TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGANAGGAGCGGATTAGGCAGGCCGATGACTC
JMSF025O08-           TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGANAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF025O08+          TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF022E09+          TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF010B10+          TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF019J20+          TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMSF009J20+          TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
rJMFF008H06+          TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
                      ____________________________________________________________
consensus             TCTTGGAGGGTTCGTCGGAAGCGGGAGCGGAGAGGAGCGGATTAGGCAGGCCGATGACTC
 
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JMFF008H06-           GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
JMSF025O08-           GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF025O08+          GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF022E09+          GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF010B10+          GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF019J20+          GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMSF009J20+          GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
rJMFF008H06+          GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
                      ____________________________________________________________
consensus             GCTCAGGCAAGTCATGTACTTCAACTGTTGGGGACAGGGTTAACGAGGCGCGGCGTTTCC
 
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JMFF008H06-           AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
JMSF025O08-           AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF025O08+          AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF022E09+          AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF010B10+          AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF019J20+          AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMSF009J20+          AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
rJMFF008H06+          AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
                      ____________________________________________________________
consensus             AGCCGCTATAAAACAACACAACGGAGTAGTTTGCCGTTGACCGGAACTTGTTACGGCGTT
 
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JMFF008H06-           GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
JMSF025O08-           GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF025O08+          GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF022E09+          GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF010B10+          GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF019J20+          GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMSF009J20+          GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
rJMFF008H06+          GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
                      ____________________________________________________________
consensus             GAAACATCGCCGGCGGTGGGTTGACCCGGACAGAGATGGCTGAAAATGAGCTGAGCCTAC
 
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JMFF008H06-           AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
JMSF025O08-           AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF025O08+          AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF022E09+          AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF010B10+          AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF019J20+          AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
rJMSF009J20+          AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATTCCCTT
rJMFF008H06+          AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
                      ____________________________________________________________
consensus             AGATCCGGGTGGGCAAAATCGTCAGTTTCTGGAATTGCAACGCTAAATGTAAATT-CCTT
 
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JMFF008H06-           GTA                                                         
JMSF025O08-           GTAT                                                        
rJMSF025O08+          GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
rJMSF022E09+          GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
rJMSF010B10+          GTATAGTT                                                    
rJMSF019J20+          GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
rJMSF009J20+          GTATAGTTTAGTAGAATGTATATATGTCTT                              
rJMFF008H06+          GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
                      ____________________________________________________________
consensus             GTATAGTTTAGTAGAATGTATATATGTCTTTCTTTCTCAAATCAATGAACATAAAGCTAT
 
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rJMSF025O08+          ACAAAATGATGGT                                               
rJMSF022E09+          ACAAAATGATGGT                                               
rJMSF019J20+          ACAAAATGATGGT                                               
rJMFF008H06+          ACAAAATGATGGTTGTATCTTTTGTAGTGCATAATAATAATATGTTCTAATGACCAAATC
                      ____________________________________________________________
consensus             ACAAAATGATGGTTGTATCTTTTGTAGTGCATAATAATAATATGTTCTAATGACCAAATC